; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc02g16940 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc02g16940
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr2:12715359..12716012
RNA-Seq ExpressionMoc02g16940
SyntenyMoc02g16940
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022151609.1 uncharacterized protein LOC111019523 [Momordica charantia]3.7e-4358.82Show/hide
Query:  MAHPLPPKMKKLDMKSYDGSADPIDHIELYEGLIQLKAANDEMKCRAFS------------------------------------HDKKKPNTHMLTVRQ
        MA+PLPPKMKK DMK YD  A+PIDHIELYEGL++L A  D+MKCRAFS                                    HD+KK +TH+LT+ Q
Subjt:  MAHPLPPKMKKLDMKSYDGSADPIDHIELYEGLIQLKAANDEMKCRAFS------------------------------------HDKKKPNTHMLTVRQ

Query:  EEGESLHEFVECFMAEKIKVSDCSDDVARLTFMSTINNLDLAQSYAMQSTRTYNEAIQRARKYMHAEDVL
        EEGESLHEFV  F+ EKIKV DCS+DVAR+TFMS IN  +L QSYA+Q  RTY EAIQRARKYMHAEDVL
Subjt:  EEGESLHEFVECFMAEKIKVSDCSDDVARLTFMSTINNLDLAQSYAMQSTRTYNEAIQRARKYMHAEDVL

XP_022156542.1 uncharacterized protein LOC111023421 [Momordica charantia]2.1e-2231.58Show/hide
Query:  EIISKLQSNVEPLPQSCNLDDVTLVKLGEREDPPFTAPIMAHPLPPKMKKLDMKSYDGSADPIDHIELYEGLIQLKAANDEMKCRAFS------------
        ++  +L + VE L   C   D +L   G+  + PFT+ ++  P+PPK K   +K YDG+ DP D++E++EGL+  +AA+D +KCRAF             
Subjt:  EIISKLQSNVEPLPQSCNLDDVTLVKLGEREDPPFTAPIMAHPLPPKMKKLDMKSYDGSADPIDHIELYEGLIQLKAANDEMKCRAFS------------

Query:  ------------------------HDKKKPNTHMLTVRQEEGESLHEFVECFMAEKIKVSDCSDDVARLTFMSTINNLDLAQSYAMQSTRTYNEAIQRAR
                                H  KK  TH+ T+RQ+EGE+L E+V  F  E++KV+ CSDD A   F++ + +  L      ++  T+ E +Q+A+
Subjt:  ------------------------HDKKKPNTHMLTVRQEEGESLHEFVECFMAEKIKVSDCSDDVARLTFMSTINNLDLAQSYAMQSTRTYNEAIQRAR

Query:  KYMHAEDVL
        K +  +++L
Subjt:  KYMHAEDVL

XP_022158652.1 uncharacterized protein LOC111025109 [Momordica charantia]2.3e-2134.66Show/hide
Query:  EIISKLQSNVEPLPQSCNLDDVTLVKLGEREDPPFTAPIMAHPLPPKMKKLDMKSYDGSADPIDHIELYEGLIQLKAANDEMKCRAFS---HDKKKPNTH
        ++  +L + VE L   C   D +L   G+  +PPFT+ ++  P+PPK K   +K YDG+ DP D++E++EGL+  +AA+D +KCRAF        +    
Subjt:  EIISKLQSNVEPLPQSCNLDDVTLVKLGEREDPPFTAPIMAHPLPPKMKKLDMKSYDGSADPIDHIELYEGLIQLKAANDEMKCRAFS---HDKKKPNTH

Query:  MLTVRQEEGESLHEFVECFMAEKIKVSDCSDDVARLTFMSTINNLDLAQSYAMQSTRTYNEAIQRARKYMHAEDVL
         L  RQ+E E+L E+V  F  E++KV+ CSDD A   F + + +  L      ++  T+ E +Q+A+K +  +++L
Subjt:  MLTVRQEEGESLHEFVECFMAEKIKVSDCSDDVARLTFMSTINNLDLAQSYAMQSTRTYNEAIQRARKYMHAEDVL

XP_022159160.1 uncharacterized protein LOC111025585 [Momordica charantia]5.5e-2336.63Show/hide
Query:  KLQSNVEPLPQSCNLDDVTLVKLGEREDPPFTAPIMAHPLPPKMKKLDMKSYDGSADPIDHIELYEGLIQLKAANDEMKCRAFS-----------HDKKK
        +    VE L   C  ++ +    GE  + PFT+ ++  P+PPK K   MK YDGS DP D++E++E L+  +AA+D +KCRAF               +K
Subjt:  KLQSNVEPLPQSCNLDDVTLVKLGEREDPPFTAPIMAHPLPPKMKKLDMKSYDGSADPIDHIELYEGLIQLKAANDEMKCRAFS-----------HDKKK

Query:  PNTHMLTVRQEEGESLHEFVECFMAEKIKVSDCSDDVARLTFMSTINNLDLAQSYAMQSTRTYNEAIQRARK
          TH+ T+RQ+EGE+L E+V  F  E++KV+ CSDD A   F++T+ +  L      ++  T+ E +Q+A+K
Subjt:  PNTHMLTVRQEEGESLHEFVECFMAEKIKVSDCSDDVARLTFMSTINNLDLAQSYAMQSTRTYNEAIQRARK

XP_022159250.1 uncharacterized protein LOC111025663 [Momordica charantia]2.1e-2232.2Show/hide
Query:  KLQSNVEPLPQSCNLDDVTLVKLGEREDPPFTAPIMAHPLPPKMKKLDMKSYDGSADPIDHIELYEGLIQLKAANDEMKCRAFS----------------
        K    VE L   C   + +    G+  + PFT+ I+  P+PPK K   MK YDGS DP D++E++EGL+  +AA D +KCRAF                 
Subjt:  KLQSNVEPLPQSCNLDDVTLVKLGEREDPPFTAPIMAHPLPPKMKKLDMKSYDGSADPIDHIELYEGLIQLKAANDEMKCRAFS----------------

Query:  --------------------HDKKKPNTHMLTVRQEEGESLHEFVECFMAEKIKVSDCSDDVARLTFMSTINNLDLAQSYAMQSTRTYNEAIQRARKYMH
                            H  +K  TH+ T+RQ+EGE+L E+V  F+ E++KV+ CSDD A   F++ + + +L      ++  T+ E +Q+A+K + 
Subjt:  --------------------HDKKKPNTHMLTVRQEEGESLHEFVECFMAEKIKVSDCSDDVARLTFMSTINNLDLAQSYAMQSTRTYNEAIQRARKYMH

Query:  AEDVL
         +++L
Subjt:  AEDVL

TrEMBL top hitse value%identityAlignment
A0A6J1DDJ7 uncharacterized protein LOC1110195231.8e-4358.82Show/hide
Query:  MAHPLPPKMKKLDMKSYDGSADPIDHIELYEGLIQLKAANDEMKCRAFS------------------------------------HDKKKPNTHMLTVRQ
        MA+PLPPKMKK DMK YD  A+PIDHIELYEGL++L A  D+MKCRAFS                                    HD+KK +TH+LT+ Q
Subjt:  MAHPLPPKMKKLDMKSYDGSADPIDHIELYEGLIQLKAANDEMKCRAFS------------------------------------HDKKKPNTHMLTVRQ

Query:  EEGESLHEFVECFMAEKIKVSDCSDDVARLTFMSTINNLDLAQSYAMQSTRTYNEAIQRARKYMHAEDVL
        EEGESLHEFV  F+ EKIKV DCS+DVAR+TFMS IN  +L QSYA+Q  RTY EAIQRARKYMHAEDVL
Subjt:  EEGESLHEFVECFMAEKIKVSDCSDDVARLTFMSTINNLDLAQSYAMQSTRTYNEAIQRARKYMHAEDVL

A0A6J1DS95 uncharacterized protein LOC1110234211.0e-2231.58Show/hide
Query:  EIISKLQSNVEPLPQSCNLDDVTLVKLGEREDPPFTAPIMAHPLPPKMKKLDMKSYDGSADPIDHIELYEGLIQLKAANDEMKCRAFS------------
        ++  +L + VE L   C   D +L   G+  + PFT+ ++  P+PPK K   +K YDG+ DP D++E++EGL+  +AA+D +KCRAF             
Subjt:  EIISKLQSNVEPLPQSCNLDDVTLVKLGEREDPPFTAPIMAHPLPPKMKKLDMKSYDGSADPIDHIELYEGLIQLKAANDEMKCRAFS------------

Query:  ------------------------HDKKKPNTHMLTVRQEEGESLHEFVECFMAEKIKVSDCSDDVARLTFMSTINNLDLAQSYAMQSTRTYNEAIQRAR
                                H  KK  TH+ T+RQ+EGE+L E+V  F  E++KV+ CSDD A   F++ + +  L      ++  T+ E +Q+A+
Subjt:  ------------------------HDKKKPNTHMLTVRQEEGESLHEFVECFMAEKIKVSDCSDDVARLTFMSTINNLDLAQSYAMQSTRTYNEAIQRAR

Query:  KYMHAEDVL
        K +  +++L
Subjt:  KYMHAEDVL

A0A6J1DXR9 uncharacterized protein LOC1110251091.1e-2134.66Show/hide
Query:  EIISKLQSNVEPLPQSCNLDDVTLVKLGEREDPPFTAPIMAHPLPPKMKKLDMKSYDGSADPIDHIELYEGLIQLKAANDEMKCRAFS---HDKKKPNTH
        ++  +L + VE L   C   D +L   G+  +PPFT+ ++  P+PPK K   +K YDG+ DP D++E++EGL+  +AA+D +KCRAF        +    
Subjt:  EIISKLQSNVEPLPQSCNLDDVTLVKLGEREDPPFTAPIMAHPLPPKMKKLDMKSYDGSADPIDHIELYEGLIQLKAANDEMKCRAFS---HDKKKPNTH

Query:  MLTVRQEEGESLHEFVECFMAEKIKVSDCSDDVARLTFMSTINNLDLAQSYAMQSTRTYNEAIQRARKYMHAEDVL
         L  RQ+E E+L E+V  F  E++KV+ CSDD A   F + + +  L      ++  T+ E +Q+A+K +  +++L
Subjt:  MLTVRQEEGESLHEFVECFMAEKIKVSDCSDDVARLTFMSTINNLDLAQSYAMQSTRTYNEAIQRARKYMHAEDVL

A0A6J1DXW4 uncharacterized protein LOC1110255852.7e-2336.63Show/hide
Query:  KLQSNVEPLPQSCNLDDVTLVKLGEREDPPFTAPIMAHPLPPKMKKLDMKSYDGSADPIDHIELYEGLIQLKAANDEMKCRAFS-----------HDKKK
        +    VE L   C  ++ +    GE  + PFT+ ++  P+PPK K   MK YDGS DP D++E++E L+  +AA+D +KCRAF               +K
Subjt:  KLQSNVEPLPQSCNLDDVTLVKLGEREDPPFTAPIMAHPLPPKMKKLDMKSYDGSADPIDHIELYEGLIQLKAANDEMKCRAFS-----------HDKKK

Query:  PNTHMLTVRQEEGESLHEFVECFMAEKIKVSDCSDDVARLTFMSTINNLDLAQSYAMQSTRTYNEAIQRARK
          TH+ T+RQ+EGE+L E+V  F  E++KV+ CSDD A   F++T+ +  L      ++  T+ E +Q+A+K
Subjt:  PNTHMLTVRQEEGESLHEFVECFMAEKIKVSDCSDDVARLTFMSTINNLDLAQSYAMQSTRTYNEAIQRARK

A0A6J1DY58 uncharacterized protein LOC1110256631.0e-2232.2Show/hide
Query:  KLQSNVEPLPQSCNLDDVTLVKLGEREDPPFTAPIMAHPLPPKMKKLDMKSYDGSADPIDHIELYEGLIQLKAANDEMKCRAFS----------------
        K    VE L   C   + +    G+  + PFT+ I+  P+PPK K   MK YDGS DP D++E++EGL+  +AA D +KCRAF                 
Subjt:  KLQSNVEPLPQSCNLDDVTLVKLGEREDPPFTAPIMAHPLPPKMKKLDMKSYDGSADPIDHIELYEGLIQLKAANDEMKCRAFS----------------

Query:  --------------------HDKKKPNTHMLTVRQEEGESLHEFVECFMAEKIKVSDCSDDVARLTFMSTINNLDLAQSYAMQSTRTYNEAIQRARKYMH
                            H  +K  TH+ T+RQ+EGE+L E+V  F+ E++KV+ CSDD A   F++ + + +L      ++  T+ E +Q+A+K + 
Subjt:  --------------------HDKKKPNTHMLTVRQEEGESLHEFVECFMAEKIKVSDCSDDVARLTFMSTINNLDLAQSYAMQSTRTYNEAIQRARKYMH

Query:  AEDVL
         +++L
Subjt:  AEDVL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGAAATAATCAGTAAGCTACAAAGTAATGTTGAACCTTTACCACAAAGTTGCAATCTAGATGACGTGACCTTGGTTAAACTGGGTGAAAGAGAAGACCCACCTTT
CACAGCGCCAATAATGGCGCACCCTTTACCTCCAAAAATGAAAAAATTGGACATGAAGTCGTATGATGGATCAGCAGATCCAATTGATCATATTGAGTTGTATGAAGGGC
TTATACAGTTGAAAGCAGCCAATGATGAAATGAAGTGTCGGGCTTTCTCACATGACAAGAAAAAGCCAAATACACATATGTTGACCGTTCGCCAGGAAGAGGGTGAGTCG
TTACATGAGTTTGTCGAGTGCTTTATGGCAGAAAAAATAAAAGTGTCGGACTGTTCAGATGACGTAGCAAGGCTTACGTTCATGTCTACCATAAACAATCTGGACCTGGC
TCAATCCTATGCCATGCAGTCAACACGTACATACAATGAGGCCATACAGCGTGCCAGGAAATATATGCATGCTGAAGACGTGCTTTGTTGTGCCTCAGCTTACTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAAGAAATAATCAGTAAGCTACAAAGTAATGTTGAACCTTTACCACAAAGTTGCAATCTAGATGACGTGACCTTGGTTAAACTGGGTGAAAGAGAAGACCCACCTTT
CACAGCGCCAATAATGGCGCACCCTTTACCTCCAAAAATGAAAAAATTGGACATGAAGTCGTATGATGGATCAGCAGATCCAATTGATCATATTGAGTTGTATGAAGGGC
TTATACAGTTGAAAGCAGCCAATGATGAAATGAAGTGTCGGGCTTTCTCACATGACAAGAAAAAGCCAAATACACATATGTTGACCGTTCGCCAGGAAGAGGGTGAGTCG
TTACATGAGTTTGTCGAGTGCTTTATGGCAGAAAAAATAAAAGTGTCGGACTGTTCAGATGACGTAGCAAGGCTTACGTTCATGTCTACCATAAACAATCTGGACCTGGC
TCAATCCTATGCCATGCAGTCAACACGTACATACAATGAGGCCATACAGCGTGCCAGGAAATATATGCATGCTGAAGACGTGCTTTGTTGTGCCTCAGCTTACTAG
Protein sequenceShow/hide protein sequence
MKEIISKLQSNVEPLPQSCNLDDVTLVKLGEREDPPFTAPIMAHPLPPKMKKLDMKSYDGSADPIDHIELYEGLIQLKAANDEMKCRAFSHDKKKPNTHMLTVRQEEGES
LHEFVECFMAEKIKVSDCSDDVARLTFMSTINNLDLAQSYAMQSTRTYNEAIQRARKYMHAEDVLCCASAY