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Moc02g18560 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc02g18560
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H-like domain containing protein
Genome locationchr2:13845149..13845598
RNA-Seq ExpressionMoc02g18560
SyntenyMoc02g18560
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_021748164.1 uncharacterized protein LOC110714013 [Chenopodium quinoa]1.2e-0539.39Show/hide
Query:  VGERRISMGAVIRDKDGEVYLTFLQCKRGSFTVDEAEAMAIKDSLRLVTEMGFTDLLIKTDSLIVF
        V ++ + +G V+RD+ G+V L    C +G+F VD  EA+A++  LR+V E GF +++I+TD++ +F
Subjt:  VGERRISMGAVIRDKDGEVYLTFLQCKRGSFTVDEAEAMAIKDSLRLVTEMGFTDLLIKTDSLIVF
XP_021750224.1 uncharacterized protein LOC110715912 [Chenopodium quinoa]6.7e-0435.94Show/hide
Query:  ERRISMGAVIRDKDGEVYLTFLQCKRGSFTVDEAEAMAIKDSLRLVTEMGFTDLLIKTDSLIVF
        ++ + +G V+RD DG V + +    RGS+ VD  EA+A++ SL +  E+GF + +++TD++ +F
Subjt:  ERRISMGAVIRDKDGEVYLTFLQCKRGSFTVDEAEAMAIKDSLRLVTEMGFTDLLIKTDSLIVF
TrEMBL top hitse value%identityAlignment
A0A2P5B751 Ribonuclease H-like domain containing protein5.5e-0434.94Show/hide
Query:  DAAIRVGERRISMGAVIRDKDGEVYLTFLQCKRGSFTVDEAEAMAIKDSLRLVTEMGFTDLLIKTDSLIVFSLVIQIRKIAIN
        DA++R GE RI +G VIRD  G V   F +   G F+VD+AE +A+++    V + G    +++ DSL     +     +A N
Subjt:  DAAIRVGERRISMGAVIRDKDGEVYLTFLQCKRGSFTVDEAEAMAIKDSLRLVTEMGFTDLLIKTDSLIVFSLVIQIRKIAIN
A0A803MB59 Uncharacterized protein3.2e-0437.5Show/hide
Query:  DAAIRVGERRISMGAVIRDKDGEVYLTFLQCKRGSFTVDEAEAMAIKDSLRLVTEMGFTDLLIKTDSLIVFS
        DAAI  G   + +G ++RDK G+V  +   C RG + VD AEA+A++ +L +  ++GF  + ++TD L + S
Subjt:  DAAIRVGERRISMGAVIRDKDGEVYLTFLQCKRGSFTVDEAEAMAIKDSLRLVTEMGFTDLLIKTDSLIVFS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTGGGCAGTCTGAATACAGTCTACCGAAAGAAGATGCAGCAATTAGAGTAGGGGAGAGACGAATTAGCATGGGAGCAGTGATTAGGGACAAAGATGGTGAAGTTTA
TCTGACCTTTTTGCAGTGTAAGCGTGGTTCGTTCACTGTTGATGAGGCTGAGGCTATGGCAATCAAAGACAGCTTGAGACTGGTGACTGAGATGGGGTTCACTGACTTGC
TCATTAAGACCGATTCCCTTATTGTTTTCTCCCTGGTCATTCAAATAAGGAAGATCGCTATCAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGTGTGGGCAGTCTGAATACAGTCTACCGAAAGAAGATGCAGCAATTAGAGTAGGGGAGAGACGAATTAGCATGGGAGCAGTGATTAGGGACAAAGATGGTGAAGTTTA
TCTGACCTTTTTGCAGTGTAAGCGTGGTTCGTTCACTGTTGATGAGGCTGAGGCTATGGCAATCAAAGACAGCTTGAGACTGGTGACTGAGATGGGGTTCACTGACTTGC
TCATTAAGACCGATTCCCTTATTGTTTTCTCCCTGGTCATTCAAATAAGGAAGATCGCTATCAATTAG
Protein sequenceShow/hide protein sequence
MCGQSEYSLPKEDAAIRVGERRISMGAVIRDKDGEVYLTFLQCKRGSFTVDEAEAMAIKDSLRLVTEMGFTDLLIKTDSLIVFSLVIQIRKIAIN