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Moc02g18230 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc02g18230
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr2:13633615..13634034
RNA-Seq ExpressionMoc02g18230
SyntenyMoc02g18230
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022155867.1 uncharacterized protein LOC111022881 [Momordica charantia]2.0e-2071.62Show/hide
Query:  IEDDIFKLKPMLFHMLQIVGSFHGLSSEDPHRHLQYFMQVASSFKLEGETKEAMSSKLLPYSSRDGAGAWFDLL
        +E D FKLKP +F MLQ VG FHGLSSEDPHRHLQYFMQVA SFKLEG +K A+   L PYS RD AGAW D L
Subjt:  IEDDIFKLKPMLFHMLQIVGSFHGLSSEDPHRHLQYFMQVASSFKLEGETKEAMSSKLLPYSSRDGAGAWFDLL

XP_022158490.1 uncharacterized protein LOC111024970 [Momordica charantia]3.7e-1949.06Show/hide
Query:  PLNVVLLADDMEQQIREYATPTFYDFNLVIADAYIEDDIFKLKPMLFHMLQIVGSFHGLSSEDPHRHLQYFMQVASSFKLEGETKEAMSSKLLPYSSRDG
        PLNV+LL DD E+ IR YA P  + F+ VIA   IE + F+LK ++F MLQ VG F G  SEDPH HL+YF++V+ SF ++  +KEA+  KL PY   D 
Subjt:  PLNVVLLADDMEQQIREYATPTFYDFNLVIADAYIEDDIFKLKPMLFHMLQIVGSFHGLSSEDPHRHLQYFMQVASSFKLEGETKEAMSSKLLPYSSRDG

Query:  AGAWFD
           W +
Subjt:  AGAWFD

XP_022158768.1 uncharacterized protein LOC111025234 [Momordica charantia]2.2e-2451.43Show/hide
Query:  MANPYNPKDQ---RVKHVLKDAARRPVLVHPLNVVLLADDMEQQIREYATPTFYDFNLVIADAYIEDDIFKLKPMLFHMLQIVGSFHGLSSEDPHRHLQY
        M +P NP  Q   +V+ V  D A    L  PLN +LL DD+EQ+IR YA P F+DFN VI D  IE D F+LKP +F MLQI   FHGL+SEDP+RHLQY
Subjt:  MANPYNPKDQ---RVKHVLKDAARRPVLVHPLNVVLLADDMEQQIREYATPTFYDFNLVIADAYIEDDIFKLKPMLFHMLQIVGSFHGLSSEDPHRHLQY

Query:  FMQVASSFKLEGETKEAMSSKLLPYSSRDGAGAWFDLLQQ
        FMQVA+S K+E    +A S+K L       A   FD+L++
Subjt:  FMQVASSFKLEGETKEAMSSKLLPYSSRDGAGAWFDLLQQ

XP_030478162.1 uncharacterized protein LOC115695219 [Cannabis sativa]7.4e-2050Show/hide
Query:  NVVLLADDMEQQIREYATPTFYDFNLVIADAYIEDDIFKLKPMLFHMLQIVGSFHGLSSEDPHRHLQYFMQVASSFKLEGETKEAMSSKLLPYSSRDGAG
        N + LADD  Q IREYA P F + NL I    I+   F+LKP++F MLQ VG F G  +EDPH H+  F++V+ SFKL+G ++EA+  KL P+S RD A 
Subjt:  NVVLLADDMEQQIREYATPTFYDFNLVIADAYIEDDIFKLKPMLFHMLQIVGSFHGLSSEDPHRHLQYFMQVASSFKLEGETKEAMSSKLLPYSSRDGAG

Query:  AWFDLL
        AW + L
Subjt:  AWFDLL

XP_030483210.1 uncharacterized protein LOC115699807 [Cannabis sativa]1.7e-1950.98Show/hide
Query:  LADDMEQQIREYATPTFYDFNLVIADAYIEDDIFKLKPMLFHMLQIVGSFHGLSSEDPHRHLQYFMQVASSFKLEGETKEAMSSKLLPYSSRDGAGAWFD
        +ADD +Q IR+YA P F + N  I    I+   F+LKP++F MLQ VG F G+ +EDPH HL+ FM+V+ SFKL G T++A+  KL PYS RD A AW +
Subjt:  LADDMEQQIREYATPTFYDFNLVIADAYIEDDIFKLKPMLFHMLQIVGSFHGLSSEDPHRHLQYFMQVASSFKLEGETKEAMSSKLLPYSSRDGAGAWFD

Query:  LL
         L
Subjt:  LL

TrEMBL top hitse value%identityAlignment
A0A6J1DQJ0 uncharacterized protein LOC1110228819.5e-2171.62Show/hide
Query:  IEDDIFKLKPMLFHMLQIVGSFHGLSSEDPHRHLQYFMQVASSFKLEGETKEAMSSKLLPYSSRDGAGAWFDLL
        +E D FKLKP +F MLQ VG FHGLSSEDPHRHLQYFMQVA SFKLEG +K A+   L PYS RD AGAW D L
Subjt:  IEDDIFKLKPMLFHMLQIVGSFHGLSSEDPHRHLQYFMQVASSFKLEGETKEAMSSKLLPYSSRDGAGAWFDLL

A0A6J1DVZ9 uncharacterized protein LOC1110249701.8e-1949.06Show/hide
Query:  PLNVVLLADDMEQQIREYATPTFYDFNLVIADAYIEDDIFKLKPMLFHMLQIVGSFHGLSSEDPHRHLQYFMQVASSFKLEGETKEAMSSKLLPYSSRDG
        PLNV+LL DD E+ IR YA P  + F+ VIA   IE + F+LK ++F MLQ VG F G  SEDPH HL+YF++V+ SF ++  +KEA+  KL PY   D 
Subjt:  PLNVVLLADDMEQQIREYATPTFYDFNLVIADAYIEDDIFKLKPMLFHMLQIVGSFHGLSSEDPHRHLQYFMQVASSFKLEGETKEAMSSKLLPYSSRDG

Query:  AGAWFD
           W +
Subjt:  AGAWFD

A0A6J1DX14 uncharacterized protein LOC1110252341.1e-2451.43Show/hide
Query:  MANPYNPKDQ---RVKHVLKDAARRPVLVHPLNVVLLADDMEQQIREYATPTFYDFNLVIADAYIEDDIFKLKPMLFHMLQIVGSFHGLSSEDPHRHLQY
        M +P NP  Q   +V+ V  D A    L  PLN +LL DD+EQ+IR YA P F+DFN VI D  IE D F+LKP +F MLQI   FHGL+SEDP+RHLQY
Subjt:  MANPYNPKDQ---RVKHVLKDAARRPVLVHPLNVVLLADDMEQQIREYATPTFYDFNLVIADAYIEDDIFKLKPMLFHMLQIVGSFHGLSSEDPHRHLQY

Query:  FMQVASSFKLEGETKEAMSSKLLPYSSRDGAGAWFDLLQQ
        FMQVA+S K+E    +A S+K L       A   FD+L++
Subjt:  FMQVASSFKLEGETKEAMSSKLLPYSSRDGAGAWFDLLQQ

U5CUI2 Retrotrans_gag domain-containing protein3.0e-1945.79Show/hide
Query:  LNVVLLADDMEQQIREYATPTFYDFNLVIADAYIEDDIFKLKPMLFHMLQIVGSFHGLSSEDPHRHLQYFMQVASSFKLEGETKEAMSSKLLPYSSRDGA
        +N ++LADD  + IREYA P F + N  I    I+   F+LKP++F MLQ VG F G+ +EDPH HL+ F++V+ SFK++G ++E +  KL P+S RD A
Subjt:  LNVVLLADDMEQQIREYATPTFYDFNLVIADAYIEDDIFKLKPMLFHMLQIVGSFHGLSSEDPHRHLQYFMQVASSFKLEGETKEAMSSKLLPYSSRDGA

Query:  GAWFDLL
         +W + L
Subjt:  GAWFDLL

U5CUK7 Uncharacterized protein3.0e-1948.11Show/hide
Query:  NVVLLADDMEQQIREYATPTFYDFNLVIADAYIEDDIFKLKPMLFHMLQIVGSFHGLSSEDPHRHLQYFMQVASSFKLEGETKEAMSSKLLPYSSRDGAG
        N + LADD  + IREYA P F + N  I    I+   F+LKP++F MLQ VG F G  +EDPH H++ F++V+ SFKL+G ++EA+  KL P+S RD A 
Subjt:  NVVLLADDMEQQIREYATPTFYDFNLVIADAYIEDDIFKLKPMLFHMLQIVGSFHGLSSEDPHRHLQYFMQVASSFKLEGETKEAMSSKLLPYSSRDGAG

Query:  AWFDLL
        AW + L
Subjt:  AWFDLL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAACCCATATAATCCAAAAGATCAGAGAGTTAAGCACGTACTAAAGGATGCAGCTAGGAGACCTGTTCTAGTACATCCTCTAAATGTTGTTTTATTAGCC
GATGATATGGAGCAGCAAATAAGAGAGTATGCAACCCCAACATTCTATGACTTCAACCTAGTAATTGCAGACGCCTATATTGAAGACGATATATTTAAGCTGAAA
CCAATGTTATTTCATATGCTCCAAATCGTAGGCTCATTTCATGGACTTTCATCTGAAGATCCACATCGCCATCTACAATATTTTATGCAAGTGGCTAGTTCGTTC
AAATTGGAAGGCGAGACTAAAGAAGCTATGAGCTCAAAATTGTTGCCATACTCCTCGAGGGATGGAGCAGGAGCATGGTTTGACCTGTTACAGCAAAATCTATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCAACCCATATAATCCAAAAGATCAGAGAGTTAAGCACGTACTAAAGGATGCAGCTAGGAGACCTGTTCTAGTACATCCTCTAAATGTTGTTTTATTAGCC
GATGATATGGAGCAGCAAATAAGAGAGTATGCAACCCCAACATTCTATGACTTCAACCTAGTAATTGCAGACGCCTATATTGAAGACGATATATTTAAGCTGAAA
CCAATGTTATTTCATATGCTCCAAATCGTAGGCTCATTTCATGGACTTTCATCTGAAGATCCACATCGCCATCTACAATATTTTATGCAAGTGGCTAGTTCGTTC
AAATTGGAAGGCGAGACTAAAGAAGCTATGAGCTCAAAATTGTTGCCATACTCCTCGAGGGATGGAGCAGGAGCATGGTTTGACCTGTTACAGCAAAATCTATGA
Protein sequenceShow/hide protein sequence
MANPYNPKDQRVKHVLKDAARRPVLVHPLNVVLLADDMEQQIREYATPTFYDFNLVIADAYIEDDIFKLKPMLFHMLQIVGSFHGLSSEDPHRHLQYFMQVASSF
KLEGETKEAMSSKLLPYSSRDGAGAWFDLLQQNL