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Moc02g16710 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc02g16710
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionReverse transcriptase
Genome locationchr2:12575139..12575768
RNA-Seq ExpressionMoc02g16710
SyntenyMoc02g16710
Gene Ontology termsNA
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_015896950.1 uncharacterized protein LOC107430602 [Ziziphus jujuba]7.1e-2642.04Show/hide
Query:  PFLMVRIDPIVAEELIEEIEKAPFDFMECSDRQKVACATYI------------------------WDKFKEIFFKKFLPPTARQNKEAEFIKLEQGRLPL
        P  +   DP+VAEE I E+EK  F++ ECS+  KV CAT++                        W++FK +F   + P T R +K  EFI+LEQG L L
Subjt:  PFLMVRIDPIVAEELIEEIEKAPFDFMECSDRQKVACATYI------------------------WDKFKEIFFKKFLPPTARQNKEAEFIKLEQGRLPL

Query:  IEYEKKFEELSQYAPHLVDTNWSKVRQFERGFRPELRKHVATFRLMIYAKVLQTTQI
        +EYE++FE+LS++APHLVDT+  K+ +F++G RPEL  H+A F+L  Y++V++  QI
Subjt:  IEYEKKFEELSQYAPHLVDTNWSKVRQFERGFRPELRKHVATFRLMIYAKVLQTTQI

XP_022155935.1 uncharacterized protein LOC111022935 [Momordica charantia]2.2e-4375.61Show/hide
Query:  DKFKEIFFKKFLPPTARQNKEAEFIKLEQGRLPLIEYEKKFEELSQYAPHLVDTNWSKVRQFERGFRPELRKHVATFRLMIYAKVLQTTQILSQDLDNTK
        D+FKE+F+ KF P TARQNKEA+FIKLEQG+L LIEYEKKFEELS YAPHLVDT+W K R+FERG RPELRKHVA F L+  A+VLQ  QILSQDLDN K
Subjt:  DKFKEIFFKKFLPPTARQNKEAEFIKLEQGRLPLIEYEKKFEELSQYAPHLVDTNWSKVRQFERGFRPELRKHVATFRLMIYAKVLQTTQILSQDLDNTK

Query:  SFSKDGGSKRKFHGGRVRVNLIR
        S SKDGGSKRKFH G+  V LIR
Subjt:  SFSKDGGSKRKFHGGRVRVNLIR

XP_022158216.1 uncharacterized protein LOC111024753 [Momordica charantia]1.6e-5476.67Show/hide
Query:  DPIVAEELIEEIEKAPFDFMECSDRQKVACATYIWDKFKEIFFKKFLPPTARQNKEAEFIKLEQGRLPLIEYEKKFEELSQYAPHLVDTNWSKVRQFERG
        D IVAEE IEEIE   FDF+EC+DRQ+        D+FKE+FF+KF PPTARQNKEAEFIKLEQGRLP IEYEKKFEELS  APHLV+TNW K RQFERG
Subjt:  DPIVAEELIEEIEKAPFDFMECSDRQKVACATYIWDKFKEIFFKKFLPPTARQNKEAEFIKLEQGRLPLIEYEKKFEELSQYAPHLVDTNWSKVRQFERG

Query:  FRPELRKHVATFRLMIYAKVLQTTQILSQDLDNTKSFSKDGGSKRKFHGG
         RPEL+KHV  FRLM YA+VLQ TQILSQDLDNTKS  KDGGSKRKFHGG
Subjt:  FRPELRKHVATFRLMIYAKVLQTTQILSQDLDNTKSFSKDGGSKRKFHGG

XP_022857229.1 uncharacterized protein LOC111378286 [Olea europaea var. sylvestris]2.8e-2237.64Show/hide
Query:  RIDPIVAEELIEEIEKAPFDFMECSDRQKVACATYI-------------------------WDKFKEIFFKKFLPPTARQNKEAEFIKLEQGRLPLIEYE
        + DP+ AEE I  +E+  F  + C+D QKV CA ++                         W +FKE    K+ P   R  KE EF++L QG+  L EYE
Subjt:  RIDPIVAEELIEEIEKAPFDFMECSDRQKVACATYI-------------------------WDKFKEIFFKKFLPPTARQNKEAEFIKLEQGRLPLIEYE

Query:  KKFEELSQYAPHLVDTNWSKVRQFERGFRPELRKHVATFRLMIYAKVLQTTQILSQ--DLDNTKSFSKDGGSKRKFHG
        +KFE+LS+YAPHLVDT   K R+FE G RPE+   +A+ +   Y  VLQT Q +S   ++D       +   KRK++G
Subjt:  KKFEELSQYAPHLVDTNWSKVRQFERGFRPELRKHVATFRLMIYAKVLQTTQILSQ--DLDNTKSFSKDGGSKRKFHG

XP_022866463.1 uncharacterized protein LOC111386240 [Olea europaea var. sylvestris]2.1e-2237.16Show/hide
Query:  PFLMVRIDPIVAEELIEEIEKAPFDFMECSDRQKVACATYI-------------------------WDKFKEIFFKKFLPPTARQNKEAEFIKLEQGRLP
        P L  R DP  AEE +  +E   F+ M C+D QKV+CA ++                         W++FKE    K+ P + +  KE EF++L QG LP
Subjt:  PFLMVRIDPIVAEELIEEIEKAPFDFMECSDRQKVACATYI-------------------------WDKFKEIFFKKFLPPTARQNKEAEFIKLEQGRLP

Query:  LIEYEKKFEELSQYAPHLVDTNWSKVRQFERGFRPELRKHVATFRLMIYAKVLQTTQILSQDLDNTKSF--SKDGGSKRKFHG
        L EYE+KFE LS YAPH V+T  +K ++FE G RPE++  +A  +   YA+V++  Q++S  L   K    S +   KRK+ G
Subjt:  LIEYEKKFEELSQYAPHLVDTNWSKVRQFERGFRPELRKHVATFRLMIYAKVLQTTQILSQDLDNTKSF--SKDGGSKRKFHG

TrEMBL top hitse value%identityAlignment
A0A2N9HSP5 CRAL-TRIO domain-containing protein2.4e-1931.98Show/hide
Query:  MQQLMESIVWWNSSESS--IHPFLMVRIDPIVAEELIEEIEKAPFDFMECSDRQKVACATYI------------------------WDKFKEIFFKKFLP
        M QLM++++  N +E      P     ++P+VAE+ + E+EKA F  + C + +KV  ATY+                        W+ FK  F++K+ P
Subjt:  MQQLMESIVWWNSSESS--IHPFLMVRIDPIVAEELIEEIEKAPFDFMECSDRQKVACATYI------------------------WDKFKEIFFKKFLP

Query:  PTARQNKEAEFIKLEQGRLPLIEYEKKFEELSQYAPHLVDTNWSKVRQFERGFRPELRKHVATFRLMIYAKVLQTTQILSQDLDNTKSFSKDGGSKR
         + R  KE EFIK+EQG + + +YE +F  L+++AP LV    SK R+FE G RP ++  V  F L  Y  V+    ++ + L+ T++   D   K+
Subjt:  PTARQNKEAEFIKLEQGRLPLIEYEKKFEELSQYAPHLVDTNWSKVRQFERGFRPELRKHVATFRLMIYAKVLQTTQILSQDLDNTKSFSKDGGSKR

A0A6J1DNX0 uncharacterized protein LOC1110229351.1e-4375.61Show/hide
Query:  DKFKEIFFKKFLPPTARQNKEAEFIKLEQGRLPLIEYEKKFEELSQYAPHLVDTNWSKVRQFERGFRPELRKHVATFRLMIYAKVLQTTQILSQDLDNTK
        D+FKE+F+ KF P TARQNKEA+FIKLEQG+L LIEYEKKFEELS YAPHLVDT+W K R+FERG RPELRKHVA F L+  A+VLQ  QILSQDLDN K
Subjt:  DKFKEIFFKKFLPPTARQNKEAEFIKLEQGRLPLIEYEKKFEELSQYAPHLVDTNWSKVRQFERGFRPELRKHVATFRLMIYAKVLQTTQILSQDLDNTK

Query:  SFSKDGGSKRKFHGGRVRVNLIR
        S SKDGGSKRKFH G+  V LIR
Subjt:  SFSKDGGSKRKFHGGRVRVNLIR

A0A6J1E0B5 uncharacterized protein LOC1110247537.8e-5576.67Show/hide
Query:  DPIVAEELIEEIEKAPFDFMECSDRQKVACATYIWDKFKEIFFKKFLPPTARQNKEAEFIKLEQGRLPLIEYEKKFEELSQYAPHLVDTNWSKVRQFERG
        D IVAEE IEEIE   FDF+EC+DRQ+        D+FKE+FF+KF PPTARQNKEAEFIKLEQGRLP IEYEKKFEELS  APHLV+TNW K RQFERG
Subjt:  DPIVAEELIEEIEKAPFDFMECSDRQKVACATYIWDKFKEIFFKKFLPPTARQNKEAEFIKLEQGRLPLIEYEKKFEELSQYAPHLVDTNWSKVRQFERG

Query:  FRPELRKHVATFRLMIYAKVLQTTQILSQDLDNTKSFSKDGGSKRKFHGG
         RPEL+KHV  FRLM YA+VLQ TQILSQDLDNTKS  KDGGSKRKFHGG
Subjt:  FRPELRKHVATFRLMIYAKVLQTTQILSQDLDNTKSFSKDGGSKRKFHGG

A0A6P4AUI0 uncharacterized protein LOC1074339191.1e-1945.97Show/hide
Query:  FDFMECSDRQKVACATYI--------WDKFKEIFFKKFLPP--TARQNKEAEFIKLEQGRLPLIEYEKKFEELSQYAPHLVDTNWSKVRQFERGFRPELR
        F+FMEC+D +KV CA Y+        W+     +  +  P   T R NK AEFI+L+QG++ L +YE+KF+ELS+YAPHLVDT+  K ++FE+G R  LR
Subjt:  FDFMECSDRQKVACATYI--------WDKFKEIFFKKFLPP--TARQNKEAEFIKLEQGRLPLIEYEKKFEELSQYAPHLVDTNWSKVRQFERGFRPELR

Query:  KHVATFRLMIYAKVLQTTQILSQD
        + +   RL  Y  VLQ  QIL  D
Subjt:  KHVATFRLMIYAKVLQTTQILSQD

A0A6P4B4I6 uncharacterized protein LOC1074306023.4e-2642.04Show/hide
Query:  PFLMVRIDPIVAEELIEEIEKAPFDFMECSDRQKVACATYI------------------------WDKFKEIFFKKFLPPTARQNKEAEFIKLEQGRLPL
        P  +   DP+VAEE I E+EK  F++ ECS+  KV CAT++                        W++FK +F   + P T R +K  EFI+LEQG L L
Subjt:  PFLMVRIDPIVAEELIEEIEKAPFDFMECSDRQKVACATYI------------------------WDKFKEIFFKKFLPPTARQNKEAEFIKLEQGRLPL

Query:  IEYEKKFEELSQYAPHLVDTNWSKVRQFERGFRPELRKHVATFRLMIYAKVLQTTQI
        +EYE++FE+LS++APHLVDT+  K+ +F++G RPEL  H+A F+L  Y++V++  QI
Subjt:  IEYEKKFEELSQYAPHLVDTNWSKVRQFERGFRPELRKHVATFRLMIYAKVLQTTQI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAACAGCTAATGGAGTCAATCGTGTGGTGGAACAGTTCAGAAAGCTCCATCCACCCTTTTTTGATGGTACGCATAGATCCAATTGTTGCTGAAGAATTGATCGAGGA
AATCGAGAAGGCGCCTTTTGACTTTATGGAATGCAGTGATCGTCAGAAAGTGGCCTGTGCTACATACATCTGGGATAAGTTCAAGGAAATTTTCTTTAAGAAGTTCCTTC
CCCCGACTGCTAGACAGAACAAGGAAGCGGAGTTTATCAAGTTAGAGCAAGGAAGACTGCCCCTGATAGAGTATGAAAAGAAGTTCGAGGAGCTTTCTCAGTACGCCCCT
CATTTGGTGGACACTAATTGGAGCAAAGTAAGACAATTTGAAAGAGGTTTTAGACCAGAATTAAGGAAGCATGTTGCTACCTTCAGATTGATGATCTATGCCAAGGTGTT
GCAAACAACTCAGATCTTGTCACAGGATTTGGACAACACGAAGTCATTTTCCAAGGATGGTGGGTCAAAAAGGAAGTTCCATGGGGGTAGAGTTCGAGTCAACCTCATAA
GAGTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCAACAGCTAATGGAGTCAATCGTGTGGTGGAACAGTTCAGAAAGCTCCATCCACCCTTTTTTGATGGTACGCATAGATCCAATTGTTGCTGAAGAATTGATCGAGGA
AATCGAGAAGGCGCCTTTTGACTTTATGGAATGCAGTGATCGTCAGAAAGTGGCCTGTGCTACATACATCTGGGATAAGTTCAAGGAAATTTTCTTTAAGAAGTTCCTTC
CCCCGACTGCTAGACAGAACAAGGAAGCGGAGTTTATCAAGTTAGAGCAAGGAAGACTGCCCCTGATAGAGTATGAAAAGAAGTTCGAGGAGCTTTCTCAGTACGCCCCT
CATTTGGTGGACACTAATTGGAGCAAAGTAAGACAATTTGAAAGAGGTTTTAGACCAGAATTAAGGAAGCATGTTGCTACCTTCAGATTGATGATCTATGCCAAGGTGTT
GCAAACAACTCAGATCTTGTCACAGGATTTGGACAACACGAAGTCATTTTCCAAGGATGGTGGGTCAAAAAGGAAGTTCCATGGGGGTAGAGTTCGAGTCAACCTCATAA
GAGTGTAG
Protein sequenceShow/hide protein sequence
MQQLMESIVWWNSSESSIHPFLMVRIDPIVAEELIEEIEKAPFDFMECSDRQKVACATYIWDKFKEIFFKKFLPPTARQNKEAEFIKLEQGRLPLIEYEKKFEELSQYAP
HLVDTNWSKVRQFERGFRPELRKHVATFRLMIYAKVLQTTQILSQDLDNTKSFSKDGGSKRKFHGGRVRVNLIRV