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Moc02g18110 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc02g18110
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC111024115
Genome locationchr2:13528304..13546751
RNA-Seq ExpressionMoc02g18110
SyntenyMoc02g18110
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022157414.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111024115 [Momordica charantia]1.3e-3675.22Show/hide
Query:  DNTIPDVRRREALEGTMERLIHGMEALTERIGRLEAQNQAPERIPPP---RVLDEDDYEGDGSDHWEDDQATVLAAPRRGERHVGRGLDRGRGRGRGYHN
        +  I D RRREALEGT+ER+I  MEALTERIGRLE QNQA  R+PPP   RV+DED+YEGDGSDHWEDDQATVLA PR G+ HVG GLDRGRGRGRGYHN
Subjt:  DNTIPDVRRREALEGTMERLIHGMEALTERIGRLEAQNQAPERIPPP---RVLDEDDYEGDGSDHWEDDQATVLAAPRRGERHVGRGLDRGRGRGRGYHN

Query:  LQRRAPREDAQKD
         Q RAPR +AQ D
Subjt:  LQRRAPREDAQKD

XP_023520282.1 uncharacterized protein LOC111783592 [Cucurbita pepo subsp. pepo]8.0e-1856.25Show/hide
Query:  MSNPEDNT-IPDVRRREALEGTMERLIHGMEALTERIGRLEAQNQAPERIPPPRVLDEDDYEGDGSDHWEDDQATVLAAPRRGERHVGRGLDRGRGRGRG
        M NP+DNT I D R REA + TMERLI G+E LT+RIGRLE QNQA +RIP P     D YEGD SDH ED+              VG GL RGR  GR 
Subjt:  MSNPEDNT-IPDVRRREALEGTMERLIHGMEALTERIGRLEAQNQAPERIPPPRVLDEDDYEGDGSDHWEDDQATVLAAPRRGERHVGRGLDRGRGRGRG

Query:  YHNLQRRAPRED
        YHNLQ+R P +D
Subjt:  YHNLQRRAPRED

XP_023520835.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111784339 [Cucurbita pepo subsp. pepo]8.0e-1856.25Show/hide
Query:  MSNPEDNT-IPDVRRREALEGTMERLIHGMEALTERIGRLEAQNQAPERIPPPRVLDEDDYEGDGSDHWEDDQATVLAAPRRGERHVGRGLDRGRGRGRG
        M NP+DNT I D R REA + TMERLI G+E LT+RIGRLE QNQA +RIP P     D YEGD SDH ED+              VG GL RGR  GR 
Subjt:  MSNPEDNT-IPDVRRREALEGTMERLIHGMEALTERIGRLEAQNQAPERIPPPRVLDEDDYEGDGSDHWEDDQATVLAAPRRGERHVGRGLDRGRGRGRG

Query:  YHNLQRRAPRED
        YHNLQ+R P +D
Subjt:  YHNLQRRAPRED

XP_023541047.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111801285 [Cucurbita pepo subsp. pepo]9.8e-1653.57Show/hide
Query:  MSNPEDNT-IPDVRRREALEGTMERLIHGMEALTERIGRLEAQNQAPERIPPPRVLDEDDYEGDGSDHWEDDQATVLAAPRRGERHVGRGLDRGRGRGRG
        M NP+DNT I D R REA + TMERLI G+E LT+RIGRLE QNQA +R P P     + YEGD  DH ED+              VG GL RGR  GR 
Subjt:  MSNPEDNT-IPDVRRREALEGTMERLIHGMEALTERIGRLEAQNQAPERIPPPRVLDEDDYEGDGSDHWEDDQATVLAAPRRGERHVGRGLDRGRGRGRG

Query:  YHNLQRRAPRED
        YHNLQ+R P +D
Subjt:  YHNLQRRAPRED

XP_023553652.1 uncharacterized protein LOC111811140 [Cucurbita pepo subsp. pepo]4.0e-1755.36Show/hide
Query:  MSNPEDNT-IPDVRRREALEGTMERLIHGMEALTERIGRLEAQNQAPERIPPPRVLDEDDYEGDGSDHWEDDQATVLAAPRRGERHVGRGLDRGRGRGRG
        M NP+DNT I D R REA + TM+RLI G+E LT+RIGRLE QNQA +RIP P     D YEGD SDH ED+              VG GL RGR  GR 
Subjt:  MSNPEDNT-IPDVRRREALEGTMERLIHGMEALTERIGRLEAQNQAPERIPPPRVLDEDDYEGDGSDHWEDDQATVLAAPRRGERHVGRGLDRGRGRGRG

Query:  YHNLQRRAPRED
        YHNLQ+R P +D
Subjt:  YHNLQRRAPRED

TrEMBL top hitse value%identityAlignment
A0A5A7TK52 Retrotrans_gag domain-containing protein1.8e-1548.25Show/hide
Query:  DNTIPDVRRREALEGTMERLIHGMEALTERIGRLEAQNQAPERIP----PPRVLDEDDY--EGDGSDHWEDDQATVLAAPRRGERHVGRGLDRGRGRGRG
        +N   +V+ REA +G + R+I  MEALT+R+ R E +N+A ER+P    PP +++ +D   EGDGSD  +DDQ T+L  PRR    VG G+ R RGRGR 
Subjt:  DNTIPDVRRREALEGTMERLIHGMEALTERIGRLEAQNQAPERIP----PPRVLDEDDY--EGDGSDHWEDDQATVLAAPRRGERHVGRGLDRGRGRGRG

Query:  YHNLQRRAPREDAQ
        Y N+QRRA +E +Q
Subjt:  YHNLQRRAPREDAQ

A0A5A7TYI0 Uncharacterized protein1.3e-1044.12Show/hide
Query:  MEALTERIGRLEAQNQAPERIPPPRV------LDEDDYEGDGSDHWEDDQATVLAAPRRGERHVGRGLDRGRGRGRGYHNLQRRAPREDAQKDTSRPVLG
        MEALT+R+ RLE +N+A ER+PPP         + + YEGDG D  +DDQ T+L  PRR    VG G+ R RG G+ Y N+QRR  +E  Q + +   + 
Subjt:  MEALTERIGRLEAQNQAPERIPPPRV------LDEDDYEGDGSDHWEDDQATVLAAPRRGERHVGRGLDRGRGRGRGYHNLQRRAPREDAQKDTSRPVLG

Query:  HK
         K
Subjt:  HK

A0A5D3CHG3 Retrotrans_gag domain-containing protein7.1e-1250.53Show/hide
Query:  LIHGMEALTERIGRLEAQNQAPERIP----PPRVLDEDDY--EGDGSDHWEDDQATVLAAPRRGERHVGRGLDRGRGRGRGYHNLQRRAPREDAQ
        +I  MEALT+R+ R E +N+A ER+P    PP +++ +D   EGDGSD  +DDQ T+L  PRR    VG G+ R RGRGR Y N+QRRA +E +Q
Subjt:  LIHGMEALTERIGRLEAQNQAPERIP----PPRVLDEDDY--EGDGSDHWEDDQATVLAAPRRGERHVGRGLDRGRGRGRGYHNLQRRAPREDAQ

A0A6J1DWE9 LOW QUALITY PROTEIN: uncharacterized protein LOC1110241156.3e-3775.22Show/hide
Query:  DNTIPDVRRREALEGTMERLIHGMEALTERIGRLEAQNQAPERIPPP---RVLDEDDYEGDGSDHWEDDQATVLAAPRRGERHVGRGLDRGRGRGRGYHN
        +  I D RRREALEGT+ER+I  MEALTERIGRLE QNQA  R+PPP   RV+DED+YEGDGSDHWEDDQATVLA PR G+ HVG GLDRGRGRGRGYHN
Subjt:  DNTIPDVRRREALEGTMERLIHGMEALTERIGRLEAQNQAPERIPPP---RVLDEDDYEGDGSDHWEDDQATVLAAPRRGERHVGRGLDRGRGRGRGYHN

Query:  LQRRAPREDAQKD
         Q RAPR +AQ D
Subjt:  LQRRAPREDAQKD

A0A6J1I7T3 LOW QUALITY PROTEIN: uncharacterized protein LOC1114699484.1e-1259.04Show/hide
Query:  MSNPEDNT-IPDVRRREALEGTMERLIHGMEALTERIGRLEAQNQAPERIPPPRVLDEDDYEGDGSDHWEDD-QATVLAAPRR
        M NP++NT I D R REA + TMERLI G+E LT+RIGRLE QNQA +RIP P     D YEGD SDH ED+ Q   L + RR
Subjt:  MSNPEDNT-IPDVRRREALEGTMERLIHGMEALTERIGRLEAQNQAPERIPPPRVLDEDDYEGDGSDHWEDD-QATVLAAPRR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGTGCAACGACAGCGTGACGTCAACAACAGGGACAATGATGATGATGGGGCGGGCATTGGCATGTCCAATCCAGAAGATAATACCATTCCCGATGTCCGAAGGAG
AGAGGCACTAGAAGGAACTATGGAACGATTGATTCATGGCATGGAGGCTTTGACAGAGCGGATAGGAAGGTTAGAGGCTCAAAACCAAGCTCCGGAGAGAATTCCACCAC
CACGTGTTCTGGATGAGGATGATTATGAAGGTGATGGATCTGATCATTGGGAGGACGATCAAGCTACAGTCTTGGCGGCTCCAAGACGGGGAGAGAGACATGTTGGTCGT
GGCTTAGATCGAGGGCGAGGCCGAGGAAGAGGCTACCATAATCTCCAACGGAGAGCTCCACGGGAGGATGCTCAAAAGGATACTAGTCGACCAGTTCTCGGACATAAAGG
AAAACCGATCGAAGTTCTAGATCAACAGGGTGACGAGATCCGACCAGATGACGGACAGAGGGATACTGGCCAACCAGTTCTTGGTCTGAAAGACAAACCGATCGAAGGTC
CGGATCAACAAGGTGACAAGATGGCCGCCTTAGAAGAGAGGGTAGAGGGAATGGACTGGAGCATGTCCCTACTTCTGCAAAAACTCGAGCAACATGAGGTGGAACAACCA
GTGCTTGTTCGCGATCCACGAAAGGGTAAAGCTTCGATGATTGAAGGAGTTGGGGAGACAACCAGTCATGCACGGACCAAGTTGAAGGTAGGAGGAAACGACAAACCTCG
AGCTAACGTCCTCGGCCAGACAGGCCGACAAGCAGTTGTACGACAATAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGGTGCAACGACAGCGTGACGTCAACAACAGGGACAATGATGATGATGGGGCGGGCATTGGCATGTCCAATCCAGAAGATAATACCATTCCCGATGTCCGAAGGAG
AGAGGCACTAGAAGGAACTATGGAACGATTGATTCATGGCATGGAGGCTTTGACAGAGCGGATAGGAAGGTTAGAGGCTCAAAACCAAGCTCCGGAGAGAATTCCACCAC
CACGTGTTCTGGATGAGGATGATTATGAAGGTGATGGATCTGATCATTGGGAGGACGATCAAGCTACAGTCTTGGCGGCTCCAAGACGGGGAGAGAGACATGTTGGTCGT
GGCTTAGATCGAGGGCGAGGCCGAGGAAGAGGCTACCATAATCTCCAACGGAGAGCTCCACGGGAGGATGCTCAAAAGGATACTAGTCGACCAGTTCTCGGACATAAAGG
AAAACCGATCGAAGTTCTAGATCAACAGGGTGACGAGATCCGACCAGATGACGGACAGAGGGATACTGGCCAACCAGTTCTTGGTCTGAAAGACAAACCGATCGAAGGTC
CGGATCAACAAGGTGACAAGATGGCCGCCTTAGAAGAGAGGGTAGAGGGAATGGACTGGAGCATGTCCCTACTTCTGCAAAAACTCGAGCAACATGAGGTGGAACAACCA
GTGCTTGTTCGCGATCCACGAAAGGGTAAAGCTTCGATGATTGAAGGAGTTGGGGAGACAACCAGTCATGCACGGACCAAGTTGAAGGTAGGAGGAAACGACAAACCTCG
AGCTAACGTCCTCGGCCAGACAGGCCGACAAGCAGTTGTACGACAATAG
Protein sequenceShow/hide protein sequence
MKVQRQRDVNNRDNDDDGAGIGMSNPEDNTIPDVRRREALEGTMERLIHGMEALTERIGRLEAQNQAPERIPPPRVLDEDDYEGDGSDHWEDDQATVLAAPRRGERHVGR
GLDRGRGRGRGYHNLQRRAPREDAQKDTSRPVLGHKGKPIEVLDQQGDEIRPDDGQRDTGQPVLGLKDKPIEGPDQQGDKMAALEERVEGMDWSMSLLLQKLEQHEVEQP
VLVRDPRKGKASMIEGVGETTSHARTKLKVGGNDKPRANVLGQTGRQAVVRQ