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Moc02g16320 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc02g16320
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionTy3/gypsy retrotransposon protein
Genome locationchr2:12283601..12286152
RNA-Seq ExpressionMoc02g16320
SyntenyMoc02g16320
Gene Ontology termsGO:0009987 - cellular process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039533.1 peroxidase 64 [Cucumis melo var. makuwa]3.9e-1151.47Show/hide
Query:  MVLGMQWLQTMEKMEADWPMLTLKFDRGGKEIVIKGDPFLARLEVSMKRLAKQWENQDEGYLVELHAL
        MVLGMQWLQ    M  DW  L + F  G  ++V+KGDP L R+E+S+K L KQW+  D GYLV+  A+
Subjt:  MVLGMQWLQTMEKMEADWPMLTLKFDRGGKEIVIKGDPFLARLEVSMKRLAKQWENQDEGYLVELHAL

KAA0061073.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]3.0e-1145.12Show/hide
Query:  VLGMQWLQTMEKMEADWPMLTLKFDRGGKEIVIKGDPFLARLEVSMKRLAKQWENQDEGYLVELHALSTHPDE---DDEMKE
        VLGMQWL T   M+ +WP LT+ F  GG++IV+KGDP L R E S++ L K W+ +D+G+L+E   +    D+    DE +E
Subjt:  VLGMQWLQTMEKMEADWPMLTLKFDRGGKEIVIKGDPFLARLEVSMKRLAKQWENQDEGYLVELHALSTHPDE---DDEMKE

KAA0061366.1 retrotransposon protein [Cucumis melo var. makuwa]8.0e-1248.68Show/hide
Query:  VLGMQWLQTMEKMEADWPMLTLKFDRGGKEIVIKGDPFLARLEVSMKRLAKQWENQDEGYLVELHALSTHPDEDDE
        VLGMQWL T   M   WP LT+ F  GG++IV+KGDP L ++E S+K LAK W++ D+G+L+E   +    +ED E
Subjt:  VLGMQWLQTMEKMEADWPMLTLKFDRGGKEIVIKGDPFLARLEVSMKRLAKQWENQDEGYLVELHALSTHPDEDDE

KAA0067037.1 transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa]3.6e-1246.34Show/hide
Query:  MVLGMQWLQTMEKMEADWPMLTLKFDRGGKEIVIKGDPFLARLEVSMKRLAKQWENQDEGYLVELHALSTHPDEDDEMKETL
        ++LGMQWL ++   E DW  L L F   GKEI IKGDP L +  +S+K L   WE +D+G+LVE HA    P  ++E +E L
Subjt:  MVLGMQWLQTMEKMEADWPMLTLKFDRGGKEIVIKGDPFLARLEVSMKRLAKQWENQDEGYLVELHALSTHPDEDDEMKETL

XP_022154744.1 uncharacterized protein LOC111021922 [Momordica charantia]1.3e-1449.37Show/hide
Query:  MVLGMQWLQTMEKMEADWPMLTLKFDRGGKEIVIKGDPFLARLEVSMKRLAKQWENQDEGYLVELHALSTHPDEDDEMK
        +VLGMQWL T   ME DW  LT+ F  G   I++KGDP L R+EV++K+LA+ WE  D+G+LVEL A S  P+  + ++
Subjt:  MVLGMQWLQTMEKMEADWPMLTLKFDRGGKEIVIKGDPFLARLEVSMKRLAKQWENQDEGYLVELHALSTHPDEDDEMK

TrEMBL top hitse value%identityAlignment
A0A5A7UYM1 Ty3/gypsy retrotransposon protein1.5e-1145.12Show/hide
Query:  VLGMQWLQTMEKMEADWPMLTLKFDRGGKEIVIKGDPFLARLEVSMKRLAKQWENQDEGYLVELHALSTHPDE---DDEMKE
        VLGMQWL T   M+ +WP LT+ F  GG++IV+KGDP L R E S++ L K W+ +D+G+L+E   +    D+    DE +E
Subjt:  VLGMQWLQTMEKMEADWPMLTLKFDRGGKEIVIKGDPFLARLEVSMKRLAKQWENQDEGYLVELHALSTHPDE---DDEMKE

A0A5A7V4F5 Retrotransposon protein3.9e-1248.68Show/hide
Query:  VLGMQWLQTMEKMEADWPMLTLKFDRGGKEIVIKGDPFLARLEVSMKRLAKQWENQDEGYLVELHALSTHPDEDDE
        VLGMQWL T   M   WP LT+ F  GG++IV+KGDP L ++E S+K LAK W++ D+G+L+E   +    +ED E
Subjt:  VLGMQWLQTMEKMEADWPMLTLKFDRGGKEIVIKGDPFLARLEVSMKRLAKQWENQDEGYLVELHALSTHPDEDDE

A0A5D3CSL4 Transposon Tf2-1 polyprotein isoform X11.9e-1145.33Show/hide
Query:  MVLGMQWLQTMEKMEADWPMLTLKFDRGGKEIVIKGDPFLARLEVSMKRLAKQWENQDEGYLVELHALSTHPDED
        +VLGMQWL ++     DW  LTL F   GK+I IKGDP L +  +S+K + K W +QDEG+L+E  A+  H + +
Subjt:  MVLGMQWLQTMEKMEADWPMLTLKFDRGGKEIVIKGDPFLARLEVSMKRLAKQWENQDEGYLVELHALSTHPDED

A0A5D3DRQ1 Transposon Tf2-1 polyprotein isoform X11.7e-1246.34Show/hide
Query:  MVLGMQWLQTMEKMEADWPMLTLKFDRGGKEIVIKGDPFLARLEVSMKRLAKQWENQDEGYLVELHALSTHPDEDDEMKETL
        ++LGMQWL ++   E DW  L L F   GKEI IKGDP L +  +S+K L   WE +D+G+LVE HA    P  ++E +E L
Subjt:  MVLGMQWLQTMEKMEADWPMLTLKFDRGGKEIVIKGDPFLARLEVSMKRLAKQWENQDEGYLVELHALSTHPDEDDEMKETL

A0A6J1DN22 Reverse transcriptase6.3e-1549.37Show/hide
Query:  MVLGMQWLQTMEKMEADWPMLTLKFDRGGKEIVIKGDPFLARLEVSMKRLAKQWENQDEGYLVELHALSTHPDEDDEMK
        +VLGMQWL T   ME DW  LT+ F  G   I++KGDP L R+EV++K+LA+ WE  D+G+LVEL A S  P+  + ++
Subjt:  MVLGMQWLQTMEKMEADWPMLTLKFDRGGKEIVIKGDPFLARLEVSMKRLAKQWENQDEGYLVELHALSTHPDEDDEMK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCTAGGGATGCAATGGCTTCAGACCATGGAGAAGATGGAAGCGGACTGGCCGATGCTCACATTGAAGTTCGACAGAGGAGGGAAAGAGATCGTAATCAAGGGTGA
TCCCTTCTTGGCCCGCTTGGAAGTCTCGATGAAAAGGTTGGCTAAACAATGGGAAAATCAAGACGAAGGGTATCTGGTGGAGTTGCATGCCCTATCCACCCATCCCGACG
AGGATGACGAAATGAAGGAAACTCTGGATGTGAAACTCAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTCTAGGGATGCAATGGCTTCAGACCATGGAGAAGATGGAAGCGGACTGGCCGATGCTCACATTGAAGTTCGACAGAGGAGGGAAAGAGATCGTAATCAAGGGTGA
TCCCTTCTTGGCCCGCTTGGAAGTCTCGATGAAAAGGTTGGCTAAACAATGGGAAAATCAAGACGAAGGGTATCTGGTGGAGTTGCATGCCCTATCCACCCATCCCGACG
AGGATGACGAAATGAAGGAAACTCTGGATGTGAAACTCAAGTGA
Protein sequenceShow/hide protein sequence
MVLGMQWLQTMEKMEADWPMLTLKFDRGGKEIVIKGDPFLARLEVSMKRLAKQWENQDEGYLVELHALSTHPDEDDEMKETLDVKLK