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Moc02g17320 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc02g17320
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr2:12972489..12972917
RNA-Seq ExpressionMoc02g17320
SyntenyMoc02g17320
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022142767.1 uncharacterized protein LOC111012805 [Momordica charantia]2.3e-2374.67Show/hide
Query:  RRATKSLHDYMARFNEEKLQVEGVTDAVSLLAFMSGIKDEHLSFFFGKKTPNVFSEALSRAQMYMSAREFFHSKK
        +R T+SLHDY+ RFN+EKLQVEG+TDAVSLLAF+ G++DEHLSF FGK+TP+ FSEALSRAQ YMSA EFF+SK+
Subjt:  RRATKSLHDYMARFNEEKLQVEGVTDAVSLLAFMSGIKDEHLSFFFGKKTPNVFSEALSRAQMYMSAREFFHSKK

XP_022150035.1 uncharacterized protein LOC111018307 [Momordica charantia]3.8e-2652.7Show/hide
Query:  MDGYHE------VVEATMCLVFSTTLSGSAR-------------------------------------------RATKSLHDYMARFNEEKLQVEGVTDA
        +D Y E      V EA  C VFSTTLSGSAR                                           RAT+SLHDY+ARFNEEKLQVEG+T+A
Subjt:  MDGYHE------VVEATMCLVFSTTLSGSAR-------------------------------------------RATKSLHDYMARFNEEKLQVEGVTDA

Query:  VSLLAFMSGIKDEHLSFFFGKKTPNVFSEALSRAQMYMSAREFFHSKK
        VSL+AFMS I+DEHLSF FGKKTP+ FSEALSRAQ YMSA EFF SK+
Subjt:  VSLLAFMSGIKDEHLSFFFGKKTPNVFSEALSRAQMYMSAREFFHSKK

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]1.7e-2652.03Show/hide
Query:  MDGYHE------VVEATMCLVFSTTLSGSAR-------------------------------------------RATKSLHDYMARFNEEKLQVEGVTDA
        +D Y E      V EA  C VFSTTL+GSAR                                           R T+SL DY+ARFNEEKLQVEG+TDA
Subjt:  MDGYHE------VVEATMCLVFSTTLSGSAR-------------------------------------------RATKSLHDYMARFNEEKLQVEGVTDA

Query:  VSLLAFMSGIKDEHLSFFFGKKTPNVFSEALSRAQMYMSAREFFHSKK
        VSLLAFMSG++DEHLSF FGK+TPN FSEALSRAQ YMSA EFF+SK+
Subjt:  VSLLAFMSGIKDEHLSFFFGKKTPNVFSEALSRAQMYMSAREFFHSKK

XP_022159109.1 uncharacterized protein LOC111025548 [Momordica charantia]1.0e-2348.65Show/hide
Query:  MDGYHE------VVEATMCLVFSTTLSGSAR-------------------------------------------RATKSLHDYMARFNEEKLQVEGVTDA
        +D Y E      V +A  C VFSTTL+GSAR                                           R  +SLHDY+ARFNEEKLQ+EG+TDA
Subjt:  MDGYHE------VVEATMCLVFSTTLSGSAR-------------------------------------------RATKSLHDYMARFNEEKLQVEGVTDA

Query:  VSLLAFMSGIKDEHLSFFFGKKTPNVFSEALSRAQMYMSAREFFHSKK
        VSLLAFMSG++DEHLSF F K+TP+ FSEALSRAQ YMSA EF +SK+
Subjt:  VSLLAFMSGIKDEHLSFFFGKKTPNVFSEALSRAQMYMSAREFFHSKK

XP_022159368.1 uncharacterized protein LOC111025785 [Momordica charantia]1.8e-2374.67Show/hide
Query:  RRATKSLHDYMARFNEEKLQVEGVTDAVSLLAFMSGIKDEHLSFFFGKKTPNVFSEALSRAQMYMSAREFFHSKK
        +R T+SLHDY+ARFN+EKLQ+E +TD VSLLAFMSG++DEHLSF FGKKTP+ FSE LSRAQ YMSA EFF+SK+
Subjt:  RRATKSLHDYMARFNEEKLQVEGVTDAVSLLAFMSGIKDEHLSFFFGKKTPNVFSEALSRAQMYMSAREFFHSKK

TrEMBL top hitse value%identityAlignment
A0A6J1CNT2 uncharacterized protein LOC1110128051.1e-2374.67Show/hide
Query:  RRATKSLHDYMARFNEEKLQVEGVTDAVSLLAFMSGIKDEHLSFFFGKKTPNVFSEALSRAQMYMSAREFFHSKK
        +R T+SLHDY+ RFN+EKLQVEG+TDAVSLLAF+ G++DEHLSF FGK+TP+ FSEALSRAQ YMSA EFF+SK+
Subjt:  RRATKSLHDYMARFNEEKLQVEGVTDAVSLLAFMSGIKDEHLSFFFGKKTPNVFSEALSRAQMYMSAREFFHSKK

A0A6J1D7D2 uncharacterized protein LOC1110183071.8e-2652.7Show/hide
Query:  MDGYHE------VVEATMCLVFSTTLSGSAR-------------------------------------------RATKSLHDYMARFNEEKLQVEGVTDA
        +D Y E      V EA  C VFSTTLSGSAR                                           RAT+SLHDY+ARFNEEKLQVEG+T+A
Subjt:  MDGYHE------VVEATMCLVFSTTLSGSAR-------------------------------------------RATKSLHDYMARFNEEKLQVEGVTDA

Query:  VSLLAFMSGIKDEHLSFFFGKKTPNVFSEALSRAQMYMSAREFFHSKK
        VSL+AFMS I+DEHLSF FGKKTP+ FSEALSRAQ YMSA EFF SK+
Subjt:  VSLLAFMSGIKDEHLSFFFGKKTPNVFSEALSRAQMYMSAREFFHSKK

A0A6J1DWY0 uncharacterized protein LOC1110252938.2e-2752.03Show/hide
Query:  MDGYHE------VVEATMCLVFSTTLSGSAR-------------------------------------------RATKSLHDYMARFNEEKLQVEGVTDA
        +D Y E      V EA  C VFSTTL+GSAR                                           R T+SL DY+ARFNEEKLQVEG+TDA
Subjt:  MDGYHE------VVEATMCLVFSTTLSGSAR-------------------------------------------RATKSLHDYMARFNEEKLQVEGVTDA

Query:  VSLLAFMSGIKDEHLSFFFGKKTPNVFSEALSRAQMYMSAREFFHSKK
        VSLLAFMSG++DEHLSF FGK+TPN FSEALSRAQ YMSA EFF+SK+
Subjt:  VSLLAFMSGIKDEHLSFFFGKKTPNVFSEALSRAQMYMSAREFFHSKK

A0A6J1DYL6 uncharacterized protein LOC1110257858.5e-2474.67Show/hide
Query:  RRATKSLHDYMARFNEEKLQVEGVTDAVSLLAFMSGIKDEHLSFFFGKKTPNVFSEALSRAQMYMSAREFFHSKK
        +R T+SLHDY+ARFN+EKLQ+E +TD VSLLAFMSG++DEHLSF FGKKTP+ FSE LSRAQ YMSA EFF+SK+
Subjt:  RRATKSLHDYMARFNEEKLQVEGVTDAVSLLAFMSGIKDEHLSFFFGKKTPNVFSEALSRAQMYMSAREFFHSKK

A0A6J1E1E7 uncharacterized protein LOC1110255485.0e-2448.65Show/hide
Query:  MDGYHE------VVEATMCLVFSTTLSGSAR-------------------------------------------RATKSLHDYMARFNEEKLQVEGVTDA
        +D Y E      V +A  C VFSTTL+GSAR                                           R  +SLHDY+ARFNEEKLQ+EG+TDA
Subjt:  MDGYHE------VVEATMCLVFSTTLSGSAR-------------------------------------------RATKSLHDYMARFNEEKLQVEGVTDA

Query:  VSLLAFMSGIKDEHLSFFFGKKTPNVFSEALSRAQMYMSAREFFHSKK
        VSLLAFMSG++DEHLSF F K+TP+ FSEALSRAQ YMSA EF +SK+
Subjt:  VSLLAFMSGIKDEHLSFFFGKKTPNVFSEALSRAQMYMSAREFFHSKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGGATATCACGAGGTGGTGGAGGCGACCATGTGTCTGGTGTTCTCGACAACTTTGAGTGGGTCGGCCAGGAGGGCAACAAAGAGCCTTCACGACTATATGGCTCG
ATTCAATGAGGAGAAATTACAGGTTGAGGGTGTCACGGATGCAGTATCTCTACTAGCTTTCATGTCCGGCATCAAGGACGAACACCTTTCATTCTTCTTTGGGAAAAAGA
CGCCAAACGTCTTCTCGGAGGCACTCAGCCGAGCTCAGATGTACATGAGCGCCAGAGAGTTCTTCCACTCAAAGAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGATGGATATCACGAGGTGGTGGAGGCGACCATGTGTCTGGTGTTCTCGACAACTTTGAGTGGGTCGGCCAGGAGGGCAACAAAGAGCCTTCACGACTATATGGCTCG
ATTCAATGAGGAGAAATTACAGGTTGAGGGTGTCACGGATGCAGTATCTCTACTAGCTTTCATGTCCGGCATCAAGGACGAACACCTTTCATTCTTCTTTGGGAAAAAGA
CGCCAAACGTCTTCTCGGAGGCACTCAGCCGAGCTCAGATGTACATGAGCGCCAGAGAGTTCTTCCACTCAAAGAAATAG
Protein sequenceShow/hide protein sequence
MDGYHEVVEATMCLVFSTTLSGSARRATKSLHDYMARFNEEKLQVEGVTDAVSLLAFMSGIKDEHLSFFFGKKTPNVFSEALSRAQMYMSAREFFHSKK