CuGenDBv2

Gene ID	Moc02g17150
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Gag/pol protein
Genome location	chr2:12882986..12884376
RNA-Seq Expression	Moc02g17150
Synteny	Moc02g17150
Gene Ontology terms	GO:0015074 - DNA integration (biological process) GO:0003676 - nucleic acid binding (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR001878 - Zinc finger, CCHC-type IPR036875 - Zinc finger, CCHC-type superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

ADJ18449.1 gag/pol protein, partial [Bryonia dioica]

2.3e-128

73.78

Show/hide

Query:  MNSSIVQLLASGKLNGDNYSTWKNNLNTILVVDDLRFVLTEECPQTPAANANRNVREAFDRWVKANDKARVYILASMTDVLAKKHEPLMTAKEILDSLKA
        MN+SIVQLLAS KLNGDNYS WK+NLNTILVVDDLRFVLTEECPQ PA NANR VREA+DRWVKANDKARVYILASMTDVLAKKH+ + TAK I+DSL+ 
Subjt:  MNSSIVQLLASGKLNGDNYSTWKNNLNTILVVDDLRFVLTEECPQTPAANANRNVREAFDRWVKANDKARVYILASMTDVLAKKHEPLMTAKEILDSLKA

Query:  MFRQPSSTLRHEALKYVYNKHMKEGTSVREHVLDMMVHFNTAEVNGATIDEASQ----------------------------TTLLNELQRFQNLTKAKG
        MF QPS +LRHEA+K++Y K MKEGTSVREHVLDMM+HFN AEVNG  IDEA+Q                            TTLLNELQRFQNLT +KG
Subjt:  MFRQPSSTLRHEALKYVYNKHMKEGTSVREHVLDMMVHFNTAEVNGATIDEASQ----------------------------TTLLNELQRFQNLTKAKG

Query:  KEVEANVA-TRKKIPRGSTSKAKAGPSKNRNVQMKKKKEKGKAPVVDK-GKNVTKGICFHCNQDGHRKRNCPKYLAEKKAEKATTGKYDLLVVETCLVEY
        KEVEANVA T++K  RGS+SK K GPSK    QM KKK KGKAP   K  KN  KG CFHCNQDGH KRNCPKYLAEKKAEKAT GKYDLLVVETCLVE 
Subjt:  KEVEANVA-TRKKIPRGSTSKAKAGPSKNRNVQMKKKKEKGKAPVVDK-GKNVTKGICFHCNQDGHRKRNCPKYLAEKKAEKATTGKYDLLVVETCLVEY

Query:  DTSTWVLDSEATNHICFSFQETSSWKKLEEGEIILKVGTGNVVSAKA
        D STW+LDS ATNHICFSFQETSSWKKL+EGEI LKVGTG VVSA+A
Subjt:  DTSTWVLDSEATNHICFSFQETSSWKKLEEGEIILKVGTGNVVSAKA

KAA0035879.1 gag/pol protein [Cucumis melo var. makuwa]

3.6e-102

58.24

Show/hide

Query:  MNSSIVQLLASGKLNGDNYSTWKNNLNTILVVDDLRFVLTEECPQTPAANANRNVREAFDRWVKANDKARVYILASMTDVLAKKHEPLMTAKEILDSLKA
        M S+ + +LA+ KLNG+NY++WKN +NT+L++DDLRFVL EECPQ PAANA R VRE ++RW KAN+KAR YILAS+++VLAKKHE ++TA+EI+DSL+ 
Subjt:  MNSSIVQLLASGKLNGDNYSTWKNNLNTILVVDDLRFVLTEECPQTPAANANRNVREAFDRWVKANDKARVYILASMTDVLAKKHEPLMTAKEILDSLKA

Query:  MFRQPSSTLRHEALKYVYNKHMKEGTSVREHVLDMMVHFNTAEVNGATIDEASQ----------------------------TTLLNELQRFQNLTKAKG
        MF Q S  ++H+ALKY+YN  M EG SVREHVL+MMVHFN AE+NGA IDEASQ                            TTLLNELQ F++L K KG
Subjt:  MFRQPSSTLRHEALKYVYNKHMKEGTSVREHVLDMMVHFNTAEVNGATIDEASQ----------------------------TTLLNELQRFQNLTKAKG

Query:  KEVEANVAT-RKKIPRGSTSKAKAGPSKNRNVQMKKKK--EKGKAPV----VDKGKNVTKGICFHCNQDGHRKRNCPKYLAEKKAEKATTGKYDLLVVET
        ++ EANVAT  +K  RGSTS  K+ PS + N + KKKK  +  KA +      K     KGICFHCNQ+GH KRNCPKYLAEKK  KA  GKYDLLV+ET
Subjt:  KEVEANVAT-RKKIPRGSTSKAKAGPSKNRNVQMKKKK--EKGKAPV----VDKGKNVTKGICFHCNQDGHRKRNCPKYLAEKKAEKATTGKYDLLVVET

Query:  CLVEYDTSTWVLDSEATNHICFSFQETSSWKKLEEGEIILKVGTGNVVSAKA
        CLVE D S W++DS ATNH+C SFQ  SSW++LE GE+ ++VGTG+VVSA A
Subjt:  CLVEYDTSTWVLDSEATNHICFSFQETSSWKKLEEGEIILKVGTGNVVSAKA

KAA0048103.1 gag/pol protein [Cucumis melo var. makuwa]

4.0e-117

66.86

Show/hide

Query:  MNSSIVQLLASGKLNGDNYSTWKNNLNTILVVDDLRFVLTEECPQTPAANANRNVREAFDRWVKANDKARVYILASMTDVLAKKHEPLMTAKEILDSLKA
        MNS IVQLLAS KLN DNY+TWK+NLNTILVVDDLRFVLTEECPQTPA+NANR  REA+DRW+KAN+KARVYILASM+DVLAKKHE L TAKEI+DSLK 
Subjt:  MNSSIVQLLASGKLNGDNYSTWKNNLNTILVVDDLRFVLTEECPQTPAANANRNVREAFDRWVKANDKARVYILASMTDVLAKKHEPLMTAKEILDSLKA

Query:  MFRQPSSTLRHEALKYVYNKHMKEGTSVREHVLDMMVHFNTAEVNGATIDEASQ----------------------------TTLLNELQRFQNLTKAKG
        MF QP  +LRH+A+KY+Y K MKEGTS+REHVL MM+HFN AEVNG  IDEA+Q                            TTLLNELQRFQNLT  K 
Subjt:  MFRQPSSTLRHEALKYVYNKHMKEGTSVREHVLDMMVHFNTAEVNGATIDEASQ----------------------------TTLLNELQRFQNLTKAKG

Query:  KEVEANVATRK-KIPRGSTSKAKAGPSK-NRNVQMKKKKEKGKAPVVDKGKNVT-KGICFHCNQDGHRKRNCPKYLAEKKAEKATTGKYDLLVVETCLVE
        KE+EAN+AT K K  RGS+SK+K GPSK NR ++   KK KGK P  +KGK    KG C+HC ++GH   NCPKYL +KKAEK    KYDLLV+ETCLVE
Subjt:  KEVEANVATRK-KIPRGSTSKAKAGPSK-NRNVQMKKKKEKGKAPVVDKGKNVT-KGICFHCNQDGHRKRNCPKYLAEKKAEKATTGKYDLLVVETCLVE

Query:  YDTSTWVLDSEATNHICFSFQETSSWKKLEEGEIILKVGTGNVVSAK
         + STW+LDS ATNHICFSFQE SSWK L EG+I LKVGTG +VSAK
Subjt:  YDTSTWVLDSEATNHICFSFQETSSWKKLEEGEIILKVGTGNVVSAK

KAA0054490.1 gag/pol protein [Cucumis melo var. makuwa]

3.6e-102

58.24

Show/hide

Query:  MNSSIVQLLASGKLNGDNYSTWKNNLNTILVVDDLRFVLTEECPQTPAANANRNVREAFDRWVKANDKARVYILASMTDVLAKKHEPLMTAKEILDSLKA
        M S+ + +LA+ KLNG+NY++WKN +NT+L++DDLRFVL EECPQ PAANA R VRE ++RW KAN+KAR YILAS+++VLAKKHE ++TA+EI+DSL+ 
Subjt:  MNSSIVQLLASGKLNGDNYSTWKNNLNTILVVDDLRFVLTEECPQTPAANANRNVREAFDRWVKANDKARVYILASMTDVLAKKHEPLMTAKEILDSLKA

Query:  MFRQPSSTLRHEALKYVYNKHMKEGTSVREHVLDMMVHFNTAEVNGATIDEASQ----------------------------TTLLNELQRFQNLTKAKG
        MF Q S  ++H+ALKY+YN  M EG SVREHVL+MMVHFN AE+NGA IDEASQ                            TTLLNELQ F++L K KG
Subjt:  MFRQPSSTLRHEALKYVYNKHMKEGTSVREHVLDMMVHFNTAEVNGATIDEASQ----------------------------TTLLNELQRFQNLTKAKG

Query:  KEVEANVAT-RKKIPRGSTSKAKAGPSKNRNVQMKKKK--EKGKAPV----VDKGKNVTKGICFHCNQDGHRKRNCPKYLAEKKAEKATTGKYDLLVVET
        ++ EANVAT  +K  RGSTS  K+ PS + N + KKKK  +  KA +      K     KGICFHCNQ+GH KRNCPKYLAEKK  KA  GKYDLLV+ET
Subjt:  KEVEANVAT-RKKIPRGSTSKAKAGPSKNRNVQMKKKK--EKGKAPV----VDKGKNVTKGICFHCNQDGHRKRNCPKYLAEKKAEKATTGKYDLLVVET

Query:  CLVEYDTSTWVLDSEATNHICFSFQETSSWKKLEEGEIILKVGTGNVVSAKA
        CLVE D S W++DS ATNH+C SFQ  SSW++LE GE+ ++VGTG+VVSA A
Subjt:  CLVEYDTSTWVLDSEATNHICFSFQETSSWKKLEEGEIILKVGTGNVVSAKA

TYK14550.1 gag/pol protein [Cucumis melo var. makuwa]

3.6e-102

58.24

Show/hide

Query:  MNSSIVQLLASGKLNGDNYSTWKNNLNTILVVDDLRFVLTEECPQTPAANANRNVREAFDRWVKANDKARVYILASMTDVLAKKHEPLMTAKEILDSLKA
        M S+ + +LA+ KLNG+NY++WKN +NT+L++DDLRFVL EECPQ PAANA R VRE ++RW KAN+KAR YILAS+++VLAKKHE ++TA+EI+DSL+ 
Subjt:  MNSSIVQLLASGKLNGDNYSTWKNNLNTILVVDDLRFVLTEECPQTPAANANRNVREAFDRWVKANDKARVYILASMTDVLAKKHEPLMTAKEILDSLKA

Query:  MFRQPSSTLRHEALKYVYNKHMKEGTSVREHVLDMMVHFNTAEVNGATIDEASQ----------------------------TTLLNELQRFQNLTKAKG
        MF Q S  ++H+ALKY+YN  M EG SVREHVL+MMVHFN AE+NGA IDEASQ                            TTLLNELQ F++L K KG
Subjt:  MFRQPSSTLRHEALKYVYNKHMKEGTSVREHVLDMMVHFNTAEVNGATIDEASQ----------------------------TTLLNELQRFQNLTKAKG

Query:  KEVEANVAT-RKKIPRGSTSKAKAGPSKNRNVQMKKKK--EKGKAPV----VDKGKNVTKGICFHCNQDGHRKRNCPKYLAEKKAEKATTGKYDLLVVET
        ++ EANVAT  +K  RGSTS  K+ PS + N + KKKK  +  KA +      K     KGICFHCNQ+GH KRNCPKYLAEKK  KA  GKYDLLV+ET
Subjt:  KEVEANVAT-RKKIPRGSTSKAKAGPSKNRNVQMKKKK--EKGKAPV----VDKGKNVTKGICFHCNQDGHRKRNCPKYLAEKKAEKATTGKYDLLVVET

Query:  CLVEYDTSTWVLDSEATNHICFSFQETSSWKKLEEGEIILKVGTGNVVSAKA
        CLVE D S W++DS ATNH+C SFQ  SSW++LE GE+ ++VGTG+VVSA A
Subjt:  CLVEYDTSTWVLDSEATNHICFSFQETSSWKKLEEGEIILKVGTGNVVSAKA

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SMH8 Gag/pol protein

1.8e-102

58.24

Show/hide

Query:  MNSSIVQLLASGKLNGDNYSTWKNNLNTILVVDDLRFVLTEECPQTPAANANRNVREAFDRWVKANDKARVYILASMTDVLAKKHEPLMTAKEILDSLKA
        M S+ + +LA+ KLNG+NY++WKN +NT+L++DDLRFVL EECPQ PAANA R VRE ++RW KAN+KAR YILAS+++VLAKKHE ++TA+EI+DSL+ 
Subjt:  MNSSIVQLLASGKLNGDNYSTWKNNLNTILVVDDLRFVLTEECPQTPAANANRNVREAFDRWVKANDKARVYILASMTDVLAKKHEPLMTAKEILDSLKA

Query:  MFRQPSSTLRHEALKYVYNKHMKEGTSVREHVLDMMVHFNTAEVNGATIDEASQ----------------------------TTLLNELQRFQNLTKAKG
        MF Q S  ++H+ALKY+YN  M EG SVREHVL+MMVHFN AE+NGA IDEASQ                            TTLLNELQ F++L K KG
Subjt:  MFRQPSSTLRHEALKYVYNKHMKEGTSVREHVLDMMVHFNTAEVNGATIDEASQ----------------------------TTLLNELQRFQNLTKAKG

Query:  KEVEANVAT-RKKIPRGSTSKAKAGPSKNRNVQMKKKK--EKGKAPV----VDKGKNVTKGICFHCNQDGHRKRNCPKYLAEKKAEKATTGKYDLLVVET
        ++ EANVAT  +K  RGSTS  K+ PS + N + KKKK  +  KA +      K     KGICFHCNQ+GH KRNCPKYLAEKK  KA  GKYDLLV+ET
Subjt:  KEVEANVAT-RKKIPRGSTSKAKAGPSKNRNVQMKKKK--EKGKAPV----VDKGKNVTKGICFHCNQDGHRKRNCPKYLAEKKAEKATTGKYDLLVVET

Query:  CLVEYDTSTWVLDSEATNHICFSFQETSSWKKLEEGEIILKVGTGNVVSAKA
        CLVE D S W++DS ATNH+C SFQ  SSW++LE GE+ ++VGTG+VVSA A
Subjt:  CLVEYDTSTWVLDSEATNHICFSFQETSSWKKLEEGEIILKVGTGNVVSAKA

A0A5A7TWB9 Gag/pol protein

1.8e-102

58.24

Show/hide

Query:  MNSSIVQLLASGKLNGDNYSTWKNNLNTILVVDDLRFVLTEECPQTPAANANRNVREAFDRWVKANDKARVYILASMTDVLAKKHEPLMTAKEILDSLKA
        M S+ + +LA+ KLNG+NY++WKN +NT+L++DDLRFVL EECPQ PAANA R VRE ++RW KAN+KAR YILAS+++VLAKKHE ++TA+EI+DSL+ 
Subjt:  MNSSIVQLLASGKLNGDNYSTWKNNLNTILVVDDLRFVLTEECPQTPAANANRNVREAFDRWVKANDKARVYILASMTDVLAKKHEPLMTAKEILDSLKA

Query:  MFRQPSSTLRHEALKYVYNKHMKEGTSVREHVLDMMVHFNTAEVNGATIDEASQ----------------------------TTLLNELQRFQNLTKAKG
        MF Q S  ++H+ALKY+YN  M EG SVREHVL+MMVHFN AE+NGA IDEASQ                            TTLLNELQ F++L K KG
Subjt:  MFRQPSSTLRHEALKYVYNKHMKEGTSVREHVLDMMVHFNTAEVNGATIDEASQ----------------------------TTLLNELQRFQNLTKAKG

Query:  KEVEANVAT-RKKIPRGSTSKAKAGPSKNRNVQMKKKK--EKGKAPV----VDKGKNVTKGICFHCNQDGHRKRNCPKYLAEKKAEKATTGKYDLLVVET
        ++ EANVAT  +K  RGSTS  K+ PS + N + KKKK  +  KA +      K     KGICFHCNQ+GH KRNCPKYLAEKK  KA  GKYDLLV+ET
Subjt:  KEVEANVAT-RKKIPRGSTSKAKAGPSKNRNVQMKKKK--EKGKAPV----VDKGKNVTKGICFHCNQDGHRKRNCPKYLAEKKAEKATTGKYDLLVVET

Query:  CLVEYDTSTWVLDSEATNHICFSFQETSSWKKLEEGEIILKVGTGNVVSAKA
        CLVE D S W++DS ATNH+C SFQ  SSW++LE GE+ ++VGTG+VVSA A
Subjt:  CLVEYDTSTWVLDSEATNHICFSFQETSSWKKLEEGEIILKVGTGNVVSAKA

A0A5A7TWX1 Gag/pol protein

1.9e-117

66.86

Show/hide

Query:  MNSSIVQLLASGKLNGDNYSTWKNNLNTILVVDDLRFVLTEECPQTPAANANRNVREAFDRWVKANDKARVYILASMTDVLAKKHEPLMTAKEILDSLKA
        MNS IVQLLAS KLN DNY+TWK+NLNTILVVDDLRFVLTEECPQTPA+NANR  REA+DRW+KAN+KARVYILASM+DVLAKKHE L TAKEI+DSLK 
Subjt:  MNSSIVQLLASGKLNGDNYSTWKNNLNTILVVDDLRFVLTEECPQTPAANANRNVREAFDRWVKANDKARVYILASMTDVLAKKHEPLMTAKEILDSLKA

Query:  MFRQPSSTLRHEALKYVYNKHMKEGTSVREHVLDMMVHFNTAEVNGATIDEASQ----------------------------TTLLNELQRFQNLTKAKG
        MF QP  +LRH+A+KY+Y K MKEGTS+REHVL MM+HFN AEVNG  IDEA+Q                            TTLLNELQRFQNLT  K 
Subjt:  MFRQPSSTLRHEALKYVYNKHMKEGTSVREHVLDMMVHFNTAEVNGATIDEASQ----------------------------TTLLNELQRFQNLTKAKG

Query:  KEVEANVATRK-KIPRGSTSKAKAGPSK-NRNVQMKKKKEKGKAPVVDKGKNVT-KGICFHCNQDGHRKRNCPKYLAEKKAEKATTGKYDLLVVETCLVE
        KE+EAN+AT K K  RGS+SK+K GPSK NR ++   KK KGK P  +KGK    KG C+HC ++GH   NCPKYL +KKAEK    KYDLLV+ETCLVE
Subjt:  KEVEANVATRK-KIPRGSTSKAKAGPSK-NRNVQMKKKKEKGKAPVVDKGKNVT-KGICFHCNQDGHRKRNCPKYLAEKKAEKATTGKYDLLVVETCLVE

Query:  YDTSTWVLDSEATNHICFSFQETSSWKKLEEGEIILKVGTGNVVSAK
         + STW+LDS ATNHICFSFQE SSWK L EG+I LKVGTG +VSAK
Subjt:  YDTSTWVLDSEATNHICFSFQETSSWKKLEEGEIILKVGTGNVVSAK

A0A5D3CPJ6 Gag/pol protein

1.8e-102

58.24

Show/hide

Query:  MNSSIVQLLASGKLNGDNYSTWKNNLNTILVVDDLRFVLTEECPQTPAANANRNVREAFDRWVKANDKARVYILASMTDVLAKKHEPLMTAKEILDSLKA
        M S+ + +LA+ KLNG+NY++WKN +NT+L++DDLRFVL EECPQ PAANA R VRE ++RW KAN+KAR YILAS+++VLAKKHE ++TA+EI+DSL+ 
Subjt:  MNSSIVQLLASGKLNGDNYSTWKNNLNTILVVDDLRFVLTEECPQTPAANANRNVREAFDRWVKANDKARVYILASMTDVLAKKHEPLMTAKEILDSLKA

Query:  MFRQPSSTLRHEALKYVYNKHMKEGTSVREHVLDMMVHFNTAEVNGATIDEASQ----------------------------TTLLNELQRFQNLTKAKG
        MF Q S  ++H+ALKY+YN  M EG SVREHVL+MMVHFN AE+NGA IDEASQ                            TTLLNELQ F++L K KG
Subjt:  MFRQPSSTLRHEALKYVYNKHMKEGTSVREHVLDMMVHFNTAEVNGATIDEASQ----------------------------TTLLNELQRFQNLTKAKG

Query:  KEVEANVAT-RKKIPRGSTSKAKAGPSKNRNVQMKKKK--EKGKAPV----VDKGKNVTKGICFHCNQDGHRKRNCPKYLAEKKAEKATTGKYDLLVVET
        ++ EANVAT  +K  RGSTS  K+ PS + N + KKKK  +  KA +      K     KGICFHCNQ+GH KRNCPKYLAEKK  KA  GKYDLLV+ET
Subjt:  KEVEANVAT-RKKIPRGSTSKAKAGPSKNRNVQMKKKK--EKGKAPV----VDKGKNVTKGICFHCNQDGHRKRNCPKYLAEKKAEKATTGKYDLLVVET

Query:  CLVEYDTSTWVLDSEATNHICFSFQETSSWKKLEEGEIILKVGTGNVVSAKA
        CLVE D S W++DS ATNH+C SFQ  SSW++LE GE+ ++VGTG+VVSA A
Subjt:  CLVEYDTSTWVLDSEATNHICFSFQETSSWKKLEEGEIILKVGTGNVVSAKA

E2GK51 Gag/pol protein (Fragment)

1.1e-128

73.78

Show/hide

Query:  MNSSIVQLLASGKLNGDNYSTWKNNLNTILVVDDLRFVLTEECPQTPAANANRNVREAFDRWVKANDKARVYILASMTDVLAKKHEPLMTAKEILDSLKA
        MN+SIVQLLAS KLNGDNYS WK+NLNTILVVDDLRFVLTEECPQ PA NANR VREA+DRWVKANDKARVYILASMTDVLAKKH+ + TAK I+DSL+ 
Subjt:  MNSSIVQLLASGKLNGDNYSTWKNNLNTILVVDDLRFVLTEECPQTPAANANRNVREAFDRWVKANDKARVYILASMTDVLAKKHEPLMTAKEILDSLKA

Query:  MFRQPSSTLRHEALKYVYNKHMKEGTSVREHVLDMMVHFNTAEVNGATIDEASQ----------------------------TTLLNELQRFQNLTKAKG
        MF QPS +LRHEA+K++Y K MKEGTSVREHVLDMM+HFN AEVNG  IDEA+Q                            TTLLNELQRFQNLT +KG
Subjt:  MFRQPSSTLRHEALKYVYNKHMKEGTSVREHVLDMMVHFNTAEVNGATIDEASQ----------------------------TTLLNELQRFQNLTKAKG

Query:  KEVEANVA-TRKKIPRGSTSKAKAGPSKNRNVQMKKKKEKGKAPVVDK-GKNVTKGICFHCNQDGHRKRNCPKYLAEKKAEKATTGKYDLLVVETCLVEY
        KEVEANVA T++K  RGS+SK K GPSK    QM KKK KGKAP   K  KN  KG CFHCNQDGH KRNCPKYLAEKKAEKAT GKYDLLVVETCLVE 
Subjt:  KEVEANVA-TRKKIPRGSTSKAKAGPSKNRNVQMKKKKEKGKAPVVDK-GKNVTKGICFHCNQDGHRKRNCPKYLAEKKAEKATTGKYDLLVVETCLVEY

Query:  DTSTWVLDSEATNHICFSFQETSSWKKLEEGEIILKVGTGNVVSAKA
        D STW+LDS ATNHICFSFQETSSWKKL+EGEI LKVGTG VVSA+A
Subjt:  DTSTWVLDSEATNHICFSFQETSSWKKLEEGEIILKVGTGNVVSAKA

SwissProt top hits

e value

%identity

Alignment

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94

2.7e-07

25.41

Show/hide

Query:  KLNGDN-YSTWKNNLNTILVVDDLRFVLTEECPQTPAANANRNVREAFDRWVKANDKARVYILASMTDVLAKKHEPLMTAKEILDSLKAMFRQPSSTLRH
        K NGDN +STW+  +  +L+   L  VL  +  +     A        + W   +++A   I   ++D +        TA+ I   L++++   + T + 
Subjt:  KLNGDN-YSTWKNNLNTILVVDDLRFVLTEECPQTPAANANRNVREAFDRWVKANDKARVYILASMTDVLAKKHEPLMTAKEILDSLKAMFRQPSSTLRH

Query:  EALKYVYNKHMKEGTSVREHVLDMMVHFNTAEVN-GATIDEASQT-TLLNEL-QRFQNL--------TKAKGKEVEANVATRKKIPRGSTSKAKAGPSKN
           K +Y  HM EGT+   H L++     T   N G  I+E  +   LLN L   + NL        T  + K+V + +   +K+ +   ++ +A  ++ 
Subjt:  EALKYVYNKHMKEGTSVREHVLDMMVHFNTAEVN-GATIDEASQT-TLLNEL-QRFQNL--------TKAKGKEVEANVATRKKIPRGSTSKAKAGPSKN

Query:  RNVQMKKKKEK-GKAPVVDKGKNVTKG---ICFHCNQDGHRKRNCP---KYLAEKKAEK------ATTGKYDLLVV-----ETCL-VEYDTSTWVLDSEA
        R    ++     G++    K KN +K     C++CNQ GH KR+CP   K   E   +K      A     D +V+     E C+ +    S WV+D+ A
Subjt:  RNVQMKKKKEK-GKAPVVDKGKNVTKG---ICFHCNQDGHRKRNCP---KYLAEKKAEK------ATTGKYDLLVV-----ETCL-VEYDTSTWVLDSEA

Query:  TNH
        ++H
Subjt:  TNH

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGAATAGCTCAATAGTTCAACTCTTAGCTTCGGGAAAACTAAACGGAGATAATTATTCAACGTGGAAAAACAATCTGAATACAATACTAGTCGTCGATGACCTA
CGATTCGTCTTAACTGAGGAATGTCCACAAACCCCTGCCGCAAATGCCAACCGAAATGTTCGGGAAGCATTTGATCGATGGGTCAAAGCCAACGATAAGGCCCGT
GTCTACATTCTTGCAAGCATGACTGATGTATTGGCAAAGAAACATGAACCCTTGATGACTGCAAAGGAAATCTTGGATTCATTAAAGGCAATGTTCAGGCAACCT
TCATCGACTTTGAGACACGAGGCACTTAAATACGTTTACAACAAGCATATGAAGGAGGGGACCTCTGTCAGAGAACATGTCCTGGACATGATGGTCCACTTCAAT
ACTGCTGAAGTGAATGGGGCCACCATTGATGAGGCAAGTCAAACAACCCTTCTAAACGAGCTCCAGCGTTTCCAGAACCTTACTAAAGCTAAGGGGAAGGAAGTG
GAGGCAAACGTTGCCACCAGAAAGAAAATACCAAGAGGTTCGACCTCTAAAGCAAAAGCTGGACCTTCAAAAAACAGAAATGTTCAAATGAAGAAGAAGAAGGAA
AAGGGGAAGGCTCCCGTGGTTGACAAGGGAAAGAATGTTACAAAGGGAATCTGTTTCCATTGCAACCAAGACGGGCATCGGAAGAGAAATTGCCCGAAGTACCTT
GCCGAGAAGAAGGCAGAGAAAGCAACGACAGGTAAATACGATTTACTAGTTGTTGAAACATGTTTAGTGGAGTATGATACTTCCACCTGGGTACTTGATTCAGAA
GCCACTAACCATATTTGTTTCTCATTTCAGGAAACTAGTTCCTGGAAGAAGCTGGAAGAAGGCGAGATAATTCTCAAAGTTGGAACTGGAAATGTTGTCTCAGCC
AAAGCAGATTGGGAGGCTGGTTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MNSSIVQLLASGKLNGDNYSTWKNNLNTILVVDDLRFVLTEECPQTPAANANRNVREAFDRWVKANDKARVYILASMTDVLAKKHEPLMTAKEILDSLKAMFRQP
SSTLRHEALKYVYNKHMKEGTSVREHVLDMMVHFNTAEVNGATIDEASQTTLLNELQRFQNLTKAKGKEVEANVATRKKIPRGSTSKAKAGPSKNRNVQMKKKKE
KGKAPVVDKGKNVTKGICFHCNQDGHRKRNCPKYLAEKKAEKATTGKYDLLVVETCLVEYDTSTWVLDSEATNHICFSFQETSSWKKLEEGEIILKVGTGNVVSA
KADWEAG

Moc02g17150 (gene) of Bitter gourd (OHB3-1) v2 genome