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Moc02g14700 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc02g14700
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionU11/U12 small nuclear ribonucleoprotein 48 kDa protein
Genome locationchr2:10921533..10930620
RNA-Seq ExpressionMoc02g14700
SyntenyMoc02g14700
Gene Ontology termsGO:0016102 - diterpenoid biosynthetic process (biological process)
GO:0000287 - magnesium ion binding (molecular function)
GO:0010333 - terpene synthase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022144020.1 (-)-germacrene D synthase-like [Momordica charantia]1.2e-1195.12Show/hide
Query:  GVDHLPLKTLVILPSLELALYALVKYSSQLNDLQLLHGNHS
        GVDHLPLKTL I+PSLELALYALVKYSSQLNDLQLLHGNHS
Subjt:  GVDHLPLKTLVILPSLELALYALVKYSSQLNDLQLLHGNHS
XP_022151686.1 U11/U12 small nuclear ribonucleoprotein 48 kDa protein [Momordica charantia]7.8e-1681.03Show/hide
Query:  VDHLPLKTLVILPSLELALYALVKYSSQLNDLQLLHGNHSGLAGRTTLNKVAAMVLQV
        + HLPLKTL ILPSLELA+YALVKYSSQLNDLQLL GNHSGLAGRTT +KV A+ L+V
Subjt:  VDHLPLKTLVILPSLELALYALVKYSSQLNDLQLLHGNHSGLAGRTTLNKVAAMVLQV
TrEMBL top hitse value%identityAlignment
A0A6J1CQG9 (-)-germacrene D synthase-like5.6e-1295.12Show/hide
Query:  GVDHLPLKTLVILPSLELALYALVKYSSQLNDLQLLHGNHS
        GVDHLPLKTL I+PSLELALYALVKYSSQLNDLQLLHGNHS
Subjt:  GVDHLPLKTLVILPSLELALYALVKYSSQLNDLQLLHGNHS
A0A6J1DFF2 U11/U12 small nuclear ribonucleoprotein 48 kDa protein3.8e-1681.03Show/hide
Query:  VDHLPLKTLVILPSLELALYALVKYSSQLNDLQLLHGNHSGLAGRTTLNKVAAMVLQV
        + HLPLKTL ILPSLELA+YALVKYSSQLNDLQLL GNHSGLAGRTT +KV A+ L+V
Subjt:  VDHLPLKTLVILPSLELALYALVKYSSQLNDLQLLHGNHSGLAGRTTLNKVAAMVLQV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGGAGCAGCCGACGTCATCCCCTGAAGGGTCTCTTTCGAGATAAGGGTTTGGAGTCGCCACCAATCATCTACGAGATCGGGTTCGATTTAACCGAAAGAGAAAATGC
AAAGGACCTGGCTTTAACAACAGGCTTCGATCTCGACTTGGATCAGGTAAGCATGAATTACGGCGTGCTGTCGTCGAGTTTGTTGAAATATGTGGCTAAGCAAGACACAT
CTAGGTCGGTTCAAACAAAGAATGGGAACGAGACCAAAGGAGATCTTCGTTGGCTCGGCCATAACGGGCGTTGGCTCGGTAGACAGTGGAAGTACCGAGGTGGTGTTGAC
CATCTTCCTTTGAAAACTTTAGTCATCCTGCCTTCATTAGAACTTGCACTTTATGCTTTAGTGAAGTACAGTTCTCAGTTGAATGACCTACAGCTCCTGCATGGTAATCA
CAGTGGACTTGCGGGTCGTACCACTTTGAATAAGGTGGCTGCAATGGTTCTACAGGTAATGCTGACAATCTTAGATGTGGGTCATTCTGCAGAGCCGATGAGTTTATGGG
GAAGCGCTCTGTTGGTTGACAAAGAGGTGAGTTCACCTCAGGATAATGGCCCTCAAATCTTCCATATGCTTTGGCAATATGGTCGACTTGAGTGGAGAATTTCATGTGCC
TGCACGGGAATCGAAATTCCACGAAGGTCACACTACTCAGTCTCTGATCTAATCCTAAGGGTAAAGCCCGGGTCCCCAGCGGAGTCGCCAAGCTGTTGCAACGTCATCGC
GACGCGGAGCGGCCGACGTCATCCCCTGAAGGGTCTCTTTCGAGATAAGGGTTTGGAGTCGCCACCAATCATCTACGAGGTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCGGAGCAGCCGACGTCATCCCCTGAAGGGTCTCTTTCGAGATAAGGGTTTGGAGTCGCCACCAATCATCTACGAGATCGGGTTCGATTTAACCGAAAGAGAAAATGC
AAAGGACCTGGCTTTAACAACAGGCTTCGATCTCGACTTGGATCAGGTAAGCATGAATTACGGCGTGCTGTCGTCGAGTTTGTTGAAATATGTGGCTAAGCAAGACACAT
CTAGGTCGGTTCAAACAAAGAATGGGAACGAGACCAAAGGAGATCTTCGTTGGCTCGGCCATAACGGGCGTTGGCTCGGTAGACAGTGGAAGTACCGAGGTGGTGTTGAC
CATCTTCCTTTGAAAACTTTAGTCATCCTGCCTTCATTAGAACTTGCACTTTATGCTTTAGTGAAGTACAGTTCTCAGTTGAATGACCTACAGCTCCTGCATGGTAATCA
CAGTGGACTTGCGGGTCGTACCACTTTGAATAAGGTGGCTGCAATGGTTCTACAGGTAATGCTGACAATCTTAGATGTGGGTCATTCTGCAGAGCCGATGAGTTTATGGG
GAAGCGCTCTGTTGGTTGACAAAGAGGTGAGTTCACCTCAGGATAATGGCCCTCAAATCTTCCATATGCTTTGGCAATATGGTCGACTTGAGTGGAGAATTTCATGTGCC
TGCACGGGAATCGAAATTCCACGAAGGTCACACTACTCAGTCTCTGATCTAATCCTAAGGGTAAAGCCCGGGTCCCCAGCGGAGTCGCCAAGCTGTTGCAACGTCATCGC
GACGCGGAGCGGCCGACGTCATCCCCTGAAGGGTCTCTTTCGAGATAAGGGTTTGGAGTCGCCACCAATCATCTACGAGGTGTGA
Protein sequenceShow/hide protein sequence
MRSSRRHPLKGLFRDKGLESPPIIYEIGFDLTERENAKDLALTTGFDLDLDQVSMNYGVLSSSLLKYVAKQDTSRSVQTKNGNETKGDLRWLGHNGRWLGRQWKYRGGVD
HLPLKTLVILPSLELALYALVKYSSQLNDLQLLHGNHSGLAGRTTLNKVAAMVLQVMLTILDVGHSAEPMSLWGSALLVDKEVSSPQDNGPQIFHMLWQYGRLEWRISCA
CTGIEIPRRSHYSVSDLILRVKPGSPAESPSCCNVIATRSGRRHPLKGLFRDKGLESPPIIYEV