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Moc02g14910 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc02g14910
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionPMD domain-containing protein
Genome locationchr2:11052967..11054307
RNA-Seq ExpressionMoc02g14910
SyntenyMoc02g14910
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050516.1 hypothetical protein E6C27_scaffold175G001600 [Cucumis melo var. makuwa]2.5e-3340.31Show/hide
Query:  RVSVKLWISLWFKGDQKYAQPPSRRARKTARPRSTSNPDGTPTICRSWSMEEIGLFDQLGIGDEWRGKMHLAAFLSCWLCIFVFPSKNSLFRPEVFKTAS
        +V++  WIS W+ G + Y +P +R+ +  +R +ST NPDG+    R WS  E  LF +LGI D+ + + +LAAFLSCWLC+FVFP K S  RP VF+ AS
Subjt:  RVSVKLWISLWFKGDQKYAQPPSRRARKTARPRSTSNPDGTPTICRSWSMEEIGLFDQLGIGDEWRGKMHLAAFLSCWLCIFVFPSKNSLFRPEVFKTAS

Query:  YMAEGIVFSLVIPALVNIYHW------ARPDPRCVNF---------------------NSELRRPMMVDYFGEGGAKYFKEAAARDIIHRG
         MA G ++SL +P L NIYH       A    R ++F                     ++E+R P M ++ G GG+ YF E  AR++IH G
Subjt:  YMAEGIVFSLVIPALVNIYHW------ARPDPRCVNF---------------------NSELRRPMMVDYFGEGGAKYFKEAAARDIIHRG

KAA0053466.1 hypothetical protein E6C27_scaffold190G00140 [Cucumis melo var. makuwa]4.3e-3339.79Show/hide
Query:  RVSVKLWISLWFKGDQKYAQPPSRRARKTARPRSTSNPDGTPTICRSWSMEEIGLFDQLGIGDEWRGKMHLAAFLSCWLCIFVFPSKNSLFRPEVFKTAS
        +V++  WIS W+ G + Y +P +R+ +K +R +ST NPDG+    R WS  E  LF +LGI D+ + + +LAAFLSCWLC+FVFP K S  R  VF+ AS
Subjt:  RVSVKLWISLWFKGDQKYAQPPSRRARKTARPRSTSNPDGTPTICRSWSMEEIGLFDQLGIGDEWRGKMHLAAFLSCWLCIFVFPSKNSLFRPEVFKTAS

Query:  YMAEGIVFSLVIPALVNIYHWARPDPRCVN---------------------------FNSELRRPMMVDYFGEGGAKYFKEAAARDIIHRG
         MA G ++SL +P L NIYH      +  N                              E+R P M ++ GEGG+ YF E  AR++IH G
Subjt:  YMAEGIVFSLVIPALVNIYHWARPDPRCVN---------------------------FNSELRRPMMVDYFGEGGAKYFKEAAARDIIHRG

KAA0057575.1 hypothetical protein E6C27_scaffold497G00470 [Cucumis melo var. makuwa]1.5e-3339.27Show/hide
Query:  RVSVKLWISLWFKGDQKYAQPPSRRARKTARPRSTSNPDGTPTICRSWSMEEIGLFDQLGIGDEWRGKMHLAAFLSCWLCIFVFPSKNSLFRPEVFKTAS
        +V++  WIS W+ G + Y +P +R+ +K +R +ST NPDG+    R WS  E  LF +LGI D+ + + +LAAFLSCWLC+FVFP K S  RPEVF+ AS
Subjt:  RVSVKLWISLWFKGDQKYAQPPSRRARKTARPRSTSNPDGTPTICRSWSMEEIGLFDQLGIGDEWRGKMHLAAFLSCWLCIFVFPSKNSLFRPEVFKTAS

Query:  YMAEGIVFSLVIPALVNIYHWARPDPRCVN---------------------------FNSELRRPMMVDYFGEGGAKYFKEAAARDIIHRG
         M  G ++SL +P L NIYH      +  N                              E+R P M ++ GEGG+ YF +  A ++IH G
Subjt:  YMAEGIVFSLVIPALVNIYHWARPDPRCVN---------------------------FNSELRRPMMVDYFGEGGAKYFKEAAARDIIHRG

TYK20969.1 hypothetical protein E5676_scaffold18270G00010 [Cucumis melo var. makuwa]7.8e-3540.31Show/hide
Query:  RVSVKLWISLWFKGDQKYAQPPSRRARKTARPRSTSNPDGTPTICRSWSMEEIGLFDQLGIGDEWRGKMHLAAFLSCWLCIFVFPSKNSLFRPEVFKTAS
        +V++  WIS W+ G + Y +P +R+ +K +R +ST NPDG+    R WS  E  LF +LGI D+ + + +LAAFLSCWLC+FVFP K S  RP VF+ AS
Subjt:  RVSVKLWISLWFKGDQKYAQPPSRRARKTARPRSTSNPDGTPTICRSWSMEEIGLFDQLGIGDEWRGKMHLAAFLSCWLCIFVFPSKNSLFRPEVFKTAS

Query:  YMAEGIVFSLVIPALVNIYHWARPDPRCVN---------------------------FNSELRRPMMVDYFGEGGAKYFKEAAARDIIHRG
         MA G ++SL +P L NIYH      +  N                             +E+RRP M ++ GEGG+ YF +  AR++IH G
Subjt:  YMAEGIVFSLVIPALVNIYHWARPDPRCVN---------------------------FNSELRRPMMVDYFGEGGAKYFKEAAARDIIHRG

XP_031745312.1 uncharacterized protein LOC116405439 [Cucumis sativus]6.4e-3744.9Show/hide
Query:  RVSVKLWISLWF-KGDQKYAQPPSRRARKTARPRSTSNPDGTPTICRSWSMEEIGLFDQLGIGDEWRGKMHLAAFLSCWLCIFVFPSKNSLFRPEVFKTA
        +++V  WIS W  + + KY++PP R+ +KT+RPRST NPDG P     WS  E+ +F  L + D+ R K +LAAFLSCWLC+FVFP K    RPEVFK A
Subjt:  RVSVKLWISLWF-KGDQKYAQPPSRRARKTARPRSTSNPDGTPTICRSWSMEEIGLFDQLGIGDEWRGKMHLAAFLSCWLCIFVFPSKNSLFRPEVFKTA

Query:  SYMAEGIVFSLVIPALVNIYHWARP----------DPRC-----------VNFNS------ELRRPMMVDYFGEGGAKYFKEAAARDIIHRGKCIS
        S MAEG  FSL +P L NIY   R              C           + FN+       LR P MV++ GEGGAKY+    AR  IH+GK +S
Subjt:  SYMAEGIVFSLVIPALVNIYHWARP----------DPRC-----------VNFNS------ELRRPMMVDYFGEGGAKYFKEAAARDIIHRGKCIS

TrEMBL top hitse value%identityAlignment
A0A5A7U8L3 PMD domain-containing protein1.2e-3340.31Show/hide
Query:  RVSVKLWISLWFKGDQKYAQPPSRRARKTARPRSTSNPDGTPTICRSWSMEEIGLFDQLGIGDEWRGKMHLAAFLSCWLCIFVFPSKNSLFRPEVFKTAS
        +V++  WIS W+ G + Y +P +R+ +  +R +ST NPDG+    R WS  E  LF +LGI D+ + + +LAAFLSCWLC+FVFP K S  RP VF+ AS
Subjt:  RVSVKLWISLWFKGDQKYAQPPSRRARKTARPRSTSNPDGTPTICRSWSMEEIGLFDQLGIGDEWRGKMHLAAFLSCWLCIFVFPSKNSLFRPEVFKTAS

Query:  YMAEGIVFSLVIPALVNIYHW------ARPDPRCVNF---------------------NSELRRPMMVDYFGEGGAKYFKEAAARDIIHRG
         MA G ++SL +P L NIYH       A    R ++F                     ++E+R P M ++ G GG+ YF E  AR++IH G
Subjt:  YMAEGIVFSLVIPALVNIYHW------ARPDPRCVNF---------------------NSELRRPMMVDYFGEGGAKYFKEAAARDIIHRG

A0A5A7UGW6 PMD domain-containing protein2.1e-3339.79Show/hide
Query:  RVSVKLWISLWFKGDQKYAQPPSRRARKTARPRSTSNPDGTPTICRSWSMEEIGLFDQLGIGDEWRGKMHLAAFLSCWLCIFVFPSKNSLFRPEVFKTAS
        +V++  WIS W+ G + Y +P +R+ +K +R +ST NPDG+    R WS  E  LF +LGI D+ + + +LAAFLSCWLC+FVFP K S  R  VF+ AS
Subjt:  RVSVKLWISLWFKGDQKYAQPPSRRARKTARPRSTSNPDGTPTICRSWSMEEIGLFDQLGIGDEWRGKMHLAAFLSCWLCIFVFPSKNSLFRPEVFKTAS

Query:  YMAEGIVFSLVIPALVNIYHWARPDPRCVN---------------------------FNSELRRPMMVDYFGEGGAKYFKEAAARDIIHRG
         MA G ++SL +P L NIYH      +  N                              E+R P M ++ GEGG+ YF E  AR++IH G
Subjt:  YMAEGIVFSLVIPALVNIYHWARPDPRCVN---------------------------FNSELRRPMMVDYFGEGGAKYFKEAAARDIIHRG

A0A5A7UVI5 PMD domain-containing protein7.1e-3439.27Show/hide
Query:  RVSVKLWISLWFKGDQKYAQPPSRRARKTARPRSTSNPDGTPTICRSWSMEEIGLFDQLGIGDEWRGKMHLAAFLSCWLCIFVFPSKNSLFRPEVFKTAS
        +V++  WIS W+ G + Y +P +R+ +K +R +ST NPDG+    R WS  E  LF +LGI D+ + + +LAAFLSCWLC+FVFP K S  RPEVF+ AS
Subjt:  RVSVKLWISLWFKGDQKYAQPPSRRARKTARPRSTSNPDGTPTICRSWSMEEIGLFDQLGIGDEWRGKMHLAAFLSCWLCIFVFPSKNSLFRPEVFKTAS

Query:  YMAEGIVFSLVIPALVNIYHWARPDPRCVN---------------------------FNSELRRPMMVDYFGEGGAKYFKEAAARDIIHRG
         M  G ++SL +P L NIYH      +  N                              E+R P M ++ GEGG+ YF +  A ++IH G
Subjt:  YMAEGIVFSLVIPALVNIYHWARPDPRCVN---------------------------FNSELRRPMMVDYFGEGGAKYFKEAAARDIIHRG

A0A5A7VHW8 PMD domain-containing protein2.1e-3340.1Show/hide
Query:  RVSVKLWISLWFKGDQKYAQPPSRRARKTARPRSTSNPDGTPTICRSWSMEEIGLFDQLGIGDEWRGKMHLAAFLSCWLCIFVFPSKNSLFRPEVFKTAS
        +V++  WIS W+ G + Y +P +R+ +  +R +ST NPDG+    R WS  E  LF +LGI D+ + + +LAAFLSCWLC+FVFP K S  RP VF+ AS
Subjt:  RVSVKLWISLWFKGDQKYAQPPSRRARKTARPRSTSNPDGTPTICRSWSMEEIGLFDQLGIGDEWRGKMHLAAFLSCWLCIFVFPSKNSLFRPEVFKTAS

Query:  YMAEGIVFSLVIPALVNIYHW-------ARPDPRCVNFN---------------------SELRRPMMVDYFGEGGAKYFKEAAARDIIHRG
         M  G ++SL +P L NIYH        + P  R ++F+                     +E+R P M ++ GEGG+ YF E  AR +IH G
Subjt:  YMAEGIVFSLVIPALVNIYHW-------ARPDPRCVNFN---------------------SELRRPMMVDYFGEGGAKYFKEAAARDIIHRG

A0A5D3DCE5 PMD domain-containing protein3.8e-3540.31Show/hide
Query:  RVSVKLWISLWFKGDQKYAQPPSRRARKTARPRSTSNPDGTPTICRSWSMEEIGLFDQLGIGDEWRGKMHLAAFLSCWLCIFVFPSKNSLFRPEVFKTAS
        +V++  WIS W+ G + Y +P +R+ +K +R +ST NPDG+    R WS  E  LF +LGI D+ + + +LAAFLSCWLC+FVFP K S  RP VF+ AS
Subjt:  RVSVKLWISLWFKGDQKYAQPPSRRARKTARPRSTSNPDGTPTICRSWSMEEIGLFDQLGIGDEWRGKMHLAAFLSCWLCIFVFPSKNSLFRPEVFKTAS

Query:  YMAEGIVFSLVIPALVNIYHWARPDPRCVN---------------------------FNSELRRPMMVDYFGEGGAKYFKEAAARDIIHRG
         MA G ++SL +P L NIYH      +  N                             +E+RRP M ++ GEGG+ YF +  AR++IH G
Subjt:  YMAEGIVFSLVIPALVNIYHWARPDPRCVN---------------------------FNSELRRPMMVDYFGEGGAKYFKEAAARDIIHRG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATATATTTTGCGGAACACCCTGATCCCAAGAAGAGTTATTTGGTTATTTTAAAGGACAAGGACCAATCGCTGAACAACGTACTTATCCTCCCAGTAGAGGAGCTAAT
ACAAAATCCTAAAGATGATGTTGGTTTACGAGTCTCTGTCAAGTTGTGGATCTCTTTATGGTTTAAAGGAGATCAGAAATATGCACAACCGCCTTCTCGAAGGGCACGAA
AAACTGCTCGACCTCGCTCAACCAGTAACCCGGATGGGACTCCTACAATATGTCGCAGTTGGTCAATGGAAGAAATCGGGTTATTTGACCAGCTGGGCATAGGAGATGAA
TGGAGGGGAAAAATGCATTTAGCCGCTTTCCTATCTTGTTGGTTATGCATATTCGTCTTTCCCAGCAAGAATTCTCTTTTTCGTCCAGAAGTTTTTAAAACTGCTAGTTA
CATGGCTGAAGGTATTGTATTTAGCCTTGTCATTCCTGCTTTGGTCAACATTTATCATTGGGCTCGGCCAGATCCACGATGCGTTAACTTCAACTCGGAACTCAGACGTC
CGATGATGGTTGATTATTTTGGAGAAGGTGGAGCTAAATACTTCAAGGAGGCTGCTGCTCGTGACATAATTCACAGGGGTAAATGTATATCAGGCATTCAACTTTACAGT
CCAGAAATAGAGATGAATATCTGA
mRNA sequenceShow/hide mRNA sequence
ATGATATATTTTGCGGAACACCCTGATCCCAAGAAGAGTTATTTGGTTATTTTAAAGGACAAGGACCAATCGCTGAACAACGTACTTATCCTCCCAGTAGAGGAGCTAAT
ACAAAATCCTAAAGATGATGTTGGTTTACGAGTCTCTGTCAAGTTGTGGATCTCTTTATGGTTTAAAGGAGATCAGAAATATGCACAACCGCCTTCTCGAAGGGCACGAA
AAACTGCTCGACCTCGCTCAACCAGTAACCCGGATGGGACTCCTACAATATGTCGCAGTTGGTCAATGGAAGAAATCGGGTTATTTGACCAGCTGGGCATAGGAGATGAA
TGGAGGGGAAAAATGCATTTAGCCGCTTTCCTATCTTGTTGGTTATGCATATTCGTCTTTCCCAGCAAGAATTCTCTTTTTCGTCCAGAAGTTTTTAAAACTGCTAGTTA
CATGGCTGAAGGTATTGTATTTAGCCTTGTCATTCCTGCTTTGGTCAACATTTATCATTGGGCTCGGCCAGATCCACGATGCGTTAACTTCAACTCGGAACTCAGACGTC
CGATGATGGTTGATTATTTTGGAGAAGGTGGAGCTAAATACTTCAAGGAGGCTGCTGCTCGTGACATAATTCACAGGGGTAAATGTATATCAGGCATTCAACTTTACAGT
CCAGAAATAGAGATGAATATCTGA
Protein sequenceShow/hide protein sequence
MIYFAEHPDPKKSYLVILKDKDQSLNNVLILPVEELIQNPKDDVGLRVSVKLWISLWFKGDQKYAQPPSRRARKTARPRSTSNPDGTPTICRSWSMEEIGLFDQLGIGDE
WRGKMHLAAFLSCWLCIFVFPSKNSLFRPEVFKTASYMAEGIVFSLVIPALVNIYHWARPDPRCVNFNSELRRPMMVDYFGEGGAKYFKEAAARDIIHRGKCISGIQLYS
PEIEMNI