| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0032016.1 retrovirus-related pol polyprotein from transposon tnt 1-94 [Cucumis melo var. makuwa] | 7.3e-50 | 38.15 | Show/hide |
Query: ISDVLAKKHEDRVTAKEIMDSLQSMFGQSSSQARHEALKLIYNSRMKKGFSVREHVLNLMVQLQRGRVEQGCHRRA------------------------
+SDVLAKKHE + AKEIMDSL+ MFGQ RHEA+K IY RMK+G SVREHVL++M+ V G A
Subjt: ISDVLAKKHEDRVTAKEIMDSLQSMFGQSSSQARHEALKLIYNSRMKKGFSVREHVLNLMVQLQRGRVEQGCHRRA------------------------
Query: KSEYTPTTLLNELQTYQSPMKSKGQEGEANVATSMW-FNRGSSSGTKSAPSSSGSNTFKKKAVCYHKHDPETQEDSEEDVVVVFVGNRRRKQRKSAFATG
K E+ T LLNELQ +Q+ K KG+E EANV T+ F RGSSS +KS PS KK
Subjt: KSEYTPTTLLNELQTYQSPMKSKGQEGEANVATSMW-FNRGSSSGTKSAPSSSGSNTFKKKAVCYHKHDPETQEDSEEDVVVVFVGNRRRKQRKSAFATG
Query: FTSLQPAGKGSKPDSAAATAKKGKAKVAEKGKCFHCNVDGHWKRNCPKYLAEKK----------------------------------------------
GKG P KGK K EKGKC+HC +GH RNCPKYLA+KK
Subjt: FTSLQPAGKGSKPDSAAATAKKGKAKVAEKGKCFHCNVDGHWKRNCPKYLAEKK----------------------------------------------
Query: ----KANEASTSR---------------QSHPPQVLRVPRRSGRIVSQPDRYVGFTETQVVIPDDGVEDPLTYKKAMEDTDKDKWVKAMDLKMESMYFNS
+ ++ +T R Q+HP Q L PRRSGR+V QPDRY+G +E Q++IPDDG+EDPLTYK+AM D D D+W+KAMD +MESMY NS
Subjt: ----KANEASTSR---------------QSHPPQVLRVPRRSGRIVSQPDRYVGFTETQVVIPDDGVEDPLTYKKAMEDTDKDKWVKAMDLKMESMYFNS
Query: V
V
Subjt: V
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| KAA0037371.1 gag/pol protein [Cucumis melo var. makuwa] | 6.8e-48 | 50.2 | Show/hide |
Query: ANAKAKVYILASISDVLAKKHEDRVTAKEIMDSLQSMFGQSSSQARHEALKLIYNSRMKKGFSVREHVLNLMVQLQRGRVEQGCHRRAKS-EYTPTTLLN
AN KA+ YILAS+S+VLAKKHE +TA+EIMDSLQ MFGQ+S Q +H+ALK IYN+RM +G SVREHVLN+M+ +++ A YT TTLLN
Subjt: ANAKAKVYILASISDVLAKKHEDRVTAKEIMDSLQSMFGQSSSQARHEALKLIYNSRMKKGFSVREHVLNLMVQLQRGRVEQGCHRRAKS-EYTPTTLLN
Query: ELQTYQSPMKSKGQEGEANVATS-MWFNRGSSSGTKSAPSSSGSNTFKKKAVCYHKHDPETQEDSEEDVVVVFVGNRRRKQRKSAFATGFTSLQPAGKGS
ELQT++S MK KGQ+GEANVATS F+RGS+SG K PSSSG+ +KKK G+G+
Subjt: ELQTYQSPMKSKGQEGEANVATS-MWFNRGSSSGTKSAPSSSGSNTFKKKAVCYHKHDPETQEDSEEDVVVVFVGNRRRKQRKSAFATGFTSLQPAGKGS
Query: KPDSAAATAKKGKAKVAEKGKCFHCNVDGHWKRNCPKYLAEKKKANEASTSRQ
K + AAA K KAK A KG CFHCN +GHWKRNCPKYLAEKKKA + +++
Subjt: KPDSAAATAKKGKAKVAEKGKCFHCNVDGHWKRNCPKYLAEKKKANEASTSRQ
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| KAA0037371.1 gag/pol protein [Cucumis melo var. makuwa] | 1.6e-17 | 64.38 | Show/hide |
Query: QSHPPQVLRVPRRSGRIVSQPDRYVGFTETQVVIPDDGVEDPLTYKKAMEDTDKDKWVKAMDLKMESMYFNSV
++H PQ LR PRRSGR+ + P RY+ TET VI D +EDPLT+KKAMED DKD+W+KAM+L++ESMYFNSV
Subjt: QSHPPQVLRVPRRSGRIVSQPDRYVGFTETQVVIPDDGVEDPLTYKKAMEDTDKDKWVKAMDLKMESMYFNSV
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| KAA0050670.1 gag/pol protein [Cucumis melo var. makuwa] | 9.5e-50 | 32.41 | Show/hide |
Query: ANAKAKVYILASISDVLAKKHEDRVTAKEIMDSLQSMFGQSSSQARHEALKLIYNSRMKKGFSVREHVLNLMVQLQRGRVEQGCHRRA------------
AN KA+ YILAS S+VLAKKHE +T +EIMDSLQ MFGQ+S Q +H+AL IYN+RM +G SVREHVLN+MV + A
Subjt: ANAKAKVYILASISDVLAKKHEDRVTAKEIMDSLQSMFGQSSSQARHEALKLIYNSRMKKGFSVREHVLNLMVQLQRGRVEQGCHRRA------------
Query: ------------KSEYTPTTLLNELQTYQSPMKSKGQEGEANVATS-MWFNRGSSSGTKSAPSSSGSNTFKKKAVCYHKHDPETQEDSEEDVVVVFVGNR
K YT TTLLNELQT++S MK KGQ+GEANVATS F+RG + GTKS PSSSG+ +KKK
Subjt: ------------KSEYTPTTLLNELQTYQSPMKSKGQEGEANVATS-MWFNRGSSSGTKSAPSSSGSNTFKKKAVCYHKHDPETQEDSEEDVVVVFVGNR
Query: RRKQRKSAFATGFTSLQPAGKGSKPDSAAA-TAKKGKAKVAEKGKCFHCNVDGHWKRNCPKYLAEKKKANE-----------------------------
G+G+K + AA T KK K A KG CFHCN +GHWKRNCPKYLAEKKKA +
Subjt: RRKQRKSAFATGFTSLQPAGKGSKPDSAAA-TAKKGKAKVAEKGKCFHCNVDGHWKRNCPKYLAEKKKANE-----------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: --------------------------------------------------------------ASTSRQSHPPQVLRVPRRSGRIVSQPDRYVGFTETQVV
A +S ++H PQ LR PRRSGR+ + P RY+ TET V
Subjt: --------------------------------------------------------------ASTSRQSHPPQVLRVPRRSGRIVSQPDRYVGFTETQVV
Query: IPDDGVEDPLTYKKAMEDTDKDKWVKAMDLKMESMYFNSV
I D +EDPLT+KKAMED DKD+W+KAM+L++ESMYFNSV
Subjt: IPDDGVEDPLTYKKAMEDTDKDKWVKAMDLKMESMYFNSV
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| KAA0061339.1 gag/pol protein [Cucumis melo var. makuwa] | 9.5e-50 | 39.86 | Show/hide |
Query: ANAKAKVYILASISDVLAKKHEDRVTAKEIMDSLQSMFGQSSSQARHEALKLIYNSRMKKGFSVREHVLNLMVQLQRGRVEQGCHRRA------------
AN KA+ YILAS+S+VLAKKHE +TA+EIMDSLQ MFGQ+S Q +H+ALK IYN+RM +G SVREHVLN+MV + A
Subjt: ANAKAKVYILASISDVLAKKHEDRVTAKEIMDSLQSMFGQSSSQARHEALKLIYNSRMKKGFSVREHVLNLMVQLQRGRVEQGCHRRA------------
Query: ------------KSEYTPTTLLNELQTYQSPMKSKGQEGEANVATS-MWFNRGSSSGTKSAPSSSGSNTFKKK---------------------AVCYHK
K YT TTLLNELQT++S MK KGQ+GEANVATS F+RGS+SGTKS PSSSG+ +KKK A
Subjt: ------------KSEYTPTTLLNELQTYQSPMKSKGQEGEANVATS-MWFNRGSSSGTKSAPSSSGSNTFKKK---------------------AVCYHK
Query: HDPETQEDSEE------DVVVVFVGNRRRKQRKSAFATG----FTSLQPAGKGSKPDSAAATAKKGKAKVAEKGKCFHCNVDG--------------HWK
P+ SE D+V + +A + P+ S+ KG K +G F+ D H +
Subjt: HDPETQEDSEE------DVVVVFVGNRRRKQRKSAFATG----FTSLQPAGKGSKPDSAAATAKKGKAKVAEKGKCFHCNVDG--------------HWK
Query: RNCPK---YLAE-KKKANEAST-----------------SRQSHPPQVLRVPRRSGRIVSQPDRYVGFTETQVVIPDDGVEDPLTYKKAMEDTDKDKWVK
+ P+ L E K+ + ST S ++H PQ LR PR+SGR+ + P RY+ TET VI D +EDPLT+KKAMED DKD+W+K
Subjt: RNCPK---YLAE-KKKANEAST-----------------SRQSHPPQVLRVPRRSGRIVSQPDRYVGFTETQVVIPDDGVEDPLTYKKAMEDTDKDKWVK
Query: AMDLKMESMYFNSV
AM+L++ESMYFNSV
Subjt: AMDLKMESMYFNSV
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| KAA0066490.1 gag/pol protein [Cucumis melo var. makuwa] | 2.1e-49 | 31.46 | Show/hide |
Query: ANAKAKVYILASISDVLAKKHEDRVTAKEIMDSLQSMFGQSSSQARHEALKLIYNSRMKKGFSVREHVLNLMVQLQRGRVEQGCHRRA------------
AN KA+ YILAS+S+VLAKKHE +TA+EIMDSLQ MFGQ+S Q +H+ALK IYN+RM +G SVREHVLN+MV + A
Subjt: ANAKAKVYILASISDVLAKKHEDRVTAKEIMDSLQSMFGQSSSQARHEALKLIYNSRMKKGFSVREHVLNLMVQLQRGRVEQGCHRRA------------
Query: ------------KSEYTPTTLLNELQTYQSPMKSKGQEGEANVATS-MWFNRGSSSGTKSAPSSSGSNTFKKKAVCYHKHDPETQEDSEEDVVVVFVGNR
K YT TTLLNELQT++S MK KGQ+GEANVATS F+RGS+SGTKS PSSSG+ +KKK
Subjt: ------------KSEYTPTTLLNELQTYQSPMKSKGQEGEANVATS-MWFNRGSSSGTKSAPSSSGSNTFKKKAVCYHKHDPETQEDSEEDVVVVFVGNR
Query: RRKQRKSAFATGFTSLQPAGKGSKPDSAAA-TAKKGKAKVAEKGKCFHCNVDGHWKRNCPKYLAEKKKANEA----------------------------
G+G+K + AAA T KK K A KG CFHCN +GHWKRNCPKYLAEKKKA +A
Subjt: RRKQRKSAFATGFTSLQPAGKGSKPDSAAA-TAKKGKAKVAEKGKCFHCNVDGHWKRNCPKYLAEKKKANEA----------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: --------------------------------------------------------------------------------------------STSRQSHP
+S ++H
Subjt: --------------------------------------------------------------------------------------------STSRQSHP
Query: PQVLRVPRRSGRIVSQPDRYVGFTETQVVIPDDGVEDPLTYKKAMEDTDKDKWVKAMDLKMESMYFNSV
PQ LR PRRSGR+ + P RY+ TET VI D +EDPLT+KKAMED DKD+W+KAM+L+++SMYFNSV
Subjt: PQVLRVPRRSGRIVSQPDRYVGFTETQVVIPDDGVEDPLTYKKAMEDTDKDKWVKAMDLKMESMYFNSV
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7T706 Gag/pol protein | 3.3e-48 | 50.2 | Show/hide |
Query: ANAKAKVYILASISDVLAKKHEDRVTAKEIMDSLQSMFGQSSSQARHEALKLIYNSRMKKGFSVREHVLNLMVQLQRGRVEQGCHRRAKS-EYTPTTLLN
AN KA+ YILAS+S+VLAKKHE +TA+EIMDSLQ MFGQ+S Q +H+ALK IYN+RM +G SVREHVLN+M+ +++ A YT TTLLN
Subjt: ANAKAKVYILASISDVLAKKHEDRVTAKEIMDSLQSMFGQSSSQARHEALKLIYNSRMKKGFSVREHVLNLMVQLQRGRVEQGCHRRAKS-EYTPTTLLN
Query: ELQTYQSPMKSKGQEGEANVATS-MWFNRGSSSGTKSAPSSSGSNTFKKKAVCYHKHDPETQEDSEEDVVVVFVGNRRRKQRKSAFATGFTSLQPAGKGS
ELQT++S MK KGQ+GEANVATS F+RGS+SG K PSSSG+ +KKK G+G+
Subjt: ELQTYQSPMKSKGQEGEANVATS-MWFNRGSSSGTKSAPSSSGSNTFKKKAVCYHKHDPETQEDSEEDVVVVFVGNRRRKQRKSAFATGFTSLQPAGKGS
Query: KPDSAAATAKKGKAKVAEKGKCFHCNVDGHWKRNCPKYLAEKKKANEASTSRQ
K + AAA K KAK A KG CFHCN +GHWKRNCPKYLAEKKKA + +++
Subjt: KPDSAAATAKKGKAKVAEKGKCFHCNVDGHWKRNCPKYLAEKKKANEASTSRQ
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| A0A5A7T706 Gag/pol protein | 7.9e-18 | 64.38 | Show/hide |
Query: QSHPPQVLRVPRRSGRIVSQPDRYVGFTETQVVIPDDGVEDPLTYKKAMEDTDKDKWVKAMDLKMESMYFNSV
++H PQ LR PRRSGR+ + P RY+ TET VI D +EDPLT+KKAMED DKD+W+KAM+L++ESMYFNSV
Subjt: QSHPPQVLRVPRRSGRIVSQPDRYVGFTETQVVIPDDGVEDPLTYKKAMEDTDKDKWVKAMDLKMESMYFNSV
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| A0A5A7U676 Gag/pol protein | 4.6e-50 | 32.41 | Show/hide |
Query: ANAKAKVYILASISDVLAKKHEDRVTAKEIMDSLQSMFGQSSSQARHEALKLIYNSRMKKGFSVREHVLNLMVQLQRGRVEQGCHRRA------------
AN KA+ YILAS S+VLAKKHE +T +EIMDSLQ MFGQ+S Q +H+AL IYN+RM +G SVREHVLN+MV + A
Subjt: ANAKAKVYILASISDVLAKKHEDRVTAKEIMDSLQSMFGQSSSQARHEALKLIYNSRMKKGFSVREHVLNLMVQLQRGRVEQGCHRRA------------
Query: ------------KSEYTPTTLLNELQTYQSPMKSKGQEGEANVATS-MWFNRGSSSGTKSAPSSSGSNTFKKKAVCYHKHDPETQEDSEEDVVVVFVGNR
K YT TTLLNELQT++S MK KGQ+GEANVATS F+RG + GTKS PSSSG+ +KKK
Subjt: ------------KSEYTPTTLLNELQTYQSPMKSKGQEGEANVATS-MWFNRGSSSGTKSAPSSSGSNTFKKKAVCYHKHDPETQEDSEEDVVVVFVGNR
Query: RRKQRKSAFATGFTSLQPAGKGSKPDSAAA-TAKKGKAKVAEKGKCFHCNVDGHWKRNCPKYLAEKKKANE-----------------------------
G+G+K + AA T KK K A KG CFHCN +GHWKRNCPKYLAEKKKA +
Subjt: RRKQRKSAFATGFTSLQPAGKGSKPDSAAA-TAKKGKAKVAEKGKCFHCNVDGHWKRNCPKYLAEKKKANE-----------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: --------------------------------------------------------------ASTSRQSHPPQVLRVPRRSGRIVSQPDRYVGFTETQVV
A +S ++H PQ LR PRRSGR+ + P RY+ TET V
Subjt: --------------------------------------------------------------ASTSRQSHPPQVLRVPRRSGRIVSQPDRYVGFTETQVV
Query: IPDDGVEDPLTYKKAMEDTDKDKWVKAMDLKMESMYFNSV
I D +EDPLT+KKAMED DKD+W+KAM+L++ESMYFNSV
Subjt: IPDDGVEDPLTYKKAMEDTDKDKWVKAMDLKMESMYFNSV
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| A0A5A7V6N0 Gag/pol protein | 4.6e-50 | 39.86 | Show/hide |
Query: ANAKAKVYILASISDVLAKKHEDRVTAKEIMDSLQSMFGQSSSQARHEALKLIYNSRMKKGFSVREHVLNLMVQLQRGRVEQGCHRRA------------
AN KA+ YILAS+S+VLAKKHE +TA+EIMDSLQ MFGQ+S Q +H+ALK IYN+RM +G SVREHVLN+MV + A
Subjt: ANAKAKVYILASISDVLAKKHEDRVTAKEIMDSLQSMFGQSSSQARHEALKLIYNSRMKKGFSVREHVLNLMVQLQRGRVEQGCHRRA------------
Query: ------------KSEYTPTTLLNELQTYQSPMKSKGQEGEANVATS-MWFNRGSSSGTKSAPSSSGSNTFKKK---------------------AVCYHK
K YT TTLLNELQT++S MK KGQ+GEANVATS F+RGS+SGTKS PSSSG+ +KKK A
Subjt: ------------KSEYTPTTLLNELQTYQSPMKSKGQEGEANVATS-MWFNRGSSSGTKSAPSSSGSNTFKKK---------------------AVCYHK
Query: HDPETQEDSEE------DVVVVFVGNRRRKQRKSAFATG----FTSLQPAGKGSKPDSAAATAKKGKAKVAEKGKCFHCNVDG--------------HWK
P+ SE D+V + +A + P+ S+ KG K +G F+ D H +
Subjt: HDPETQEDSEE------DVVVVFVGNRRRKQRKSAFATG----FTSLQPAGKGSKPDSAAATAKKGKAKVAEKGKCFHCNVDG--------------HWK
Query: RNCPK---YLAE-KKKANEAST-----------------SRQSHPPQVLRVPRRSGRIVSQPDRYVGFTETQVVIPDDGVEDPLTYKKAMEDTDKDKWVK
+ P+ L E K+ + ST S ++H PQ LR PR+SGR+ + P RY+ TET VI D +EDPLT+KKAMED DKD+W+K
Subjt: RNCPK---YLAE-KKKANEAST-----------------SRQSHPPQVLRVPRRSGRIVSQPDRYVGFTETQVVIPDDGVEDPLTYKKAMEDTDKDKWVK
Query: AMDLKMESMYFNSV
AM+L++ESMYFNSV
Subjt: AMDLKMESMYFNSV
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| A0A5A7VH46 Gag/pol protein | 1.0e-49 | 31.46 | Show/hide |
Query: ANAKAKVYILASISDVLAKKHEDRVTAKEIMDSLQSMFGQSSSQARHEALKLIYNSRMKKGFSVREHVLNLMVQLQRGRVEQGCHRRA------------
AN KA+ YILAS+S+VLAKKHE +TA+EIMDSLQ MFGQ+S Q +H+ALK IYN+RM +G SVREHVLN+MV + A
Subjt: ANAKAKVYILASISDVLAKKHEDRVTAKEIMDSLQSMFGQSSSQARHEALKLIYNSRMKKGFSVREHVLNLMVQLQRGRVEQGCHRRA------------
Query: ------------KSEYTPTTLLNELQTYQSPMKSKGQEGEANVATS-MWFNRGSSSGTKSAPSSSGSNTFKKKAVCYHKHDPETQEDSEEDVVVVFVGNR
K YT TTLLNELQT++S MK KGQ+GEANVATS F+RGS+SGTKS PSSSG+ +KKK
Subjt: ------------KSEYTPTTLLNELQTYQSPMKSKGQEGEANVATS-MWFNRGSSSGTKSAPSSSGSNTFKKKAVCYHKHDPETQEDSEEDVVVVFVGNR
Query: RRKQRKSAFATGFTSLQPAGKGSKPDSAAA-TAKKGKAKVAEKGKCFHCNVDGHWKRNCPKYLAEKKKANEA----------------------------
G+G+K + AAA T KK K A KG CFHCN +GHWKRNCPKYLAEKKKA +A
Subjt: RRKQRKSAFATGFTSLQPAGKGSKPDSAAA-TAKKGKAKVAEKGKCFHCNVDGHWKRNCPKYLAEKKKANEA----------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: --------------------------------------------------------------------------------------------STSRQSHP
+S ++H
Subjt: --------------------------------------------------------------------------------------------STSRQSHP
Query: PQVLRVPRRSGRIVSQPDRYVGFTETQVVIPDDGVEDPLTYKKAMEDTDKDKWVKAMDLKMESMYFNSV
PQ LR PRRSGR+ + P RY+ TET VI D +EDPLT+KKAMED DKD+W+KAM+L+++SMYFNSV
Subjt: PQVLRVPRRSGRIVSQPDRYVGFTETQVVIPDDGVEDPLTYKKAMEDTDKDKWVKAMDLKMESMYFNSV
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| A0A5D3CYG9 Retrovirus-related pol polyprotein from transposon tnt 1-94 | 3.5e-50 | 38.15 | Show/hide |
Query: ISDVLAKKHEDRVTAKEIMDSLQSMFGQSSSQARHEALKLIYNSRMKKGFSVREHVLNLMVQLQRGRVEQGCHRRA------------------------
+SDVLAKKHE + AKEIMDSL+ MFGQ RHEA+K IY RMK+G SVREHVL++M+ V G A
Subjt: ISDVLAKKHEDRVTAKEIMDSLQSMFGQSSSQARHEALKLIYNSRMKKGFSVREHVLNLMVQLQRGRVEQGCHRRA------------------------
Query: KSEYTPTTLLNELQTYQSPMKSKGQEGEANVATSMW-FNRGSSSGTKSAPSSSGSNTFKKKAVCYHKHDPETQEDSEEDVVVVFVGNRRRKQRKSAFATG
K E+ T LLNELQ +Q+ K KG+E EANV T+ F RGSSS +KS PS KK
Subjt: KSEYTPTTLLNELQTYQSPMKSKGQEGEANVATSMW-FNRGSSSGTKSAPSSSGSNTFKKKAVCYHKHDPETQEDSEEDVVVVFVGNRRRKQRKSAFATG
Query: FTSLQPAGKGSKPDSAAATAKKGKAKVAEKGKCFHCNVDGHWKRNCPKYLAEKK----------------------------------------------
GKG P KGK K EKGKC+HC +GH RNCPKYLA+KK
Subjt: FTSLQPAGKGSKPDSAAATAKKGKAKVAEKGKCFHCNVDGHWKRNCPKYLAEKK----------------------------------------------
Query: ----KANEASTSR---------------QSHPPQVLRVPRRSGRIVSQPDRYVGFTETQVVIPDDGVEDPLTYKKAMEDTDKDKWVKAMDLKMESMYFNS
+ ++ +T R Q+HP Q L PRRSGR+V QPDRY+G +E Q++IPDDG+EDPLTYK+AM D D D+W+KAMD +MESMY NS
Subjt: ----KANEASTSR---------------QSHPPQVLRVPRRSGRIVSQPDRYVGFTETQVVIPDDGVEDPLTYKKAMEDTDKDKWVKAMDLKMESMYFNS
Query: V
V
Subjt: V
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