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Moc02g15760 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc02g15760
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionU11/U12 small nuclear ribonucleoprotein 48 kDa protein
Genome locationchr2:11879716..11883526
RNA-Seq ExpressionMoc02g15760
SyntenyMoc02g15760
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022151686.1 U11/U12 small nuclear ribonucleoprotein 48 kDa protein [Momordica charantia]1.5e-2076.71Show/hide
Query:  NEDRLIHGNHSGLAGRTTLDKVVAMTLRIRELIDYLEIIGITTQCRILGSDESSLALVTSSYYDYLVLAGAST
        N+ +L+ GNHSGLAGRTT DKVVA+ LR+RELIDYLEIIGITTQCRILGSD SSLALV S YYDY V A   T
Subjt:  NEDRLIHGNHSGLAGRTTLDKVVAMTLRIRELIDYLEIIGITTQCRILGSDESSLALVTSSYYDYLVLAGAST
TrEMBL top hitse value%identityAlignment
A0A6J1DFF2 U11/U12 small nuclear ribonucleoprotein 48 kDa protein7.5e-2176.71Show/hide
Query:  NEDRLIHGNHSGLAGRTTLDKVVAMTLRIRELIDYLEIIGITTQCRILGSDESSLALVTSSYYDYLVLAGAST
        N+ +L+ GNHSGLAGRTT DKVVA+ LR+RELIDYLEIIGITTQCRILGSD SSLALV S YYDY V A   T
Subjt:  NEDRLIHGNHSGLAGRTTLDKVVAMTLRIRELIDYLEIIGITTQCRILGSDESSLALVTSSYYDYLVLAGAST
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACCTGGCTTTAACAACAGGCTTCGACCTCGAGTTGGATCGGGTTCGATTTAACCGAATGATAAAATGCAACGGACTTGGCTTTAACAACAGGCTTCGACCTCGAGT
TGGATCAGAGATCATAAAGAATGTGATAGGAATGGAGGCTGTGGAAAGCTGTTCTCATATTAAATTGCATCCCTTTGTAGAGCTCTTGCTAGAAATAGCTAATGAAGATC
GGCTCATTCATGGTAATCACAGTGGACTTGCGGGTCGTACCACTTTGGATAAGGTGGTTGCAATGACTCTACGGATACGGGAGCTAATAGATTACCTTGAAATAATTGGG
ATAACAACTCAGTGTAGGATATTGGGATCAGATGAAAGCTCTCTCGCTTTAGTTACCTCCTCCTACTATGATTATCTGGTCCTTGCTGGTGCATCCACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACCTGGCTTTAACAACAGGCTTCGACCTCGAGTTGGATCGGGTTCGATTTAACCGAATGATAAAATGCAACGGACTTGGCTTTAACAACAGGCTTCGACCTCGAGT
TGGATCAGAGATCATAAAGAATGTGATAGGAATGGAGGCTGTGGAAAGCTGTTCTCATATTAAATTGCATCCCTTTGTAGAGCTCTTGCTAGAAATAGCTAATGAAGATC
GGCTCATTCATGGTAATCACAGTGGACTTGCGGGTCGTACCACTTTGGATAAGGTGGTTGCAATGACTCTACGGATACGGGAGCTAATAGATTACCTTGAAATAATTGGG
ATAACAACTCAGTGTAGGATATTGGGATCAGATGAAAGCTCTCTCGCTTTAGTTACCTCCTCCTACTATGATTATCTGGTCCTTGCTGGTGCATCCACTTGA
Protein sequenceShow/hide protein sequence
MDLALTTGFDLELDRVRFNRMIKCNGLGFNNRLRPRVGSEIIKNVIGMEAVESCSHIKLHPFVELLLEIANEDRLIHGNHSGLAGRTTLDKVVAMTLRIRELIDYLEIIG
ITTQCRILGSDESSLALVTSSYYDYLVLAGAST