| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0038241.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 1.4e-39 | 59.09 | Show/hide |
Query: SGKALADLSKLEPLDGSNYRRWSQKLLIFFEQLEIDYILTTAQPPSSPQPPLLTSLPPRLQLR-----LLIPERPLLLSVRKDKRPTPQANLAETDDIIA
S K L DLSKLEPLDG+NYRRWS+KLLIFFEQLE+DY+LTT P S P TS P +I +R R ++PTPQANLAE D I
Subjt: SGKALADLSKLEPLDGSNYRRWSQKLLIFFEQLEIDYILTTAQPPSSPQPPLLTSLPPRLQLR-----LLIPERPLLLSVRKDKRPTPQANLAETDDIIA
Query: TVVVEANLVENKSNWILDTGASRHFCSNRELFHDFQDSFDGECVFMGNSTTAGV
+VE NL+ENK++WILDTGASR+FC+NREL HD++D+ DGECV M N TTAGV
Subjt: TVVVEANLVENKSNWILDTGASRHFCSNRELFHDFQDSFDGECVFMGNSTTAGV
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| KAA0041580.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 3.0e-29 | 40.37 | Show/hide |
Query: SGKALADLSKLEPLDGSNYRRWSQKLLIFFEQLEIDYILTTAQPPSSP--------QPPLLTSLPPRLQL-------RLLIPER----------------
S K L DLSKLEPLDG+NYR WSQKLLIFFEQLE+DY+LTT P S P P T P + + +++ PE+
Subjt: SGKALADLSKLEPLDGSNYRRWSQKLLIFFEQLEIDYILTTAQPPSSP--------QPPLLTSLPPRLQL-------RLLIPER----------------
Query: --PL------------LLSVRKDKRPTPQAN------------------------LAETDDIIATVVVEANLVENKSNWILDTGASRHFCSNRELFHDFQ
P+ + S + + T Q ++E D I ++EANL+ENK++WILDTGASRHFC+ REL HD++
Subjt: --PL------------LLSVRKDKRPTPQAN------------------------LAETDDIIATVVVEANLVENKSNWILDTGASRHFCSNRELFHDFQ
Query: DSFDGECVFMGNSTTAGV
D+ DGECVFMGNS TAGV
Subjt: DSFDGECVFMGNSTTAGV
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| KAA0045258.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 9.7e-28 | 38.84 | Show/hide |
Query: MATIGSGKALADLSKLEPLDGSNYRRWSQKLLIFFEQLEIDYILTTAQPPSSPQ--------------PPLLTSLPPRLQLRLLIPERPL----------
M+ + S K L DLSKLEPLDG+NYRRWSQKLLIFF+QLE+DY+LTT P S P PP ++ +++ +I
Subjt: MATIGSGKALADLSKLEPLDGSNYRRWSQKLLIFFEQLEIDYILTTAQPPSSPQ--------------PPLLTSLPPRLQLRLLIPERPL----------
Query: --------LLSVRKDKRPT--------------------------------------PQANLAETDDIIATVVVEANLVENKSNWILDTGASRHFCSNRE
+ + +D R T +AN + ++IIA +VEANL+ENK++WILDT ASRHF +NRE
Subjt: --------LLSVRKDKRPT--------------------------------------PQANLAETDDIIATVVVEANLVENKSNWILDTGASRHFCSNRE
Query: LFHDFQDSFDGECVFMGNSTTAGV
L HD++D+ DGECVFM NS TAGV
Subjt: LFHDFQDSFDGECVFMGNSTTAGV
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| KAA0048277.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 3.0e-29 | 35.61 | Show/hide |
Query: SGKALADLSKLEPLDGSNYRRWSQKLLIFFEQLEIDYILTTAQPPSSPQPPLLTSLPPR-----------------------------------------
S K L DLSKLEPLDG+NYRRWSQKLLIFFEQLE+DY+LTT P P TS P
Subjt: SGKALADLSKLEPLDGSNYRRWSQKLLIFFEQLEIDYILTTAQPPSSPQPPLLTSLPPR-----------------------------------------
Query: ----------------------------------------LQLRLL----------------------------IPERPLLLSV----------------
LQ ++ I E +LL
Subjt: ----------------------------------------LQLRLL----------------------------IPERPLLLSV----------------
Query: ----RKDKRPTPQANLAETDDIIATVVVEANLVENKSNWILDTGASRHFCSNRELFHDFQDSFDGECVFMGNSTTAGV
R ++PTPQANLAE D I +VEANL+ENK++WILDTGASRHFC+NREL HD++D+ DGECVFMGNS TAGV
Subjt: ----RKDKRPTPQANLAETDDIIATVVVEANLVENKSNWILDTGASRHFCSNRELFHDFQDSFDGECVFMGNSTTAGV
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| TYK30642.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 4.3e-28 | 36.72 | Show/hide |
Query: SGKALADLSKLEPLDGSNYRRWSQKLLIFFEQLEIDYILTTAQPPSSPQPPLLTSLPPR-----------------------------------------
S K L DLSKLEPLDG+NYRRWS+KLLIFFEQLE DY+LTT S P TS P
Subjt: SGKALADLSKLEPLDGSNYRRWSQKLLIFFEQLEIDYILTTAQPPSSPQPPLLTSLPPR-----------------------------------------
Query: --------------------------------LQLRLLIPERPL--------LLSVRKD--------------------------KRPTPQANLAETDDI
LQ +L+ + PL L +KD ++PTPQANLAE D
Subjt: --------------------------------LQLRLLIPERPL--------LLSVRKD--------------------------KRPTPQANLAETDDI
Query: IATVVVEANLVENKSNWILDTGASRHFCSNRELFHDFQDSFDGECVFMGNSTTAGV
I +VEANL+ENK++WILDTGASR+FC+NREL HD++D+ DGECV M N T GV
Subjt: IATVVVEANLVENKSNWILDTGASRHFCSNRELFHDFQDSFDGECVFMGNSTTAGV
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7T9C8 Ty1-copia retrotransposon protein | 7.0e-40 | 59.09 | Show/hide |
Query: SGKALADLSKLEPLDGSNYRRWSQKLLIFFEQLEIDYILTTAQPPSSPQPPLLTSLPPRLQLR-----LLIPERPLLLSVRKDKRPTPQANLAETDDIIA
S K L DLSKLEPLDG+NYRRWS+KLLIFFEQLE+DY+LTT P S P TS P +I +R R ++PTPQANLAE D I
Subjt: SGKALADLSKLEPLDGSNYRRWSQKLLIFFEQLEIDYILTTAQPPSSPQPPLLTSLPPRLQLR-----LLIPERPLLLSVRKDKRPTPQANLAETDDIIA
Query: TVVVEANLVENKSNWILDTGASRHFCSNRELFHDFQDSFDGECVFMGNSTTAGV
+VE NL+ENK++WILDTGASR+FC+NREL HD++D+ DGECV M N TTAGV
Subjt: TVVVEANLVENKSNWILDTGASRHFCSNRELFHDFQDSFDGECVFMGNSTTAGV
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| A0A5A7TQW7 Ty1-copia retrotransposon protein | 4.7e-28 | 38.84 | Show/hide |
Query: MATIGSGKALADLSKLEPLDGSNYRRWSQKLLIFFEQLEIDYILTTAQPPSSPQ--------------PPLLTSLPPRLQLRLLIPERPL----------
M+ + S K L DLSKLEPLDG+NYRRWSQKLLIFF+QLE+DY+LTT P S P PP ++ +++ +I
Subjt: MATIGSGKALADLSKLEPLDGSNYRRWSQKLLIFFEQLEIDYILTTAQPPSSPQ--------------PPLLTSLPPRLQLRLLIPERPL----------
Query: --------LLSVRKDKRPT--------------------------------------PQANLAETDDIIATVVVEANLVENKSNWILDTGASRHFCSNRE
+ + +D R T +AN + ++IIA +VEANL+ENK++WILDT ASRHF +NRE
Subjt: --------LLSVRKDKRPT--------------------------------------PQANLAETDDIIATVVVEANLVENKSNWILDTGASRHFCSNRE
Query: LFHDFQDSFDGECVFMGNSTTAGV
L HD++D+ DGECVFM NS TAGV
Subjt: LFHDFQDSFDGECVFMGNSTTAGV
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| A0A5A7U214 Ty1-copia retrotransposon protein | 1.5e-29 | 35.61 | Show/hide |
Query: SGKALADLSKLEPLDGSNYRRWSQKLLIFFEQLEIDYILTTAQPPSSPQPPLLTSLPPR-----------------------------------------
S K L DLSKLEPLDG+NYRRWSQKLLIFFEQLE+DY+LTT P P TS P
Subjt: SGKALADLSKLEPLDGSNYRRWSQKLLIFFEQLEIDYILTTAQPPSSPQPPLLTSLPPR-----------------------------------------
Query: ----------------------------------------LQLRLL----------------------------IPERPLLLSV----------------
LQ ++ I E +LL
Subjt: ----------------------------------------LQLRLL----------------------------IPERPLLLSV----------------
Query: ----RKDKRPTPQANLAETDDIIATVVVEANLVENKSNWILDTGASRHFCSNRELFHDFQDSFDGECVFMGNSTTAGV
R ++PTPQANLAE D I +VEANL+ENK++WILDTGASRHFC+NREL HD++D+ DGECVFMGNS TAGV
Subjt: ----RKDKRPTPQANLAETDDIIATVVVEANLVENKSNWILDTGASRHFCSNRELFHDFQDSFDGECVFMGNSTTAGV
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| A0A5D3D7X7 Ty1-copia retrotransposon protein | 1.5e-29 | 40.37 | Show/hide |
Query: SGKALADLSKLEPLDGSNYRRWSQKLLIFFEQLEIDYILTTAQPPSSP--------QPPLLTSLPPRLQL-------RLLIPER----------------
S K L DLSKLEPLDG+NYR WSQKLLIFFEQLE+DY+LTT P S P P T P + + +++ PE+
Subjt: SGKALADLSKLEPLDGSNYRRWSQKLLIFFEQLEIDYILTTAQPPSSP--------QPPLLTSLPPRLQL-------RLLIPER----------------
Query: --PL------------LLSVRKDKRPTPQAN------------------------LAETDDIIATVVVEANLVENKSNWILDTGASRHFCSNRELFHDFQ
P+ + S + + T Q ++E D I ++EANL+ENK++WILDTGASRHFC+ REL HD++
Subjt: --PL------------LLSVRKDKRPTPQAN------------------------LAETDDIIATVVVEANLVENKSNWILDTGASRHFCSNRELFHDFQ
Query: DSFDGECVFMGNSTTAGV
D+ DGECVFMGNS TAGV
Subjt: DSFDGECVFMGNSTTAGV
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| A0A5D3E411 Ty1-copia retrotransposon protein | 2.1e-28 | 36.72 | Show/hide |
Query: SGKALADLSKLEPLDGSNYRRWSQKLLIFFEQLEIDYILTTAQPPSSPQPPLLTSLPPR-----------------------------------------
S K L DLSKLEPLDG+NYRRWS+KLLIFFEQLE DY+LTT S P TS P
Subjt: SGKALADLSKLEPLDGSNYRRWSQKLLIFFEQLEIDYILTTAQPPSSPQPPLLTSLPPR-----------------------------------------
Query: --------------------------------LQLRLLIPERPL--------LLSVRKD--------------------------KRPTPQANLAETDDI
LQ +L+ + PL L +KD ++PTPQANLAE D
Subjt: --------------------------------LQLRLLIPERPL--------LLSVRKD--------------------------KRPTPQANLAETDDI
Query: IATVVVEANLVENKSNWILDTGASRHFCSNRELFHDFQDSFDGECVFMGNSTTAGV
I +VEANL+ENK++WILDTGASR+FC+NREL HD++D+ DGECV M N T GV
Subjt: IATVVVEANLVENKSNWILDTGASRHFCSNRELFHDFQDSFDGECVFMGNSTTAGV
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