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Moc02g15040 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc02g15040
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionReverse transcriptase
Genome locationchr2:11160211..11160501
RNA-Seq ExpressionMoc02g15040
SyntenyMoc02g15040
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domainsIPR041588 - Integrase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060055.1 reverse transcriptase [Cucumis melo var. makuwa]2.5e-3067.71Show/hide
Query:  MLAHLKASKLTGSIREAIRENLQNDPATQAIIQLANERKTRQFWVENDLLFTKGNRLYVPCSGNLRKLLLGKCHDTMWAGHAGWQRTYALLKKGYY
        +LAHL+ S++ GS+R+ +RE LQ D A Q ++ LA   KTRQFWVE DLL TKGNRLYVP +GNLRK LL +CHDT+WAGH GWQRTYALLKKGY+
Subjt:  MLAHLKASKLTGSIREAIRENLQNDPATQAIIQLANERKTRQFWVENDLLFTKGNRLYVPCSGNLRKLLLGKCHDTMWAGHAGWQRTYALLKKGYY

KAA0060776.1 reverse transcriptase [Cucumis melo var. makuwa]4.9e-3166.67Show/hide
Query:  MLAHLKASKLTGSIREAIRENLQNDPATQAIIQLANERKTRQFWVENDLLFTKGNRLYVPCSGNLRKLLLGKCHDTMWAGHAGWQRTYALLKKGYY
        +LAHL+ SK+ GS+R+ +RE LQ DPA Q ++ LA   KTRQFWVE+DLL T+GNRLYVP +G++RK LL +CHDT+WAGH GWQRTYALLKKGY+
Subjt:  MLAHLKASKLTGSIREAIRENLQNDPATQAIIQLANERKTRQFWVENDLLFTKGNRLYVPCSGNLRKLLLGKCHDTMWAGHAGWQRTYALLKKGYY

TYK01224.1 reverse transcriptase [Cucumis melo var. makuwa]4.9e-3166.67Show/hide
Query:  MLAHLKASKLTGSIREAIRENLQNDPATQAIIQLANERKTRQFWVENDLLFTKGNRLYVPCSGNLRKLLLGKCHDTMWAGHAGWQRTYALLKKGYY
        +LAHL+ SK+ GS+R+ +RE LQ DPA Q ++ LA   KTRQFWVE+DLL T+GNRLYVP +G++RK LL +CHDT+WAGH GWQRTYALLKKGY+
Subjt:  MLAHLKASKLTGSIREAIRENLQNDPATQAIIQLANERKTRQFWVENDLLFTKGNRLYVPCSGNLRKLLLGKCHDTMWAGHAGWQRTYALLKKGYY

XP_022155185.1 uncharacterized protein LOC111022320 [Momordica charantia]6.2e-4291.67Show/hide
Query:  MLAHLKASKLTGSIREAIRENLQNDPATQAIIQLANERKTRQFWVENDLLFTKGNRLYVPCSGNLRKLLLGKCHDTMWAGHAGWQRTYALLKKGYY
        MLAHLKASKLTGSIREAIRENLQNDPA QAIIQLANE  TRQF VENDL FTKGN LYVP SGNLRKLLLG+CHDTMWAGHAGWQRTYALLKKGYY
Subjt:  MLAHLKASKLTGSIREAIRENLQNDPATQAIIQLANERKTRQFWVENDLLFTKGNRLYVPCSGNLRKLLLGKCHDTMWAGHAGWQRTYALLKKGYY

XP_023537907.1 uncharacterized protein LOC111798805 [Cucurbita pepo subsp. pepo]6.5e-3164.58Show/hide
Query:  MLAHLKASKLTGSIREAIRENLQNDPATQAIIQLANERKTRQFWVENDLLFTKGNRLYVPCSGNLRKLLLGKCHDTMWAGHAGWQRTYALLKKGYY
        MLAH+ +SK+ GS+R+ I+E+L  DP+ +A+++LA   KTRQFWVE DLL TKGNRLYVP +G LRK L+ +CHDT+WAGH GWQRTYAL+KKGY+
Subjt:  MLAHLKASKLTGSIREAIRENLQNDPATQAIIQLANERKTRQFWVENDLLFTKGNRLYVPCSGNLRKLLLGKCHDTMWAGHAGWQRTYALLKKGYY

TrEMBL top hitse value%identityAlignment
A0A5A7UY33 Reverse transcriptase2.6e-3066.67Show/hide
Query:  MLAHLKASKLTGSIREAIRENLQNDPATQAIIQLANERKTRQFWVENDLLFTKGNRLYVPCSGNLRKLLLGKCHDTMWAGHAGWQRTYALLKKGYY
        +LAHL+ S++ GS+R+ +RE LQ D A Q ++ LA   KTRQFWVE+DL  TKGNRLYVP +GNLRK LL +CHDT+WAGH GWQRTYALLKKGY+
Subjt:  MLAHLKASKLTGSIREAIRENLQNDPATQAIIQLANERKTRQFWVENDLLFTKGNRLYVPCSGNLRKLLLGKCHDTMWAGHAGWQRTYALLKKGYY

A0A5A7V2E6 Reverse transcriptase1.2e-3067.71Show/hide
Query:  MLAHLKASKLTGSIREAIRENLQNDPATQAIIQLANERKTRQFWVENDLLFTKGNRLYVPCSGNLRKLLLGKCHDTMWAGHAGWQRTYALLKKGYY
        +LAHL+ S++ GS+R+ +RE LQ D A Q ++ LA   KTRQFWVE DLL TKGNRLYVP +GNLRK LL +CHDT+WAGH GWQRTYALLKKGY+
Subjt:  MLAHLKASKLTGSIREAIRENLQNDPATQAIIQLANERKTRQFWVENDLLFTKGNRLYVPCSGNLRKLLLGKCHDTMWAGHAGWQRTYALLKKGYY

A0A5A7V2P1 Reverse transcriptase2.4e-3166.67Show/hide
Query:  MLAHLKASKLTGSIREAIRENLQNDPATQAIIQLANERKTRQFWVENDLLFTKGNRLYVPCSGNLRKLLLGKCHDTMWAGHAGWQRTYALLKKGYY
        +LAHL+ SK+ GS+R+ +RE LQ DPA Q ++ LA   KTRQFWVE+DLL T+GNRLYVP +G++RK LL +CHDT+WAGH GWQRTYALLKKGY+
Subjt:  MLAHLKASKLTGSIREAIRENLQNDPATQAIIQLANERKTRQFWVENDLLFTKGNRLYVPCSGNLRKLLLGKCHDTMWAGHAGWQRTYALLKKGYY

A0A5D3BPV8 Reverse transcriptase2.4e-3166.67Show/hide
Query:  MLAHLKASKLTGSIREAIRENLQNDPATQAIIQLANERKTRQFWVENDLLFTKGNRLYVPCSGNLRKLLLGKCHDTMWAGHAGWQRTYALLKKGYY
        +LAHL+ SK+ GS+R+ +RE LQ DPA Q ++ LA   KTRQFWVE+DLL T+GNRLYVP +G++RK LL +CHDT+WAGH GWQRTYALLKKGY+
Subjt:  MLAHLKASKLTGSIREAIRENLQNDPATQAIIQLANERKTRQFWVENDLLFTKGNRLYVPCSGNLRKLLLGKCHDTMWAGHAGWQRTYALLKKGYY

A0A6J1DLQ6 uncharacterized protein LOC1110223203.0e-4291.67Show/hide
Query:  MLAHLKASKLTGSIREAIRENLQNDPATQAIIQLANERKTRQFWVENDLLFTKGNRLYVPCSGNLRKLLLGKCHDTMWAGHAGWQRTYALLKKGYY
        MLAHLKASKLTGSIREAIRENLQNDPA QAIIQLANE  TRQF VENDL FTKGN LYVP SGNLRKLLLG+CHDTMWAGHAGWQRTYALLKKGYY
Subjt:  MLAHLKASKLTGSIREAIRENLQNDPATQAIIQLANERKTRQFWVENDLLFTKGNRLYVPCSGNLRKLLLGKCHDTMWAGHAGWQRTYALLKKGYY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAGCTCACCTAAAAGCGAGCAAGCTTACTGGATCCATTCGTGAAGCCATCAGAGAAAACTTACAGAATGACCCAGCTACCCAAGCGATAATTCAGTTGGCCAACGA
AAGGAAGACTAGACAGTTTTGGGTGGAGAATGACCTCCTCTTCACCAAAGGTAACCGTTTGTATGTTCCCTGTTCTGGGAACCTAAGAAAGCTCCTACTTGGAAAATGTC
ACGACACGATGTGGGCAGGCCATGCTGGATGGCAGAGAACTTACGCCCTGTTAAAGAAAGGCTACTACTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTAGCTCACCTAAAAGCGAGCAAGCTTACTGGATCCATTCGTGAAGCCATCAGAGAAAACTTACAGAATGACCCAGCTACCCAAGCGATAATTCAGTTGGCCAACGA
AAGGAAGACTAGACAGTTTTGGGTGGAGAATGACCTCCTCTTCACCAAAGGTAACCGTTTGTATGTTCCCTGTTCTGGGAACCTAAGAAAGCTCCTACTTGGAAAATGTC
ACGACACGATGTGGGCAGGCCATGCTGGATGGCAGAGAACTTACGCCCTGTTAAAGAAAGGCTACTACTAG
Protein sequenceShow/hide protein sequence
MLAHLKASKLTGSIREAIRENLQNDPATQAIIQLANERKTRQFWVENDLLFTKGNRLYVPCSGNLRKLLLGKCHDTMWAGHAGWQRTYALLKKGYY