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Moc02g14340 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc02g14340
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionPentatricopeptide repeat-containing protein
Genome locationchr2:10620642..10621007
RNA-Seq ExpressionMoc02g14340
SyntenyMoc02g14340
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022155459.1 pentatricopeptide repeat-containing protein At3g54980, mitochondrial isoform X1 [Momordica charantia]3.0e-4990.65Show/hide
Query:  MIVKGISPNAISYNNMILDHCKKGDIKAACKVYKEMLDNDFTPNVVTFYILMDGYFKKGDIDNALGIFHMMMDANILPTDITLGIIIKGLCKAGRTSEGR
        MIVKGISPNA+SYNNMIL HCKKGDI +ACK+YKEMLDN FTPNVVTF ILMDGYF KGDI+NA GIFHMMMDANILPTDITLGIIIKGLCKAGRTSEGR
Subjt:  MIVKGISPNAISYNNMILDHCKKGDIKAACKVYKEMLDNDFTPNVVTFYILMDGYFKKGDIDNALGIFHMMMDANILPTDITLGIIIKGLCKAGRTSEGR

Query:  DMFNKFV
        DMFNKFV
Subjt:  DMFNKFV

XP_022157865.1 pentatricopeptide repeat-containing protein At3g54980, mitochondrial-like [Momordica charantia]8.7e-4990.65Show/hide
Query:  MIVKGISPNAISYNNMILDHCKKGDIKAACKVYKEMLDNDFTPNVVTFYILMDGYFKKGDIDNALGIFHMMMDANILPTDITLGIIIKGLCKAGRTSEGR
        MIVKGISPNA+SYNNMIL HCK G+I AACKVYKEMLDN FTPNVVTF ILMDGYFKKGDI+NA GIFHMMMDANILPTDITLGIIIKGLCK GRTSEGR
Subjt:  MIVKGISPNAISYNNMILDHCKKGDIKAACKVYKEMLDNDFTPNVVTFYILMDGYFKKGDIDNALGIFHMMMDANILPTDITLGIIIKGLCKAGRTSEGR

Query:  DMFNKFV
        DMFNKFV
Subjt:  DMFNKFV

XP_022947267.1 pentatricopeptide repeat-containing protein At3g54980, mitochondrial-like [Cucurbita moschata]9.0e-4685.98Show/hide
Query:  MIVKGISPNAISYNNMILDHCKKGDIKAACKVYKEMLDNDFTPNVVTFYILMDGYFKKGDIDNALGIFHMMMDANILPTDITLGIIIKGLCKAGRTSEGR
        +IVKGISPNA+SYN MIL HC+KG+I  ACKVYK+MLDN FTPNVVTF ILMDGYFKKGDIDNA  IFH M+DANILPTDITLGIIIKGLCKAGRTSEGR
Subjt:  MIVKGISPNAISYNNMILDHCKKGDIKAACKVYKEMLDNDFTPNVVTFYILMDGYFKKGDIDNALGIFHMMMDANILPTDITLGIIIKGLCKAGRTSEGR

Query:  DMFNKFV
        DMFNKFV
Subjt:  DMFNKFV

XP_023007118.1 pentatricopeptide repeat-containing protein At3g54980, mitochondrial-like [Cucurbita maxima]2.0e-4585.05Show/hide
Query:  MIVKGISPNAISYNNMILDHCKKGDIKAACKVYKEMLDNDFTPNVVTFYILMDGYFKKGDIDNALGIFHMMMDANILPTDITLGIIIKGLCKAGRTSEGR
        +IVKGISPNA+SYN MIL HC+KG++  ACKVYKEM DN FTPNVVTF ILMDGYFKKGDIDNA  IFH M+DANILPTDITLGIIIKGLCKAGRTSEGR
Subjt:  MIVKGISPNAISYNNMILDHCKKGDIKAACKVYKEMLDNDFTPNVVTFYILMDGYFKKGDIDNALGIFHMMMDANILPTDITLGIIIKGLCKAGRTSEGR

Query:  DMFNKFV
        DMFNKFV
Subjt:  DMFNKFV

XP_023533005.1 pentatricopeptide repeat-containing protein At3g54980, mitochondrial-like [Cucurbita pepo subsp. pepo]3.4e-4585.05Show/hide
Query:  MIVKGISPNAISYNNMILDHCKKGDIKAACKVYKEMLDNDFTPNVVTFYILMDGYFKKGDIDNALGIFHMMMDANILPTDITLGIIIKGLCKAGRTSEGR
        +IV+GISPNA+SYN MIL HC+KG+I  ACKVYKEMLDN FTPN VTF ILMDGYFKKGDIDNA  IFH M DANILPTDITLGIIIKGLCKAGRTSEGR
Subjt:  MIVKGISPNAISYNNMILDHCKKGDIKAACKVYKEMLDNDFTPNVVTFYILMDGYFKKGDIDNALGIFHMMMDANILPTDITLGIIIKGLCKAGRTSEGR

Query:  DMFNKFV
        DMFNKFV
Subjt:  DMFNKFV

TrEMBL top hitse value%identityAlignment
A0A1S4E1T8 pentatricopeptide repeat-containing protein At3g54980, mitochondrial isoform X25.3e-4481.31Show/hide
Query:  MIVKGISPNAISYNNMILDHCKKGDIKAACKVYKEMLDNDFTPNVVTFYILMDGYFKKGDIDNALGIFHMMMDANILPTDITLGIIIKGLCKAGRTSEGR
        +I KGISPN +SYNN+IL HC+K +I AACKVYKEMLDN FTPN VTF ILMDGYFKKGDI+NA  IFH M DANILPTDITLGIIIKGLCK GRTSEGR
Subjt:  MIVKGISPNAISYNNMILDHCKKGDIKAACKVYKEMLDNDFTPNVVTFYILMDGYFKKGDIDNALGIFHMMMDANILPTDITLGIIIKGLCKAGRTSEGR

Query:  DMFNKFV
        D+FNKFV
Subjt:  DMFNKFV

A0A6J1DPE9 pentatricopeptide repeat-containing protein At3g54980, mitochondrial isoform X11.4e-4990.65Show/hide
Query:  MIVKGISPNAISYNNMILDHCKKGDIKAACKVYKEMLDNDFTPNVVTFYILMDGYFKKGDIDNALGIFHMMMDANILPTDITLGIIIKGLCKAGRTSEGR
        MIVKGISPNA+SYNNMIL HCKKGDI +ACK+YKEMLDN FTPNVVTF ILMDGYF KGDI+NA GIFHMMMDANILPTDITLGIIIKGLCKAGRTSEGR
Subjt:  MIVKGISPNAISYNNMILDHCKKGDIKAACKVYKEMLDNDFTPNVVTFYILMDGYFKKGDIDNALGIFHMMMDANILPTDITLGIIIKGLCKAGRTSEGR

Query:  DMFNKFV
        DMFNKFV
Subjt:  DMFNKFV

A0A6J1DVN2 pentatricopeptide repeat-containing protein At3g54980, mitochondrial-like4.2e-4990.65Show/hide
Query:  MIVKGISPNAISYNNMILDHCKKGDIKAACKVYKEMLDNDFTPNVVTFYILMDGYFKKGDIDNALGIFHMMMDANILPTDITLGIIIKGLCKAGRTSEGR
        MIVKGISPNA+SYNNMIL HCK G+I AACKVYKEMLDN FTPNVVTF ILMDGYFKKGDI+NA GIFHMMMDANILPTDITLGIIIKGLCK GRTSEGR
Subjt:  MIVKGISPNAISYNNMILDHCKKGDIKAACKVYKEMLDNDFTPNVVTFYILMDGYFKKGDIDNALGIFHMMMDANILPTDITLGIIIKGLCKAGRTSEGR

Query:  DMFNKFV
        DMFNKFV
Subjt:  DMFNKFV

A0A6J1G5Y6 pentatricopeptide repeat-containing protein At3g54980, mitochondrial-like4.3e-4685.98Show/hide
Query:  MIVKGISPNAISYNNMILDHCKKGDIKAACKVYKEMLDNDFTPNVVTFYILMDGYFKKGDIDNALGIFHMMMDANILPTDITLGIIIKGLCKAGRTSEGR
        +IVKGISPNA+SYN MIL HC+KG+I  ACKVYK+MLDN FTPNVVTF ILMDGYFKKGDIDNA  IFH M+DANILPTDITLGIIIKGLCKAGRTSEGR
Subjt:  MIVKGISPNAISYNNMILDHCKKGDIKAACKVYKEMLDNDFTPNVVTFYILMDGYFKKGDIDNALGIFHMMMDANILPTDITLGIIIKGLCKAGRTSEGR

Query:  DMFNKFV
        DMFNKFV
Subjt:  DMFNKFV

A0A6J1L247 pentatricopeptide repeat-containing protein At3g54980, mitochondrial-like9.7e-4685.05Show/hide
Query:  MIVKGISPNAISYNNMILDHCKKGDIKAACKVYKEMLDNDFTPNVVTFYILMDGYFKKGDIDNALGIFHMMMDANILPTDITLGIIIKGLCKAGRTSEGR
        +IVKGISPNA+SYN MIL HC+KG++  ACKVYKEM DN FTPNVVTF ILMDGYFKKGDIDNA  IFH M+DANILPTDITLGIIIKGLCKAGRTSEGR
Subjt:  MIVKGISPNAISYNNMILDHCKKGDIKAACKVYKEMLDNDFTPNVVTFYILMDGYFKKGDIDNALGIFHMMMDANILPTDITLGIIIKGLCKAGRTSEGR

Query:  DMFNKFV
        DMFNKFV
Subjt:  DMFNKFV

SwissProt top hitse value%identityAlignment
O04504 Pentatricopeptide repeat-containing protein At1g098204.1e-1740Show/hide
Query:  MIVKGISPNAISYNNMILDHCK---KGDIKAACKVYKEMLDNDFTPNVVTFYILMDGYFKKGDIDNALGIFHMMMDANILPTDITLGIIIKGLCKAGRTS
        M V G SPN +SYN +I  +CK    G +  A  V KEM++ND +PN+ TF IL+DG++K  ++  ++ +F  M+D ++ P  I+   +I GLC  G+ S
Subjt:  MIVKGISPNAISYNNMILDHCK---KGDIKAACKVYKEMLDNDFTPNVVTFYILMDGYFKKGDIDNALGIFHMMMDANILPTDITLGIIIKGLCKAGRTS

Query:  EGRDMFNKFV
        E   M +K V
Subjt:  EGRDMFNKFV

O80958 Pentatricopeptide repeat-containing protein At2g39230, mitochondrial4.8e-1838.46Show/hide
Query:  KGISPNAISYNNMILDHCKKGDIKAACKVYKEMLDNDFTPNVVTFYILMDGYFKKGDIDNALGIFHMMMDANILPTDITLGIIIKGLCKAGRTSEGRDMF
        KGI PN + YNNM+L HC+  ++  A  ++ EML+    PN  T+ IL+DG+FK  D  NA  + + M  +N    ++    II GLCK G+TS+ ++M 
Subjt:  KGISPNAISYNNMILDHCKKGDIKAACKVYKEMLDNDFTPNVVTFYILMDGYFKKGDIDNALGIFHMMMDANILPTDITLGIIIKGLCKAGRTSEGRDMF

Query:  NKFV
           +
Subjt:  NKFV

Q0WVK7 Pentatricopeptide repeat-containing protein At1g05670, mitochondrial2.2e-1534.91Show/hide
Query:  MIVKGISPNAISYNNMILDHCKKGDIKAACKVYKEMLDNDFTPNVVTFYILMDGYFKKGDIDNALGIFHMMMDANILPTDITLGIIIKGLCKAGRTSEGR
        M  KG+ P+++++  +I  +CK G +K A +V+  M+    +PNVVT+  L+DG  K+GD+D+A  + H M    + P   T   I+ GLCK+G   E  
Subjt:  MIVKGISPNAISYNNMILDHCKKGDIKAACKVYKEMLDNDFTPNVVTFYILMDGYFKKGDIDNALGIFHMMMDANILPTDITLGIIIKGLCKAGRTSEGR

Query:  DMFNKF
         +  +F
Subjt:  DMFNKF

Q9C6S6 Putative pentatricopeptide repeat-containing protein At1g318402.9e-1537.76Show/hide
Query:  MIVKGISPNAISYNNMILDHCKKGDIKAACKVYKEMLDNDFTPNVVTFYILMDGYFKKGDIDNALGIFHMMMDANILPTDITLGIIIKGLCKAGRTSE
        M  KG  PNA++Y  ++    K  DI+ + K+++EM +   +P++V++ I++DG  K+G +D A  IFH  +DA +LP  +   I+I+G CK GR  E
Subjt:  MIVKGISPNAISYNNMILDHCKKGDIKAACKVYKEMLDNDFTPNVVTFYILMDGYFKKGDIDNALGIFHMMMDANILPTDITLGIIIKGLCKAGRTSE

Q9SV46 Pentatricopeptide repeat-containing protein At3g54980, mitochondrial2.6e-1637.5Show/hide
Query:  KGISPNAISYNNMILDHCKKGDIKAACKVYKEMLDNDFTPNVVTFYILMDGYFKKGDIDNALGIFHMMMDANILPTDITLGIIIKGLCKAGRTSEGRDMF
        +GI PN +SYNN++L HC++ ++  A  V+  +L+    PN  T+ IL+DG F+  D  NAL + + M  +NI    +    II GLCK G+TS+ R++ 
Subjt:  KGISPNAISYNNMILDHCKKGDIKAACKVYKEMLDNDFTPNVVTFYILMDGYFKKGDIDNALGIFHMMMDANILPTDITLGIIIKGLCKAGRTSEGRDMF

Query:  NKFV
           +
Subjt:  NKFV

Arabidopsis top hitse value%identityAlignment
AT1G05670.1 Pentatricopeptide repeat (PPR-like) superfamily protein1.6e-1634.91Show/hide
Query:  MIVKGISPNAISYNNMILDHCKKGDIKAACKVYKEMLDNDFTPNVVTFYILMDGYFKKGDIDNALGIFHMMMDANILPTDITLGIIIKGLCKAGRTSEGR
        M  KG+ P+++++  +I  +CK G +K A +V+  M+    +PNVVT+  L+DG  K+GD+D+A  + H M    + P   T   I+ GLCK+G   E  
Subjt:  MIVKGISPNAISYNNMILDHCKKGDIKAACKVYKEMLDNDFTPNVVTFYILMDGYFKKGDIDNALGIFHMMMDANILPTDITLGIIIKGLCKAGRTSEGR

Query:  DMFNKF
         +  +F
Subjt:  DMFNKF

AT1G05670.2 Pentatricopeptide repeat (PPR-like) superfamily protein1.6e-1634.91Show/hide
Query:  MIVKGISPNAISYNNMILDHCKKGDIKAACKVYKEMLDNDFTPNVVTFYILMDGYFKKGDIDNALGIFHMMMDANILPTDITLGIIIKGLCKAGRTSEGR
        M  KG+ P+++++  +I  +CK G +K A +V+  M+    +PNVVT+  L+DG  K+GD+D+A  + H M    + P   T   I+ GLCK+G   E  
Subjt:  MIVKGISPNAISYNNMILDHCKKGDIKAACKVYKEMLDNDFTPNVVTFYILMDGYFKKGDIDNALGIFHMMMDANILPTDITLGIIIKGLCKAGRTSEGR

Query:  DMFNKF
         +  +F
Subjt:  DMFNKF

AT1G09820.1 Pentatricopeptide repeat (PPR-like) superfamily protein2.9e-1840Show/hide
Query:  MIVKGISPNAISYNNMILDHCK---KGDIKAACKVYKEMLDNDFTPNVVTFYILMDGYFKKGDIDNALGIFHMMMDANILPTDITLGIIIKGLCKAGRTS
        M V G SPN +SYN +I  +CK    G +  A  V KEM++ND +PN+ TF IL+DG++K  ++  ++ +F  M+D ++ P  I+   +I GLC  G+ S
Subjt:  MIVKGISPNAISYNNMILDHCK---KGDIKAACKVYKEMLDNDFTPNVVTFYILMDGYFKKGDIDNALGIFHMMMDANILPTDITLGIIIKGLCKAGRTS

Query:  EGRDMFNKFV
        E   M +K V
Subjt:  EGRDMFNKFV

AT2G39230.1 LATERAL ORGAN JUNCTION3.4e-1938.46Show/hide
Query:  KGISPNAISYNNMILDHCKKGDIKAACKVYKEMLDNDFTPNVVTFYILMDGYFKKGDIDNALGIFHMMMDANILPTDITLGIIIKGLCKAGRTSEGRDMF
        KGI PN + YNNM+L HC+  ++  A  ++ EML+    PN  T+ IL+DG+FK  D  NA  + + M  +N    ++    II GLCK G+TS+ ++M 
Subjt:  KGISPNAISYNNMILDHCKKGDIKAACKVYKEMLDNDFTPNVVTFYILMDGYFKKGDIDNALGIFHMMMDANILPTDITLGIIIKGLCKAGRTSEGRDMF

Query:  NKFV
           +
Subjt:  NKFV

AT3G54980.1 Pentatricopeptide repeat (PPR) superfamily protein1.9e-1737.5Show/hide
Query:  KGISPNAISYNNMILDHCKKGDIKAACKVYKEMLDNDFTPNVVTFYILMDGYFKKGDIDNALGIFHMMMDANILPTDITLGIIIKGLCKAGRTSEGRDMF
        +GI PN +SYNN++L HC++ ++  A  V+  +L+    PN  T+ IL+DG F+  D  NAL + + M  +NI    +    II GLCK G+TS+ R++ 
Subjt:  KGISPNAISYNNMILDHCKKGDIKAACKVYKEMLDNDFTPNVVTFYILMDGYFKKGDIDNALGIFHMMMDANILPTDITLGIIIKGLCKAGRTSEGRDMF

Query:  NKFV
           +
Subjt:  NKFV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTGTCAAGGGTATTAGTCCTAATGCGATTTCTTACAACAACATGATACTCGATCATTGTAAAAAAGGAGATATTAAAGCAGCATGTAAGGTGTACAAGGAGATGCT
AGATAATGATTTTACACCGAATGTAGTTACATTTTATATTCTAATGGACGGCTATTTCAAGAAAGGTGATATTGACAATGCCTTGGGTATATTTCACATGATGATGGATG
CTAATATTCTCCCCACAGACATCACATTAGGCATTATTATCAAAGGCTTGTGCAAAGCTGGTCGTACTTCTGAGGGAAGGGATATGTTCAATAAGTTTGTTTTTCTCAAG
GTTTTGTTCCATCGTGTATGGCTTACAATATTATAA
mRNA sequenceShow/hide mRNA sequence
ATGATTGTCAAGGGTATTAGTCCTAATGCGATTTCTTACAACAACATGATACTCGATCATTGTAAAAAAGGAGATATTAAAGCAGCATGTAAGGTGTACAAGGAGATGCT
AGATAATGATTTTACACCGAATGTAGTTACATTTTATATTCTAATGGACGGCTATTTCAAGAAAGGTGATATTGACAATGCCTTGGGTATATTTCACATGATGATGGATG
CTAATATTCTCCCCACAGACATCACATTAGGCATTATTATCAAAGGCTTGTGCAAAGCTGGTCGTACTTCTGAGGGAAGGGATATGTTCAATAAGTTTGTTTTTCTCAAG
GTTTTGTTCCATCGTGTATGGCTTACAATATTATAA
Protein sequenceShow/hide protein sequence
MIVKGISPNAISYNNMILDHCKKGDIKAACKVYKEMLDNDFTPNVVTFYILMDGYFKKGDIDNALGIFHMMMDANILPTDITLGIIIKGLCKAGRTSEGRDMFNKFVFLK
VLFHRVWLTIL