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Moc02g16010 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc02g16010
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionReverse transcriptase
Genome locationchr2:12044590..12048631
RNA-Seq ExpressionMoc02g16010
SyntenyMoc02g16010
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EPS60668.1 hypothetical protein M569_14134, partial [Genlisea aurea]2.7e-1334.11Show/hide
Query:  QMEMKFEGDQFTWNSRRQREAQPSENDIDVVLGSISLKVTPDMNCLLLAPYNAQEVERTIKEMFPTKVLGRDDFLAMFYQKFWHTVGPKTIASCLEILNE
        + E +   +   +  R    ++P E     VL SI  +++P M   LL P+   E+ER +K+M P    G DDF ++F+Q++WH V  + +++ L +LNE
Subjt:  QMEMKFEGDQFTWNSRRQREAQPSENDIDVVLGSISLKVTPDMNCLLLAPYNAQEVERTIKEMFPTKVLGRDDFLAMFYQKFWHTVGPKTIASCLEILNE

Query:  GKSLKGCNETNIVLILKSAFIPEASTNHK
        G+  +G N T+IVLI K A  PE  + ++
Subjt:  GKSLKGCNETNIVLILKSAFIPEASTNHK

KAA3479552.1 reverse transcriptase [Gossypium australe]2.7e-1341.94Show/hide
Query:  DIDVVLGSISLKVTPDMNCLLLAPYNAQEVERTIKEMFPTKVLGRDDFLAMFYQKFWHTVGPKTIASCLEILNEGKSLKGCNETNIVLILKSA
        D+  +L  I   ++ ++N  LL+ Y+ +E+++ +K M PTK  G D F A+F+QK+WH  G    A CL +LNEGK  +  N T+IVLI KS+
Subjt:  DIDVVLGSISLKVTPDMNCLLLAPYNAQEVERTIKEMFPTKVLGRDDFLAMFYQKFWHTVGPKTIASCLEILNEGKSLKGCNETNIVLILKSA

KAA3485169.1 reverse transcriptase [Gossypium australe]1.6e-1345.98Show/hide
Query:  VLGSISLKVTPDMNCLLLAPYNAQEVERTIKEMFPTKVLGRDDFLAMFYQKFWHTVGPKTIASCLEILNEGKSLKGCNETNIVLILK
        +L  I   ++ +MN  LL P++  EV + +KEM PTK  G D FL +F+QK+W+ VG + +  CL +LNEGK++   N TNIVLI K
Subjt:  VLGSISLKVTPDMNCLLLAPYNAQEVERTIKEMFPTKVLGRDDFLAMFYQKFWHTVGPKTIASCLEILNEGKSLKGCNETNIVLILK

XP_017624602.1 PREDICTED: uncharacterized protein LOC108468221 [Gossypium arboreum]2.1e-1346.74Show/hide
Query:  IDVVLGSISLKVTPDMNCLLLAPYNAQEVERTIKEMFPTKVLGRDDFLAMFYQKFWHTVGPKTIASCLEILNEGKSLKGCNETNIVLILKSA
        +D +L  + L ++  MN LLLA Y   E+   +K M  TK  G D F A+FYQK+WH VG +T   CL+ILN G SL+  N T +VLI K+A
Subjt:  IDVVLGSISLKVTPDMNCLLLAPYNAQEVERTIKEMFPTKVLGRDDFLAMFYQKFWHTVGPKTIASCLEILNEGKSLKGCNETNIVLILKSA

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]2.3e-1740.32Show/hide
Query:  NQMEMKFEGDQFTWNSRRQRE------AQPSENDIDVVLGSISLKVTPDMNCLLLAPYNAQEVERTIKEMFPTKVLGRDDFLAMFYQKFWHTVGPKTIAS
        N +    E ++  W  R + +      A  +  DI+ ++  I  ++T ++N  LLAPY  +E+E  I++MFPTK LG D F A+FYQ +WH VGPKT+ +
Subjt:  NQMEMKFEGDQFTWNSRRQRE------AQPSENDIDVVLGSISLKVTPDMNCLLLAPYNAQEVERTIKEMFPTKVLGRDDFLAMFYQKFWHTVGPKTIAS

Query:  CLEILNEGKSLKGCNETNIVLILK
        CL  LN G  +K  N T I LI K
Subjt:  CLEILNEGKSLKGCNETNIVLILK

TrEMBL top hitse value%identityAlignment
A0A5B6WFI0 Reverse transcriptase1.3e-1341.94Show/hide
Query:  DIDVVLGSISLKVTPDMNCLLLAPYNAQEVERTIKEMFPTKVLGRDDFLAMFYQKFWHTVGPKTIASCLEILNEGKSLKGCNETNIVLILKSA
        D+  +L  I   ++ ++N  LL+ Y+ +E+++ +K M PTK  G D F A+F+QK+WH  G    A CL +LNEGK  +  N T+IVLI KS+
Subjt:  DIDVVLGSISLKVTPDMNCLLLAPYNAQEVERTIKEMFPTKVLGRDDFLAMFYQKFWHTVGPKTIASCLEILNEGKSLKGCNETNIVLILKSA

A0A5B6WTD6 Reverse transcriptase7.6e-1445.98Show/hide
Query:  VLGSISLKVTPDMNCLLLAPYNAQEVERTIKEMFPTKVLGRDDFLAMFYQKFWHTVGPKTIASCLEILNEGKSLKGCNETNIVLILK
        +L  I   ++ +MN  LL P++  EV + +KEM PTK  G D FL +F+QK+W+ VG + +  CL +LNEGK++   N TNIVLI K
Subjt:  VLGSISLKVTPDMNCLLLAPYNAQEVERTIKEMFPTKVLGRDDFLAMFYQKFWHTVGPKTIASCLEILNEGKSLKGCNETNIVLILK

A0A6J1DX30 uncharacterized protein LOC1110248741.1e-1740.32Show/hide
Query:  NQMEMKFEGDQFTWNSRRQRE------AQPSENDIDVVLGSISLKVTPDMNCLLLAPYNAQEVERTIKEMFPTKVLGRDDFLAMFYQKFWHTVGPKTIAS
        N +    E ++  W  R + +      A  +  DI+ ++  I  ++T ++N  LLAPY  +E+E  I++MFPTK LG D F A+FYQ +WH VGPKT+ +
Subjt:  NQMEMKFEGDQFTWNSRRQRE------AQPSENDIDVVLGSISLKVTPDMNCLLLAPYNAQEVERTIKEMFPTKVLGRDDFLAMFYQKFWHTVGPKTIAS

Query:  CLEILNEGKSLKGCNETNIVLILK
        CL  LN G  +K  N T I LI K
Subjt:  CLEILNEGKSLKGCNETNIVLILK

A0A6P4NNC4 uncharacterized protein LOC1084682211.0e-1346.74Show/hide
Query:  IDVVLGSISLKVTPDMNCLLLAPYNAQEVERTIKEMFPTKVLGRDDFLAMFYQKFWHTVGPKTIASCLEILNEGKSLKGCNETNIVLILKSA
        +D +L  + L ++  MN LLLA Y   E+   +K M  TK  G D F A+FYQK+WH VG +T   CL+ILN G SL+  N T +VLI K+A
Subjt:  IDVVLGSISLKVTPDMNCLLLAPYNAQEVERTIKEMFPTKVLGRDDFLAMFYQKFWHTVGPKTIASCLEILNEGKSLKGCNETNIVLILKSA

S8DCX9 Uncharacterized protein (Fragment)1.3e-1334.11Show/hide
Query:  QMEMKFEGDQFTWNSRRQREAQPSENDIDVVLGSISLKVTPDMNCLLLAPYNAQEVERTIKEMFPTKVLGRDDFLAMFYQKFWHTVGPKTIASCLEILNE
        + E +   +   +  R    ++P E     VL SI  +++P M   LL P+   E+ER +K+M P    G DDF ++F+Q++WH V  + +++ L +LNE
Subjt:  QMEMKFEGDQFTWNSRRQREAQPSENDIDVVLGSISLKVTPDMNCLLLAPYNAQEVERTIKEMFPTKVLGRDDFLAMFYQKFWHTVGPKTIASCLEILNE

Query:  GKSLKGCNETNIVLILKSAFIPEASTNHK
        G+  +G N T+IVLI K A  PE  + ++
Subjt:  GKSLKGCNETNIVLILKSAFIPEASTNHK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGGGTTATCTGTAGATTCTCCAGCAGCAAAGAAACATCGTGAACTGGAGTGTGAAGAGGAGGCAATGGTTAATAATGAATTTCTGATATCAGCAGAGGCTAATGA
AGAGGTGGATGTTACAATTCGGTCTTATTCTATTAATCATATTGATTCTGGGATAAACTTTCAGGGAGACTATGACGCCTGCAATCAAATGGAGATGAAGTTTGAAGGAG
ACCAGTTTACATGGAATAGTAGGAGGCAGAGAGAAGCCCAGCCTAGTGAGAATGATATAGATGTGGTTCTGGGTTCTATCTCACTAAAGGTTACTCCAGATATGAATTGT
CTTCTGCTTGCACCCTATAATGCCCAGGAGGTAGAAAGGACAATTAAAGAGATGTTTCCTACAAAAGTTCTTGGACGGGACGATTTTCTAGCTATGTTCTATCAGAAATT
CTGGCATACGGTGGGTCCAAAGACTATAGCTAGCTGTTTGGAGATTCTTAACGAGGGAAAGAGTTTGAAGGGATGCAATGAAACCAATATTGTGCTTATCCTTAAGTCAG
CTTTCATTCCTGAAGCGTCCACAAATCATAAAATATCGGGAATTGTTCTAGGGGAAGAGTGTCCAGGTATTTCTCATCTTTTCTTTGCTGATGCAGTGGAGTGTTGTGAG
CTTAAACGATTCTATTACGCAATGAGATGGCTTCAGGCGGGTCACCGCACCGACGCTGAGTATTTTGGTTTCAGGTCCGCTGGGTTTCAAGCCGGACTGCTCGTCCATGT
ACCCCGTGGCCCTCTACTAATTTTTCCGTCAACAATTGGTGCCGTCTGTGGGAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTGGGTTATCTGTAGATTCTCCAGCAGCAAAGAAACATCGTGAACTGGAGTGTGAAGAGGAGGCAATGGTTAATAATGAATTTCTGATATCAGCAGAGGCTAATGA
AGAGGTGGATGTTACAATTCGGTCTTATTCTATTAATCATATTGATTCTGGGATAAACTTTCAGGGAGACTATGACGCCTGCAATCAAATGGAGATGAAGTTTGAAGGAG
ACCAGTTTACATGGAATAGTAGGAGGCAGAGAGAAGCCCAGCCTAGTGAGAATGATATAGATGTGGTTCTGGGTTCTATCTCACTAAAGGTTACTCCAGATATGAATTGT
CTTCTGCTTGCACCCTATAATGCCCAGGAGGTAGAAAGGACAATTAAAGAGATGTTTCCTACAAAAGTTCTTGGACGGGACGATTTTCTAGCTATGTTCTATCAGAAATT
CTGGCATACGGTGGGTCCAAAGACTATAGCTAGCTGTTTGGAGATTCTTAACGAGGGAAAGAGTTTGAAGGGATGCAATGAAACCAATATTGTGCTTATCCTTAAGTCAG
CTTTCATTCCTGAAGCGTCCACAAATCATAAAATATCGGGAATTGTTCTAGGGGAAGAGTGTCCAGGTATTTCTCATCTTTTCTTTGCTGATGCAGTGGAGTGTTGTGAG
CTTAAACGATTCTATTACGCAATGAGATGGCTTCAGGCGGGTCACCGCACCGACGCTGAGTATTTTGGTTTCAGGTCCGCTGGGTTTCAAGCCGGACTGCTCGTCCATGT
ACCCCGTGGCCCTCTACTAATTTTTCCGTCAACAATTGGTGCCGTCTGTGGGAAATGA
Protein sequenceShow/hide protein sequence
MVGLSVDSPAAKKHRELECEEEAMVNNEFLISAEANEEVDVTIRSYSINHIDSGINFQGDYDACNQMEMKFEGDQFTWNSRRQREAQPSENDIDVVLGSISLKVTPDMNC
LLLAPYNAQEVERTIKEMFPTKVLGRDDFLAMFYQKFWHTVGPKTIASCLEILNEGKSLKGCNETNIVLILKSAFIPEASTNHKISGIVLGEECPGISHLFFADAVECCE
LKRFYYAMRWLQAGHRTDAEYFGFRSAGFQAGLLVHVPRGPLLIFPSTIGAVCGK