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Moc02g16910 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc02g16910
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionReverse transcriptase
Genome locationchr2:12702344..12708424
RNA-Seq ExpressionMoc02g16910
SyntenyMoc02g16910
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG8485946.1 hypothetical protein CXB51_020224 [Gossypium anomalum]1.0e-2846.45Show/hide
Query:  KSQAASLRHLESRVGQLAMDLKSRSVGALPSDTEVPKRDGKEQCKTLTLRSGKALPPAHPIAPAAIKKPSQVDQGETYQ-SVNPVIARAPETGSTQNRVP
        +SQ  +L++L++++GQLA +LK+R  GALPSDTE  +  GKE CKTLTLRSGK +    P    A K+P+     E  Q SV   I++ PE+      +P
Subjt:  KSQAASLRHLESRVGQLAMDLKSRSVGALPSDTEVPKRDGKEQCKTLTLRSGKALPPAHPIAPAAIKKPSQVDQGETYQ-SVNPVIARAPETGSTQNRVP

Query:  EKRKQ------------VEHDNALAEYRPTPPYPKRLQKKEQNVQFNKFLDVLKQLHVNIPLVEALEQMPN-YSLDLTNPKLE
        E                 + +  ++  +P PPYP+RLQK++Q +QF KFLDVLKQLH+NIPLVEALEQMPN Y  D   PKL+
Subjt:  EKRKQ------------VEHDNALAEYRPTPPYPKRLQKKEQNVQFNKFLDVLKQLHVNIPLVEALEQMPN-YSLDLTNPKLE

XP_022144016.1 uncharacterized protein LOC111013805 [Momordica charantia]4.5e-3753.68Show/hide
Query:  KSQAASLRHLESRVGQLAMDLKSRSVGALPSDTEVPKRDGKEQCKTLTLRSGKALPPAHPIAPAAIKKPSQVDQGETY----------------------
        +SQ ASLR+LE +VGQLAMDLKSRS+GA PSDTEVPKRDGKEQCK LTLRSGKALPP H  APA  K+ ++VD GET                       
Subjt:  KSQAASLRHLESRVGQLAMDLKSRSVGALPSDTEVPKRDGKEQCKTLTLRSGKALPPAHPIAPAAIKKPSQVDQGETY----------------------

Query:  ---------QSVNPVIARAPETGSTQNRVPEKRKQVEHDNALAEYRPTPPYPKRLQKKEQNVQFNKFLDVLKQLHVNIPLVEALEQMPNY
                 QSVNPVI RAPETG                                 KKEQN +F KFLDVLKQLHVN+PLVEALEQMPNY
Subjt:  ---------QSVNPVIARAPETGSTQNRVPEKRKQVEHDNALAEYRPTPPYPKRLQKKEQNVQFNKFLDVLKQLHVNIPLVEALEQMPNY

XP_022155097.1 uncharacterized protein LOC111022229 [Momordica charantia]2.9e-4478.4Show/hide
Query:  KRDGKEQCKTLTLRSGKALPPAHPIAPAAIKKPSQVDQGETY--QSVNPVIARAPETGSTQNRVPEKRKQVEHDNALAEYRPTPPYPKRLQKKEQNVQFN
        KRDGKEQ K LTLR+GKALPP H  A A+IK+P+QV QGET   Q ++P+I+RAPE GSTQNRVPEKRKQ EH+NALAEYR TPPYPKRLQKK+QNVQF 
Subjt:  KRDGKEQCKTLTLRSGKALPPAHPIAPAAIKKPSQVDQGETY--QSVNPVIARAPETGSTQNRVPEKRKQVEHDNALAEYRPTPPYPKRLQKKEQNVQFN

Query:  KFLDVLKQLHVNIPLVEALEQMPNY
        KFLD LKQLHV IPLVEALEQMPNY
Subjt:  KFLDVLKQLHVNIPLVEALEQMPNY

XP_022158598.1 uncharacterized protein LOC111025053 [Momordica charantia]5.8e-2954.9Show/hide
Query:  TMLEHPMLQHFS------KSQAASLRHLESRVGQLAMDLKSRSVGALPSDTEVPKRDGKEQCKTLTLRSGKALPPAHPIAPAAIKKPSQVDQGE------
        T LE+ M Q+ +      +SQAASLR+LE +VGQLAMDLKSR VGALPSDTEVPKRD KEQC  LTLRSGKALPP HP AP   K+P+Q+ QGE      
Subjt:  TMLEHPMLQHFS------KSQAASLRHLESRVGQLAMDLKSRSVGALPSDTEVPKRDGKEQCKTLTLRSGKALPPAHPIAPAAIKKPSQVDQGE------

Query:  -------------------------TYQSVNPVIARAPETGSTQNRVPEKRKQ
                                 + QSVNPVIARAPETGS+QN +PEK  +
Subjt:  -------------------------TYQSVNPVIARAPETGSTQNRVPEKRKQ

XP_022158740.1 uncharacterized protein LOC111025203 [Momordica charantia]5.8e-2950.86Show/hide
Query:  LEHPMLQHFSK------SQAASLRHLESRVGQLAMDLKSRSVGALPSDTEVPKRDGKEQCKTLTLRSGKALPPAHPIAPAAIKKPSQVDQGETYQSVNPV
        LE+ M Q+  K      S AASLR+LE +VGQLA DLKSR  GALPSDT+V      EQ K                            Q    + VNPV
Subjt:  LEHPMLQHFSK------SQAASLRHLESRVGQLAMDLKSRSVGALPSDTEVPKRDGKEQCKTLTLRSGKALPPAHPIAPAAIKKPSQVDQGETYQSVNPV

Query:  IARAPETGSTQNRVPEKRKQVEHDNALAEYRPTPPYPKRLQKKEQNVQFNKFLDVLKQLHVNIPLVEALEQMPNY
         A+A   G++  +V EKRK++EH++A  E+RPTPPYPKRL+KKEQ+VQF KFLDVL QLHVNIPLVEA EQM  Y
Subjt:  IARAPETGSTQNRVPEKRKQVEHDNALAEYRPTPPYPKRLQKKEQNVQFNKFLDVLKQLHVNIPLVEALEQMPNY

TrEMBL top hitse value%identityAlignment
A0A6J1CS22 uncharacterized protein LOC1110138052.2e-3753.68Show/hide
Query:  KSQAASLRHLESRVGQLAMDLKSRSVGALPSDTEVPKRDGKEQCKTLTLRSGKALPPAHPIAPAAIKKPSQVDQGETY----------------------
        +SQ ASLR+LE +VGQLAMDLKSRS+GA PSDTEVPKRDGKEQCK LTLRSGKALPP H  APA  K+ ++VD GET                       
Subjt:  KSQAASLRHLESRVGQLAMDLKSRSVGALPSDTEVPKRDGKEQCKTLTLRSGKALPPAHPIAPAAIKKPSQVDQGETY----------------------

Query:  ---------QSVNPVIARAPETGSTQNRVPEKRKQVEHDNALAEYRPTPPYPKRLQKKEQNVQFNKFLDVLKQLHVNIPLVEALEQMPNY
                 QSVNPVI RAPETG                                 KKEQN +F KFLDVLKQLHVN+PLVEALEQMPNY
Subjt:  ---------QSVNPVIARAPETGSTQNRVPEKRKQVEHDNALAEYRPTPPYPKRLQKKEQNVQFNKFLDVLKQLHVNIPLVEALEQMPNY

A0A6J1DNF6 uncharacterized protein LOC1110222291.4e-4478.4Show/hide
Query:  KRDGKEQCKTLTLRSGKALPPAHPIAPAAIKKPSQVDQGETY--QSVNPVIARAPETGSTQNRVPEKRKQVEHDNALAEYRPTPPYPKRLQKKEQNVQFN
        KRDGKEQ K LTLR+GKALPP H  A A+IK+P+QV QGET   Q ++P+I+RAPE GSTQNRVPEKRKQ EH+NALAEYR TPPYPKRLQKK+QNVQF 
Subjt:  KRDGKEQCKTLTLRSGKALPPAHPIAPAAIKKPSQVDQGETY--QSVNPVIARAPETGSTQNRVPEKRKQVEHDNALAEYRPTPPYPKRLQKKEQNVQFN

Query:  KFLDVLKQLHVNIPLVEALEQMPNY
        KFLD LKQLHV IPLVEALEQMPNY
Subjt:  KFLDVLKQLHVNIPLVEALEQMPNY

A0A6J1DWK1 uncharacterized protein LOC1110250532.8e-2954.9Show/hide
Query:  TMLEHPMLQHFS------KSQAASLRHLESRVGQLAMDLKSRSVGALPSDTEVPKRDGKEQCKTLTLRSGKALPPAHPIAPAAIKKPSQVDQGE------
        T LE+ M Q+ +      +SQAASLR+LE +VGQLAMDLKSR VGALPSDTEVPKRD KEQC  LTLRSGKALPP HP AP   K+P+Q+ QGE      
Subjt:  TMLEHPMLQHFS------KSQAASLRHLESRVGQLAMDLKSRSVGALPSDTEVPKRDGKEQCKTLTLRSGKALPPAHPIAPAAIKKPSQVDQGE------

Query:  -------------------------TYQSVNPVIARAPETGSTQNRVPEKRKQ
                                 + QSVNPVIARAPETGS+QN +PEK  +
Subjt:  -------------------------TYQSVNPVIARAPETGSTQNRVPEKRKQ

A0A6J1DWN2 uncharacterized protein LOC1110252032.8e-2950.86Show/hide
Query:  LEHPMLQHFSK------SQAASLRHLESRVGQLAMDLKSRSVGALPSDTEVPKRDGKEQCKTLTLRSGKALPPAHPIAPAAIKKPSQVDQGETYQSVNPV
        LE+ M Q+  K      S AASLR+LE +VGQLA DLKSR  GALPSDT+V      EQ K                            Q    + VNPV
Subjt:  LEHPMLQHFSK------SQAASLRHLESRVGQLAMDLKSRSVGALPSDTEVPKRDGKEQCKTLTLRSGKALPPAHPIAPAAIKKPSQVDQGETYQSVNPV

Query:  IARAPETGSTQNRVPEKRKQVEHDNALAEYRPTPPYPKRLQKKEQNVQFNKFLDVLKQLHVNIPLVEALEQMPNY
         A+A   G++  +V EKRK++EH++A  E+RPTPPYPKRL+KKEQ+VQF KFLDVL QLHVNIPLVEA EQM  Y
Subjt:  IARAPETGSTQNRVPEKRKQVEHDNALAEYRPTPPYPKRLQKKEQNVQFNKFLDVLKQLHVNIPLVEALEQMPNY

A0A6J1GJ68 uncharacterized protein LOC1114543445.0e-2640.45Show/hide
Query:  KSQAASLRHLESRVGQLAMDLKSRSVGALPSDTEVPKRDGKEQCKTLTLRSGKALPPAHPIAPAAIKKPSQVDQGETYQSVNPVIARAPETGSTQNRVPE
        +SQ ASL++LE +VGQLA +L++R +G LP+DTE PKR+GKEQC+ + LRSGK +P                +QG+++         + ET  TQ R  E
Subjt:  KSQAASLRHLESRVGQLAMDLKSRSVGALPSDTEVPKRDGKEQCKTLTLRSGKALPPAHPIAPAAIKKPSQVDQGETYQSVNPVIARAPETGSTQNRVPE

Query:  KRKQVEHDNALAE-------------------YRPTPPYPKRLQKKEQNVQFNKFLDVLKQLHVNIPLVEALEQMPNY
           Q EH    A+                   Y P+PP+P+R+++K++   F KF+D+LK++H+NIP VEAL+QMPNY
Subjt:  KRKQVEHDNALAE-------------------YRPTPPYPKRLQKKEQNVQFNKFLDVLKQLHVNIPLVEALEQMPNY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCCCCTGGACTTCACGTCAATCGCGACCTTCTAGGTGCTATTGAGCACTTAACCGTCGCCTTGGGGAGGCGATCTGAGCCGCTGGCGAGGGGACAAGTTAGTTC
CGGGTCGAGGCCTAGAAGCTCGGAGGAGAGCTTCGGGCAACCCTTAGAGGAGTCCCCACCCTTGGCGTCCTCGAGCGGTAGGTCGGCCTCCGTCTGGTCATCGCCTGCTG
AGTCCTTCAGTAACAGTGGTCAAATAGACAAGATGTTCTTCCTGAGTCAGTATACTATTTGGGGAACCCGCAAAATAGTAGAAACAATCCATATTCGAACACTTACAATC
CTGACTAGAGGAATCACCCCAATTTTAGTTGGAATGACAATCAAGGAGGACACAATGCTGGAACATCCAATGCTCCAGCATTTTAGCAAAAGCCAGGCTGCATCATTAAG
GCACCTAGAGTCGCGAGTAGGCCAGTTAGCTATGGATTTGAAGAGCAGATCGGTTGGAGCATTGCCTAGCGATACAGAAGTGCCAAAGAGAGATGGTAAGGAACAATGCA
AGACCCTCACTCTGCGAAGTGGGAAAGCATTACCTCCGGCGCACCCAATTGCTCCAGCAGCGATCAAGAAACCTAGTCAAGTTGACCAAGGAGAAACTTATCAATCAGTT
AATCCAGTAATTGCTAGAGCACCTGAGACAGGGTCTACACAGAACAGAGTGCCCGAGAAAAGAAAGCAGGTAGAGCATGATAATGCTCTGGCAGAATACAGGCCAACACC
ACCATATCCTAAACGGTTGCAGAAGAAAGAGCAGAATGTTCAATTCAATAAGTTTTTAGATGTCTTGAAGCAACTGCACGTGAACATACCGTTGGTGGAAGCTCTAGAGC
AAATGCCAAATTATTCTTTAGACCTCACAAACCCGAAGCTTGAATTACTGAAGCCATCTATTAAAGAGCCGCCGGTGTTGGAGCTTAAAGCCTTGCCGCAACATCTGTTA
AATGGATTACTTTCAAAAAGGGCCGGCAGTGATGACTACGTGATGTCGCTGACACGAAAGGACAAGGGAGGTGAGAACATTAGGGCGTGGCAGGCATGCAGAAAGGTATT
TATAGCAAATTTCGACTTCCATGGAGAAAGAATCAAACACAAGGCGAATAGAAAGAGAGCGATGAAACTGGAACTTTCAGGGATTTATGGGTCGAGCGGTGACTTCATGG
AGGTCACTGAAACCATTCTGTCGGAGGCCTCTGATGAGCAGAGCCCCGCCCAGCAAAGCCCCACCAGCTCGGAGCACACTCTGGCTGACTCTGAGCTTCCGCCGCCGCCT
CTTCCTGTCGCCAGCCCTTGGGTAAACGCCCCTGACCCTACTGCCTCCTCCTCTCAGACCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTGCCCCTGGACTTCACGTCAATCGCGACCTTCTAGGTGCTATTGAGCACTTAACCGTCGCCTTGGGGAGGCGATCTGAGCCGCTGGCGAGGGGACAAGTTAGTTC
CGGGTCGAGGCCTAGAAGCTCGGAGGAGAGCTTCGGGCAACCCTTAGAGGAGTCCCCACCCTTGGCGTCCTCGAGCGGTAGGTCGGCCTCCGTCTGGTCATCGCCTGCTG
AGTCCTTCAGTAACAGTGGTCAAATAGACAAGATGTTCTTCCTGAGTCAGTATACTATTTGGGGAACCCGCAAAATAGTAGAAACAATCCATATTCGAACACTTACAATC
CTGACTAGAGGAATCACCCCAATTTTAGTTGGAATGACAATCAAGGAGGACACAATGCTGGAACATCCAATGCTCCAGCATTTTAGCAAAAGCCAGGCTGCATCATTAAG
GCACCTAGAGTCGCGAGTAGGCCAGTTAGCTATGGATTTGAAGAGCAGATCGGTTGGAGCATTGCCTAGCGATACAGAAGTGCCAAAGAGAGATGGTAAGGAACAATGCA
AGACCCTCACTCTGCGAAGTGGGAAAGCATTACCTCCGGCGCACCCAATTGCTCCAGCAGCGATCAAGAAACCTAGTCAAGTTGACCAAGGAGAAACTTATCAATCAGTT
AATCCAGTAATTGCTAGAGCACCTGAGACAGGGTCTACACAGAACAGAGTGCCCGAGAAAAGAAAGCAGGTAGAGCATGATAATGCTCTGGCAGAATACAGGCCAACACC
ACCATATCCTAAACGGTTGCAGAAGAAAGAGCAGAATGTTCAATTCAATAAGTTTTTAGATGTCTTGAAGCAACTGCACGTGAACATACCGTTGGTGGAAGCTCTAGAGC
AAATGCCAAATTATTCTTTAGACCTCACAAACCCGAAGCTTGAATTACTGAAGCCATCTATTAAAGAGCCGCCGGTGTTGGAGCTTAAAGCCTTGCCGCAACATCTGTTA
AATGGATTACTTTCAAAAAGGGCCGGCAGTGATGACTACGTGATGTCGCTGACACGAAAGGACAAGGGAGGTGAGAACATTAGGGCGTGGCAGGCATGCAGAAAGGTATT
TATAGCAAATTTCGACTTCCATGGAGAAAGAATCAAACACAAGGCGAATAGAAAGAGAGCGATGAAACTGGAACTTTCAGGGATTTATGGGTCGAGCGGTGACTTCATGG
AGGTCACTGAAACCATTCTGTCGGAGGCCTCTGATGAGCAGAGCCCCGCCCAGCAAAGCCCCACCAGCTCGGAGCACACTCTGGCTGACTCTGAGCTTCCGCCGCCGCCT
CTTCCTGTCGCCAGCCCTTGGGTAAACGCCCCTGACCCTACTGCCTCCTCCTCTCAGACCTAG
Protein sequenceShow/hide protein sequence
MAAPGLHVNRDLLGAIEHLTVALGRRSEPLARGQVSSGSRPRSSEESFGQPLEESPPLASSSGRSASVWSSPAESFSNSGQIDKMFFLSQYTIWGTRKIVETIHIRTLTI
LTRGITPILVGMTIKEDTMLEHPMLQHFSKSQAASLRHLESRVGQLAMDLKSRSVGALPSDTEVPKRDGKEQCKTLTLRSGKALPPAHPIAPAAIKKPSQVDQGETYQSV
NPVIARAPETGSTQNRVPEKRKQVEHDNALAEYRPTPPYPKRLQKKEQNVQFNKFLDVLKQLHVNIPLVEALEQMPNYSLDLTNPKLELLKPSIKEPPVLELKALPQHLL
NGLLSKRAGSDDYVMSLTRKDKGGENIRAWQACRKVFIANFDFHGERIKHKANRKRAMKLELSGIYGSSGDFMEVTETILSEASDEQSPAQQSPTSSEHTLADSELPPPP
LPVASPWVNAPDPTASSSQT