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Moc02g18690 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc02g18690
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr2:13919626..13920138
RNA-Seq ExpressionMoc02g18690
SyntenyMoc02g18690
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022150035.1 uncharacterized protein LOC111018307 [Momordica charantia]2.7e-4076.07Show/hide
Query:  FQELGQSIRDPVCRGRCRSRPVAYLLTIKQRTAESLHDYVARFNEEKLQVEGLTDDVSLLAFMSGVRDEHLSFSFEKKTPSTFSEALSRAQRYMSTGEFF
        F+ L ++       GR RSRPVAYLLTIKQR  ESLHDYVARFNEEKLQVEGLT+ VSL+AFMS +RDEHLSFSF KKTPSTFSEALSRAQ+YMS GEFF
Subjt:  FQELGQSIRDPVCRGRCRSRPVAYLLTIKQRTAESLHDYVARFNEEKLQVEGLTDDVSLLAFMSGVRDEHLSFSFEKKTPSTFSEALSRAQRYMSTGEFF

Query:  YSKREPDGKRTDQKRER
        +SKREP+GK++DQ RER
Subjt:  YSKREPDGKRTDQKRER

XP_022150104.1 uncharacterized protein LOC111018365 [Momordica charantia]5.9e-3592.05Show/hide
Query:  QRTAESLHDYVARFNEEKLQVEGLTDDVSLLAFMSGVRDEHLSFSFEKKTPSTFSEALSRAQRYMSTGEFFYSKREPDGKRTDQKRER
        QRT ESLH+YVARFNEEKLQVEGLTD VSLLAFMSGVRDEHLSFSF KKTPSTFSE LSRAQRYMS GEFFYSKREPD KRTDQKRER
Subjt:  QRTAESLHDYVARFNEEKLQVEGLTDDVSLLAFMSGVRDEHLSFSFEKKTPSTFSEALSRAQRYMSTGEFFYSKREPDGKRTDQKRER

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]3.1e-4482.91Show/hide
Query:  FQELGQSIRDPVCRGRCRSRPVAYLLTIKQRTAESLHDYVARFNEEKLQVEGLTDDVSLLAFMSGVRDEHLSFSFEKKTPSTFSEALSRAQRYMSTGEFF
        F+ L ++       GRCRSRPVAYLLTIKQRT ESL DYVARFNEEKLQVEGLTD VSLLAFMSGVRDEHLSFSF K+TP+TFSEALSRAQRYMS GEFF
Subjt:  FQELGQSIRDPVCRGRCRSRPVAYLLTIKQRTAESLHDYVARFNEEKLQVEGLTDDVSLLAFMSGVRDEHLSFSFEKKTPSTFSEALSRAQRYMSTGEFF

Query:  YSKREPDGKRTDQKRER
        YSKREPDGKRTD KRER
Subjt:  YSKREPDGKRTDQKRER

XP_022159109.1 uncharacterized protein LOC111025548 [Momordica charantia]9.6e-4684.62Show/hide
Query:  FQELGQSIRDPVCRGRCRSRPVAYLLTIKQRTAESLHDYVARFNEEKLQVEGLTDDVSLLAFMSGVRDEHLSFSFEKKTPSTFSEALSRAQRYMSTGEFF
        F+ L ++       GRCRSRPVAYLLTIKQRTAESLHDYVARFNEEKLQ+EGLTD VSLLAFMSGVRDEHLSFSFEK+TPSTFSEALSRAQRYMS  EF 
Subjt:  FQELGQSIRDPVCRGRCRSRPVAYLLTIKQRTAESLHDYVARFNEEKLQVEGLTDDVSLLAFMSGVRDEHLSFSFEKKTPSTFSEALSRAQRYMSTGEFF

Query:  YSKREPDGKRTDQKRER
        YSKREPDGKRTDQKRER
Subjt:  YSKREPDGKRTDQKRER

XP_022159368.1 uncharacterized protein LOC111025785 [Momordica charantia]1.4e-6081.29Show/hide
Query:  MDGYLRSVGGGQVPGILDYIKRVSQNMVSTIKARVNLEFQELGQSIRDPVCRGRCRSRPVAYLLTIKQRTAESLHDYVARFNEEKLQVEGLTDDVSLLAF
        MDGYLRSVG GQVPGILDYIK V QNMVSTIK      F+ L ++       GRCRSRPVAYLLTIKQRT ESLHDYVARFN+EKLQ+E LTD VSLLAF
Subjt:  MDGYLRSVGGGQVPGILDYIKRVSQNMVSTIKARVNLEFQELGQSIRDPVCRGRCRSRPVAYLLTIKQRTAESLHDYVARFNEEKLQVEGLTDDVSLLAF

Query:  MSGVRDEHLSFSFEKKTPSTFSEALSRAQRYMSTGEFFYSKREPDGKRTDQKRER
        MSGVRDEHLSFSF KKTPSTFSE LSRAQRYMS GEFFYSKREPDGKRTDQKRER
Subjt:  MSGVRDEHLSFSFEKKTPSTFSEALSRAQRYMSTGEFFYSKREPDGKRTDQKRER

TrEMBL top hitse value%identityAlignment
A0A6J1D7D2 uncharacterized protein LOC1110183071.3e-4076.07Show/hide
Query:  FQELGQSIRDPVCRGRCRSRPVAYLLTIKQRTAESLHDYVARFNEEKLQVEGLTDDVSLLAFMSGVRDEHLSFSFEKKTPSTFSEALSRAQRYMSTGEFF
        F+ L ++       GR RSRPVAYLLTIKQR  ESLHDYVARFNEEKLQVEGLT+ VSL+AFMS +RDEHLSFSF KKTPSTFSEALSRAQ+YMS GEFF
Subjt:  FQELGQSIRDPVCRGRCRSRPVAYLLTIKQRTAESLHDYVARFNEEKLQVEGLTDDVSLLAFMSGVRDEHLSFSFEKKTPSTFSEALSRAQRYMSTGEFF

Query:  YSKREPDGKRTDQKRER
        +SKREP+GK++DQ RER
Subjt:  YSKREPDGKRTDQKRER

A0A6J1D911 uncharacterized protein LOC1110183652.8e-3592.05Show/hide
Query:  QRTAESLHDYVARFNEEKLQVEGLTDDVSLLAFMSGVRDEHLSFSFEKKTPSTFSEALSRAQRYMSTGEFFYSKREPDGKRTDQKRER
        QRT ESLH+YVARFNEEKLQVEGLTD VSLLAFMSGVRDEHLSFSF KKTPSTFSE LSRAQRYMS GEFFYSKREPD KRTDQKRER
Subjt:  QRTAESLHDYVARFNEEKLQVEGLTDDVSLLAFMSGVRDEHLSFSFEKKTPSTFSEALSRAQRYMSTGEFFYSKREPDGKRTDQKRER

A0A6J1DWY0 uncharacterized protein LOC1110252931.5e-4482.91Show/hide
Query:  FQELGQSIRDPVCRGRCRSRPVAYLLTIKQRTAESLHDYVARFNEEKLQVEGLTDDVSLLAFMSGVRDEHLSFSFEKKTPSTFSEALSRAQRYMSTGEFF
        F+ L ++       GRCRSRPVAYLLTIKQRT ESL DYVARFNEEKLQVEGLTD VSLLAFMSGVRDEHLSFSF K+TP+TFSEALSRAQRYMS GEFF
Subjt:  FQELGQSIRDPVCRGRCRSRPVAYLLTIKQRTAESLHDYVARFNEEKLQVEGLTDDVSLLAFMSGVRDEHLSFSFEKKTPSTFSEALSRAQRYMSTGEFF

Query:  YSKREPDGKRTDQKRER
        YSKREPDGKRTD KRER
Subjt:  YSKREPDGKRTDQKRER

A0A6J1DYL6 uncharacterized protein LOC1110257856.7e-6181.29Show/hide
Query:  MDGYLRSVGGGQVPGILDYIKRVSQNMVSTIKARVNLEFQELGQSIRDPVCRGRCRSRPVAYLLTIKQRTAESLHDYVARFNEEKLQVEGLTDDVSLLAF
        MDGYLRSVG GQVPGILDYIK V QNMVSTIK      F+ L ++       GRCRSRPVAYLLTIKQRT ESLHDYVARFN+EKLQ+E LTD VSLLAF
Subjt:  MDGYLRSVGGGQVPGILDYIKRVSQNMVSTIKARVNLEFQELGQSIRDPVCRGRCRSRPVAYLLTIKQRTAESLHDYVARFNEEKLQVEGLTDDVSLLAF

Query:  MSGVRDEHLSFSFEKKTPSTFSEALSRAQRYMSTGEFFYSKREPDGKRTDQKRER
        MSGVRDEHLSFSF KKTPSTFSE LSRAQRYMS GEFFYSKREPDGKRTDQKRER
Subjt:  MSGVRDEHLSFSFEKKTPSTFSEALSRAQRYMSTGEFFYSKREPDGKRTDQKRER

A0A6J1E1E7 uncharacterized protein LOC1110255484.7e-4684.62Show/hide
Query:  FQELGQSIRDPVCRGRCRSRPVAYLLTIKQRTAESLHDYVARFNEEKLQVEGLTDDVSLLAFMSGVRDEHLSFSFEKKTPSTFSEALSRAQRYMSTGEFF
        F+ L ++       GRCRSRPVAYLLTIKQRTAESLHDYVARFNEEKLQ+EGLTD VSLLAFMSGVRDEHLSFSFEK+TPSTFSEALSRAQRYMS  EF 
Subjt:  FQELGQSIRDPVCRGRCRSRPVAYLLTIKQRTAESLHDYVARFNEEKLQVEGLTDDVSLLAFMSGVRDEHLSFSFEKKTPSTFSEALSRAQRYMSTGEFF

Query:  YSKREPDGKRTDQKRER
        YSKREPDGKRTDQKRER
Subjt:  YSKREPDGKRTDQKRER

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGGATATCTACGGAGTGTCGGAGGCGGTCAGGTGCCGGGTATTCTCGACTACATTAAACGGGTCAGCCAGAATATGGTTTCGACAATTAAAGCGAGGGTCAATCT
CGAGTTTCAAGAGCTTGGCCAGAGCATTCGTGACCCAGTTTGTAGGGGACGGTGTCGGAGCCGACCTGTGGCTTATCTTTTAACTATTAAACAGAGGACGGCAGAGAGTC
TACACGACTATGTAGCTCGGTTCAACGAGGAGAAGCTGCAGGTAGAAGGCCTTACAGACGATGTATCTCTGCTGGCCTTCATGTCCGGCGTCAGGGATGAGCATTTGTCA
TTTTCGTTCGAAAAGAAAACACCGAGTACCTTCTCGGAGGCGCTGAGCCGAGCTCAGAGGTACATGAGCACTGGTGAGTTCTTTTACTCAAAAAGGGAGCCAGACGGAAA
GCGAACCGACCAAAAGAGGGAGAGATTAAAGGAGAACAACGAGTGTCGCGGGAATGCTACTATACCTCAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGATGGATATCTACGGAGTGTCGGAGGCGGTCAGGTGCCGGGTATTCTCGACTACATTAAACGGGTCAGCCAGAATATGGTTTCGACAATTAAAGCGAGGGTCAATCT
CGAGTTTCAAGAGCTTGGCCAGAGCATTCGTGACCCAGTTTGTAGGGGACGGTGTCGGAGCCGACCTGTGGCTTATCTTTTAACTATTAAACAGAGGACGGCAGAGAGTC
TACACGACTATGTAGCTCGGTTCAACGAGGAGAAGCTGCAGGTAGAAGGCCTTACAGACGATGTATCTCTGCTGGCCTTCATGTCCGGCGTCAGGGATGAGCATTTGTCA
TTTTCGTTCGAAAAGAAAACACCGAGTACCTTCTCGGAGGCGCTGAGCCGAGCTCAGAGGTACATGAGCACTGGTGAGTTCTTTTACTCAAAAAGGGAGCCAGACGGAAA
GCGAACCGACCAAAAGAGGGAGAGATTAAAGGAGAACAACGAGTGTCGCGGGAATGCTACTATACCTCAATAA
Protein sequenceShow/hide protein sequence
MDGYLRSVGGGQVPGILDYIKRVSQNMVSTIKARVNLEFQELGQSIRDPVCRGRCRSRPVAYLLTIKQRTAESLHDYVARFNEEKLQVEGLTDDVSLLAFMSGVRDEHLS
FSFEKKTPSTFSEALSRAQRYMSTGEFFYSKREPDGKRTDQKRERLKENNECRGNATIPQ