; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc02g17470 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc02g17470
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionCCHC-type domain-containing protein
Genome locationchr2:13076833..13077624
RNA-Seq ExpressionMoc02g17470
SyntenyMoc02g17470
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8645659.1 hypothetical protein Csa_020439 [Cucumis sativus]5.8e-4048.26Show/hide
Query:  MRTRAQSVSFEELHVFMKSEESAIEKQMKREDLVTQPNALFASSPQSQNRTSAFHPNQSHDRGRGKNNGRGKANFAPTFTNQGRGRSSGNFFTSFQADNR
        MRTR+Q V+FEELHV +++EESA+ KQ K +D   QP  L +SS    +    F+ N     G GKN G G+ +F       G  +           DN 
Subjt:  MRTRAQSVSFEELHVFMKSEESAIEKQMKREDLVTQPNALFASSPQSQNRTSAFHPNQSHDRGRGKNNGRGKANFAPTFTNQGRGRSSGNFFTSFQADNR

Query:  SPCQICGKLGHTALDCYNRMNFHFQGRHPPPQLAAMVAVQNNSYLAVGNSSPTTWLADSECNTHMTADLSNLSIASIASDYNGEENISVGSGQSFPITHF
        + CQIC + GHTALDC+NRMN++FQGRHPP QLAAMVA QNN++L++ NSS    L DS CNTH+T+D   ++  S+A +YNGEE + VG+GQ+ PI+H 
Subjt:  SPCQICGKLGHTALDCYNRMNFHFQGRHPPPQLAAMVAVQNNSYLAVGNSSPTTWLADSECNTHMTADLSNLSIASIASDYNGEENISVGSGQSFPITHF

Query:  G
        G
Subjt:  G

KAG7015254.1 hypothetical protein SDJN02_22888, partial [Cucurbita argyrosperma subsp. argyrosperma]3.8e-3948.28Show/hide
Query:  MRTRAQSVSFEELHVFMKSEESAIEKQMKREDLVTQPNALFASSPQSQNRTSAFHPNQSHDRGRGKNNGRGKANFAPTFTNQGRGRSSGNFFTSFQADNR
        MRTR+  V+FEELHV +K+EESA+ KQ KR+DL  QP AL ASS    +  S F+ N    RGRG+ +G G      +F  QGRG  S        A+N 
Subjt:  MRTRAQSVSFEELHVFMKSEESAIEKQMKREDLVTQPNALFASSPQSQNRTSAFHPNQSHDRGRGKNNGRGKANFAPTFTNQGRGRSSGNFFTSFQADNR

Query:  SPCQICGKLGHTALDCYNRMNFHFQGRHPPPQLAAMVAVQNNSYLAVGNSSPTTWLADSECNTHMTADLSNLSIASIASDYNGEENISVGSGQSFPITHF
        S CQIC + GH ALDC+NRMN++F GRHPP  LAAMVA QNN++L++ N                    S+++  S+AS Y+GEE + VGSGQS PI+H 
Subjt:  SPCQICGKLGHTALDCYNRMNFHFQGRHPPPQLAAMVAVQNNSYLAVGNSSPTTWLADSECNTHMTADLSNLSIASIASDYNGEENISVGSGQSFPITHF

Query:  GCG
        GCG
Subjt:  GCG

XP_008448008.1 PREDICTED: uncharacterized protein LOC103490319 isoform X3 [Cucumis melo]1.1e-4148.6Show/hide
Query:  MRTRAQSVSFEELHVFMKSEESAIEKQMKREDLVTQPNALFASSPQSQNRTSAFHPNQSHDRGRGKNNGRGKANFAPTFTNQGRGRSSGNFFTSFQADNR
        MRTR+Q V+FEELHV +++EESA+ KQ K +D   QP  L +SS    +    F  N     G GK+ G G+     +F  Q RG  S     S   DN 
Subjt:  MRTRAQSVSFEELHVFMKSEESAIEKQMKREDLVTQPNALFASSPQSQNRTSAFHPNQSHDRGRGKNNGRGKANFAPTFTNQGRGRSSGNFFTSFQADNR

Query:  SPCQICGKLGHTALDCYNRMNFHFQGRHPPPQLAAMVAVQNNSYLAVGNSSPTTWLADSECNTHMTADLSNLSIASIASDYNGEENISVGSGQSFPITHF
        + CQIC + GHTALDC+NRMN++FQGRHPP QLAAMVA QNN++L++ NSS    L DS CNT +T+D   ++  S+A +YNGEE + +G+GQ+ P++H 
Subjt:  SPCQICGKLGHTALDCYNRMNFHFQGRHPPPQLAAMVAVQNNSYLAVGNSSPTTWLADSECNTHMTADLSNLSIASIASDYNGEENISVGSGQSFPITHF

Query:  GCGQVFGSNYVPQA
          GQVFG  +VP+A
Subjt:  GCGQVFGSNYVPQA

XP_011658579.1 uncharacterized protein LOC105436058 [Cucumis sativus]4.3e-4348.6Show/hide
Query:  MRTRAQSVSFEELHVFMKSEESAIEKQMKREDLVTQPNALFASSPQSQNRTSAFHPNQSHDRGRGKNNGRGKANFAPTFTNQGRGRSSGNFFTSFQADNR
        MRTR+Q V+FEELHV +++EESA+ KQ K +D   QP  L +SS    +    F+ N     G GKN G G+ +F       G  +           DN 
Subjt:  MRTRAQSVSFEELHVFMKSEESAIEKQMKREDLVTQPNALFASSPQSQNRTSAFHPNQSHDRGRGKNNGRGKANFAPTFTNQGRGRSSGNFFTSFQADNR

Query:  SPCQICGKLGHTALDCYNRMNFHFQGRHPPPQLAAMVAVQNNSYLAVGNSSPTTWLADSECNTHMTADLSNLSIASIASDYNGEENISVGSGQSFPITHF
        + CQIC + GHTALDC+NRMN++FQGRHPP QLAAMVA QNN++L++ NSS    L DS CNTH+T+D   ++  S+A +YNGEE + VG+GQ+ PI+H 
Subjt:  SPCQICGKLGHTALDCYNRMNFHFQGRHPPPQLAAMVAVQNNSYLAVGNSSPTTWLADSECNTHMTADLSNLSIASIASDYNGEENISVGSGQSFPITHF

Query:  GCGQVFGSNYVPQA
          GQVFG  +VP+A
Subjt:  GCGQVFGSNYVPQA

XP_022150845.1 uncharacterized protein LOC111018892 [Momordica charantia]4.5e-117100Show/hide
Query:  MRTRAQSVSFEELHVFMKSEESAIEKQMKREDLVTQPNALFASSPQSQNRTSAFHPNQSHDRGRGKNNGRGKANFAPTFTNQGRGRSSGNFFTSFQADNR
        MRTRAQSVSFEELHVFMKSEESAIEKQMKREDLVTQPNALFASSPQSQNRTSAFHPNQSHDRGRGKNNGRGKANFAPTFTNQGRGRSSGNFFTSFQADNR
Subjt:  MRTRAQSVSFEELHVFMKSEESAIEKQMKREDLVTQPNALFASSPQSQNRTSAFHPNQSHDRGRGKNNGRGKANFAPTFTNQGRGRSSGNFFTSFQADNR

Query:  SPCQICGKLGHTALDCYNRMNFHFQGRHPPPQLAAMVAVQNNSYLAVGNSSPTTWLADSECNTHMTADLSNLSIASIASDYNGEENISVGSGQSFPITHF
        SPCQICGKLGHTALDCYNRMNFHFQGRHPPPQLAAMVAVQNNSYLAVGNSSPTTWLADSECNTHMTADLSNLSIASIASDYNGEENISVGSGQSFPITHF
Subjt:  SPCQICGKLGHTALDCYNRMNFHFQGRHPPPQLAAMVAVQNNSYLAVGNSSPTTWLADSECNTHMTADLSNLSIASIASDYNGEENISVGSGQSFPITHF

Query:  GCGQVFGSNYVPQA
        GCGQVFGSNYVPQA
Subjt:  GCGQVFGSNYVPQA

TrEMBL top hitse value%identityAlignment
A0A1S3BI58 uncharacterized protein LOC103490319 isoform X27.0e-3948.26Show/hide
Query:  MRTRAQSVSFEELHVFMKSEESAIEKQMKREDLVTQPNALFASSPQSQNRTSAFHPNQSHDRGRGKNNGRGKANFAPTFTNQGRGRSSGNFFTSFQADNR
        MRTR+Q V+FEELHV +++EESA+ KQ K +D   QP  L +SS    +    F  N     G GK+ G G+     +F  Q RG  S     S   DN 
Subjt:  MRTRAQSVSFEELHVFMKSEESAIEKQMKREDLVTQPNALFASSPQSQNRTSAFHPNQSHDRGRGKNNGRGKANFAPTFTNQGRGRSSGNFFTSFQADNR

Query:  SPCQICGKLGHTALDCYNRMNFHFQGRHPPPQLAAMVAVQNNSYLAVGNSSPTTWLADSECNTHMTADLSNLSIASIASDYNGEENISVGSGQSFPITHF
        + CQIC + GHTALDC+NRMN++FQGRHPP QLAAMVA QNN++L++ NSS    L DS CNT +T+D   ++  S+A +YNGEE + +G+GQ+ P++H 
Subjt:  SPCQICGKLGHTALDCYNRMNFHFQGRHPPPQLAAMVAVQNNSYLAVGNSSPTTWLADSECNTHMTADLSNLSIASIASDYNGEENISVGSGQSFPITHF

Query:  G
        G
Subjt:  G

A0A1S3BIR3 uncharacterized protein LOC103490319 isoform X35.1e-4248.6Show/hide
Query:  MRTRAQSVSFEELHVFMKSEESAIEKQMKREDLVTQPNALFASSPQSQNRTSAFHPNQSHDRGRGKNNGRGKANFAPTFTNQGRGRSSGNFFTSFQADNR
        MRTR+Q V+FEELHV +++EESA+ KQ K +D   QP  L +SS    +    F  N     G GK+ G G+     +F  Q RG  S     S   DN 
Subjt:  MRTRAQSVSFEELHVFMKSEESAIEKQMKREDLVTQPNALFASSPQSQNRTSAFHPNQSHDRGRGKNNGRGKANFAPTFTNQGRGRSSGNFFTSFQADNR

Query:  SPCQICGKLGHTALDCYNRMNFHFQGRHPPPQLAAMVAVQNNSYLAVGNSSPTTWLADSECNTHMTADLSNLSIASIASDYNGEENISVGSGQSFPITHF
        + CQIC + GHTALDC+NRMN++FQGRHPP QLAAMVA QNN++L++ NSS    L DS CNT +T+D   ++  S+A +YNGEE + +G+GQ+ P++H 
Subjt:  SPCQICGKLGHTALDCYNRMNFHFQGRHPPPQLAAMVAVQNNSYLAVGNSSPTTWLADSECNTHMTADLSNLSIASIASDYNGEENISVGSGQSFPITHF

Query:  GCGQVFGSNYVPQA
          GQVFG  +VP+A
Subjt:  GCGQVFGSNYVPQA

A0A1S4DWT9 uncharacterized protein LOC103490319 isoform X17.0e-3948.26Show/hide
Query:  MRTRAQSVSFEELHVFMKSEESAIEKQMKREDLVTQPNALFASSPQSQNRTSAFHPNQSHDRGRGKNNGRGKANFAPTFTNQGRGRSSGNFFTSFQADNR
        MRTR+Q V+FEELHV +++EESA+ KQ K +D   QP  L +SS    +    F  N     G GK+ G G+     +F  Q RG  S     S   DN 
Subjt:  MRTRAQSVSFEELHVFMKSEESAIEKQMKREDLVTQPNALFASSPQSQNRTSAFHPNQSHDRGRGKNNGRGKANFAPTFTNQGRGRSSGNFFTSFQADNR

Query:  SPCQICGKLGHTALDCYNRMNFHFQGRHPPPQLAAMVAVQNNSYLAVGNSSPTTWLADSECNTHMTADLSNLSIASIASDYNGEENISVGSGQSFPITHF
        + CQIC + GHTALDC+NRMN++FQGRHPP QLAAMVA QNN++L++ NSS    L DS CNT +T+D   ++  S+A +YNGEE + +G+GQ+ P++H 
Subjt:  SPCQICGKLGHTALDCYNRMNFHFQGRHPPPQLAAMVAVQNNSYLAVGNSSPTTWLADSECNTHMTADLSNLSIASIASDYNGEENISVGSGQSFPITHF

Query:  G
        G
Subjt:  G

A0A5D3CLI6 T4.51.6e-3848.24Show/hide
Query:  MRTRAQSVSFEELHVFMKSEESAIEKQMKREDLVTQPNALFASSPQSQNRTSAFHPNQSHDRGRGKNNGRGKANFAPTFTNQGRGRSSGNFFTSFQADNR
        MRTR+Q V+FEELHV +++EESA+ KQ K +D   QP  L +SS    +    F  N     G GK+ G G+     +F  Q RG  S     S   DN 
Subjt:  MRTRAQSVSFEELHVFMKSEESAIEKQMKREDLVTQPNALFASSPQSQNRTSAFHPNQSHDRGRGKNNGRGKANFAPTFTNQGRGRSSGNFFTSFQADNR

Query:  SPCQICGKLGHTALDCYNRMNFHFQGRHPPPQLAAMVAVQNNSYLAVGNSSPTTWLADSECNTHMTADLSNLSIASIASDYNGEENISVGSGQSFPITH
        + CQIC + GHTALDC+NRMN++FQGRHPP QLAAMVA QNN++L++ NSS    L DS CNT +T+D   ++  S+A +YNGEE + +G+GQ+ P++H
Subjt:  SPCQICGKLGHTALDCYNRMNFHFQGRHPPPQLAAMVAVQNNSYLAVGNSSPTTWLADSECNTHMTADLSNLSIASIASDYNGEENISVGSGQSFPITH

A0A6J1D9L6 uncharacterized protein LOC1110188922.2e-117100Show/hide
Query:  MRTRAQSVSFEELHVFMKSEESAIEKQMKREDLVTQPNALFASSPQSQNRTSAFHPNQSHDRGRGKNNGRGKANFAPTFTNQGRGRSSGNFFTSFQADNR
        MRTRAQSVSFEELHVFMKSEESAIEKQMKREDLVTQPNALFASSPQSQNRTSAFHPNQSHDRGRGKNNGRGKANFAPTFTNQGRGRSSGNFFTSFQADNR
Subjt:  MRTRAQSVSFEELHVFMKSEESAIEKQMKREDLVTQPNALFASSPQSQNRTSAFHPNQSHDRGRGKNNGRGKANFAPTFTNQGRGRSSGNFFTSFQADNR

Query:  SPCQICGKLGHTALDCYNRMNFHFQGRHPPPQLAAMVAVQNNSYLAVGNSSPTTWLADSECNTHMTADLSNLSIASIASDYNGEENISVGSGQSFPITHF
        SPCQICGKLGHTALDCYNRMNFHFQGRHPPPQLAAMVAVQNNSYLAVGNSSPTTWLADSECNTHMTADLSNLSIASIASDYNGEENISVGSGQSFPITHF
Subjt:  SPCQICGKLGHTALDCYNRMNFHFQGRHPPPQLAAMVAVQNNSYLAVGNSSPTTWLADSECNTHMTADLSNLSIASIASDYNGEENISVGSGQSFPITHF

Query:  GCGQVFGSNYVPQA
        GCGQVFGSNYVPQA
Subjt:  GCGQVFGSNYVPQA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGAACCAGAGCTCAATCTGTTTCGTTTGAGGAACTTCATGTCTTCATGAAATCTGAAGAATCTGCAATCGAAAAACAAATGAAGCGTGAAGATCTTGTTACT
CAACCAAATGCTTTGTTCGCCTCTTCGCCGCAGTCTCAGAATCGTACATCTGCTTTTCATCCAAATCAGTCTCACGACAGAGGTCGTGGCAAGAACAATGGGCGT
GGTAAAGCTAATTTTGCTCCTACTTTCACTAATCAGGGAAGAGGTCGTTCTTCTGGCAATTTTTTTACTTCTTTTCAAGCTGATAATCGATCTCCCTGTCAAATC
TGTGGTAAGCTTGGTCACACGGCGCTAGACTGCTACAATCGAATGAATTTTCATTTTCAAGGAAGGCATCCTCCACCACAATTGGCAGCCATGGTTGCTGTCCAA
AATAATTCCTATTTGGCTGTTGGGAATTCTTCTCCAACTACTTGGTTGGCTGATTCCGAATGTAACACTCATATGACGGCAGATTTAAGCAATCTCTCTATTGCT
TCTATTGCTTCTGATTATAATGGTGAAGAAAACATCTCTGTTGGCAGTGGACAATCATTTCCCATCACTCATTTTGGTTGTGGACAAGTATTCGGGTCAAATTAT
GTTCCGCAGGCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGCGAACCAGAGCTCAATCTGTTTCGTTTGAGGAACTTCATGTCTTCATGAAATCTGAAGAATCTGCAATCGAAAAACAAATGAAGCGTGAAGATCTTGTTACT
CAACCAAATGCTTTGTTCGCCTCTTCGCCGCAGTCTCAGAATCGTACATCTGCTTTTCATCCAAATCAGTCTCACGACAGAGGTCGTGGCAAGAACAATGGGCGT
GGTAAAGCTAATTTTGCTCCTACTTTCACTAATCAGGGAAGAGGTCGTTCTTCTGGCAATTTTTTTACTTCTTTTCAAGCTGATAATCGATCTCCCTGTCAAATC
TGTGGTAAGCTTGGTCACACGGCGCTAGACTGCTACAATCGAATGAATTTTCATTTTCAAGGAAGGCATCCTCCACCACAATTGGCAGCCATGGTTGCTGTCCAA
AATAATTCCTATTTGGCTGTTGGGAATTCTTCTCCAACTACTTGGTTGGCTGATTCCGAATGTAACACTCATATGACGGCAGATTTAAGCAATCTCTCTATTGCT
TCTATTGCTTCTGATTATAATGGTGAAGAAAACATCTCTGTTGGCAGTGGACAATCATTTCCCATCACTCATTTTGGTTGTGGACAAGTATTCGGGTCAAATTAT
GTTCCGCAGGCCTAG
Protein sequenceShow/hide protein sequence
MRTRAQSVSFEELHVFMKSEESAIEKQMKREDLVTQPNALFASSPQSQNRTSAFHPNQSHDRGRGKNNGRGKANFAPTFTNQGRGRSSGNFFTSFQADNRSPCQI
CGKLGHTALDCYNRMNFHFQGRHPPPQLAAMVAVQNNSYLAVGNSSPTTWLADSECNTHMTADLSNLSIASIASDYNGEENISVGSGQSFPITHFGCGQVFGSNY
VPQA