; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc02g18910 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc02g18910
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionReverse transcriptase
Genome locationchr2:14094474..14096867
RNA-Seq ExpressionMoc02g18910
SyntenyMoc02g18910
Gene Ontology termsNA
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022142953.1 uncharacterized protein LOC111012947 [Momordica charantia]1.7e-7031.64Show/hide
Query:  AGINNPLPQAAQFQLKPVMFQIY--------------------------AFQLSGVSEDALRLKMFPFSLMDGARIWLNALEPNSVNTWAELTEKFLAKY
        + + N  P  A F+ KP+M Q+                            F+L G+S+DALRL +FPFSL   A  WLNA   +++ T +++ +KFL KY
Subjt:  AGINNPLPQAAQFQLKPVMFQIY--------------------------AFQLSGVSEDALRLKMFPFSLMDGARIWLNALEPNSVNTWAELTEKFLAKY

Query:  HTLTRNPDLREDIVSFRQKENEA-------------------------IEQFYKGLDHSSRMMLNTRANGSLLEKLVNEIVDILNKITDINDQG------
           TRN D+RE+I+SFRQKENEA                         IE F++  D  + MMLN  ANG    K  NEIV+IL+++++ NDQ       
Subjt:  HTLTRNPDLREDIVSFRQKENEA-------------------------IEQFYKGLDHSSRMMLNTRANGSLLEKLVNEIVDILNKITDINDQG------

Query:  -------------------------------------------------------------QGAQWNFNSYSNTYNPGWRHHPNFSWSNQGVASSSAQ--
                                                                     Q  Q  FN YSN YNPGW+ HPNFSWS QG +S + Q  
Subjt:  -------------------------------------------------------------QGAQWNFNSYSNTYNPGWRHHPNFSWSNQGVASSSAQ--

Query:  -------------APALP--PQQYNQQRAQNTTQQGGDNAS-FEAMMKEFMTRSEATTKEFMRRT-----------------NVAIRNLEMQVGQIANDQ
                     +PA P  PQQYNQQ+  N  Q    N S  E +MKEF+T+++AT KE M RT                 +V +RNLEMQ+GQ+AN+ 
Subjt:  -------------APALP--PQQYNQQRAQNTTQQGGDNAS-FEAMMKEFMTRSEATTKEFMRRT-----------------NVAIRNLEMQVGQIANDQ

Query:  KSKPQSTLPGHTENQKR-----------------------------------------------------------------------------------
        +++PQ +LP  TE  +R                                                                                   
Subjt:  KSKPQSTLPGHTENQKR-----------------------------------------------------------------------------------

Query:  --------KKLGEHETVALTKCSSDALGNPLPVKRKDP----------------------------------ELDIGEARPTTITLQLADRSIKKPEGKI
                KKLGE+ETVALT+CSS+   +  P K KDP                                  +L+IG+A PTT+TL LADRSI KPEGKI
Subjt:  --------KKLGEHETVALTKCSSDALGNPLPVKRKDP----------------------------------ELDIGEARPTTITLQLADRSIKKPEGKI

Query:  EDVLVKVDKFIFPADFIILDCEAD---------------------------LEVNDEQVTFNVLDEMRLSDEVEDYSTI----GAIMEELQEMIVEDLEG
        EDVLVKVDKFIFPADFIILDCEAD                           + V+D++VTFN+LD M+  D+ E+   I    G    EL +++  ++E 
Subjt:  EDVLVKVDKFIFPADFIILDCEAD---------------------------LEVNDEQVTFNVLDEMRLSDEVEDYSTI----GAIMEELQEMIVEDLEG

Query:  DLEAAEKE
        +LE AEKE
Subjt:  DLEAAEKE

XP_022158314.1 uncharacterized protein LOC111024824 [Momordica charantia]4.5e-6040.48Show/hide
Query:  MNRNPQDPPPPQNPPVNGDMAG---------INNPL-----------------------------------PQAAQFQLKPVMFQIYAFQLSGVSEDALR
        MN NPQDPP P NPPV+GD AG         + NP+                                    +     LK  +    AFQLSGVSEDALR
Subjt:  MNRNPQDPPPPQNPPVNGDMAG---------INNPL-----------------------------------PQAAQFQLKPVMFQIYAFQLSGVSEDALR

Query:  LKMFPFSLMDGARIWLNALEPNSVNTWAELTEKFLAKYHTLTRNPDLREDIVSFRQKENEA-------------------------IEQFYKGLDHSSRM
        LKM                                        N DLREDIVSFRQKENEA                         IEQFY+GLD  SRM
Subjt:  LKMFPFSLMDGARIWLNALEPNSVNTWAELTEKFLAKYHTLTRNPDLREDIVSFRQKENEA-------------------------IEQFYKGLDHSSRM

Query:  MLNTRANGSLLEKLVNEIVDILNKITDINDQ---------------------------------------------------------------------
        MLNT AN SL EK ++EI+DILNK+TD NDQ                                                                     
Subjt:  MLNTRANGSLLEKLVNEIVDILNKITDINDQ---------------------------------------------------------------------

Query:  -------------------GQGAQWNFNSYSNTYNPGWRHHPNFSWSNQGVASSSAQA-----------------PALPPQQYNQQRAQNTTQQGGDNAS
                           GQ AQ NFN YSNTY+P WR+HPNFSWSNQGVASSSAQ                  PA  PQQYNQQRAQNTTQQGG N S
Subjt:  -------------------GQGAQWNFNSYSNTYNPGWRHHPNFSWSNQGVASSSAQA-----------------PALPPQQYNQQRAQNTTQQGGDNAS

Query:  FEAMMKEFMTRSEATTKEFMRRTNVAIRNLEMQVGQIANDQKSKPQSTLPGHTENQK
         EAM KEFMTRSEATTKEFM RT+  IR LEMQVGQIAND+KS+PQ TLPG+TEN K
Subjt:  FEAMMKEFMTRSEATTKEFMRRTNVAIRNLEMQVGQIANDQKSKPQSTLPGHTENQK

XP_022158836.1 uncharacterized protein LOC111025302 [Momordica charantia]3.8e-7550.41Show/hide
Query:  MNRNPQDPPPPQNPPVNGDMA--------------------------------------GINNPLPQAAQFQLKPVMFQIY-------------------
        MNRN QDPPPPQNPPVNGDMA                                      GINNPLPQAAQF+LKPVMFQI                    
Subjt:  MNRNPQDPPPPQNPPVNGDMA--------------------------------------GINNPLPQAAQFQLKPVMFQIY-------------------

Query:  -------AFQLSGVSEDALRLKMFPFSLMDGARIWLNALEPNSVNTWAELTEKFLAKYHTLTRNPDLREDIVSFRQKENEA-------------------
               AFQL G SEDALRLKMFPFSL DGAR W+NALEPNS+NTWAELT+KFLAKYHTLT+N DLREDIVSFRQKENEA                   
Subjt:  -------AFQLSGVSEDALRLKMFPFSLMDGARIWLNALEPNSVNTWAELTEKFLAKYHTLTRNPDLREDIVSFRQKENEA-------------------

Query:  ------IEQFYKGLDHSSRMMLNTRANGSLLEKLVNEIVDILNKITDINDQ-------------------------------------------------
              IEQFY+GLD SS+MMLNT ANGSLLEK VNEIVD+LNK+TDINDQ                                                 
Subjt:  ------IEQFYKGLDHSSRMMLNTRANGSLLEKLVNEIVDILNKITDINDQ-------------------------------------------------

Query:  --------------------GQGAQWNFNSYSNTYNPGWRHHPNFSWSNQGVASSSAQAPALPPQQY
                            GQGAQ NFN YSNTYNPGWRHHPNFSWSNQGVASSSAQAPA   QQY
Subjt:  --------------------GQGAQWNFNSYSNTYNPGWRHHPNFSWSNQGVASSSAQAPALPPQQY

XP_022159235.1 uncharacterized protein LOC111025653 [Momordica charantia]8.0e-6528.87Show/hide
Query:  AGINNPLPQAAQFQLKPVMFQIY--------------------------AFQLSGVSEDALRLKMFPFSLMDGARIWLNALEPNSVNTWAELTEKFLAKY
        + + N  P  A+F+ KP+M Q+                            F+L G+S+DALRL +FPFS+   A  WLNA   +++ TW+++ +KFL KY
Subjt:  AGINNPLPQAAQFQLKPVMFQIY--------------------------AFQLSGVSEDALRLKMFPFSLMDGARIWLNALEPNSVNTWAELTEKFLAKY

Query:  HTLTRNPDLREDIVSFRQKENEA-------------------------IEQFYKGLDHSSRMMLNTRANGSLLEKLVNEIVDILNKITDINDQ-------
           TRN D+RE+I+SFRQKENEA                         IE F++G D  ++MMLN  ANG    K  NEIV+IL+++++ N Q       
Subjt:  HTLTRNPDLREDIVSFRQKENEA-------------------------IEQFYKGLDHSSRMMLNTRANGSLLEKLVNEIVDILNKITDINDQ-------

Query:  -----------------------------------------------------------------------------------GQGAQWNFNSYSNTYNP
                                                                                           GQ  Q  FN YSNTYNP
Subjt:  -----------------------------------------------------------------------------------GQGAQWNFNSYSNTYNP

Query:  GWRHHPNFSWSNQGVASSSA---------------QAPALP--PQQYNQQRAQNTTQQGGDNAS-FEAMMKEFMTRSEATTKEFMRRT------------
        GW+ HPNFSWS QG ++++                 +PA P  P QYNQQ+  N  Q    N S  E +MKE +T+++AT KE M RT            
Subjt:  GWRHHPNFSWSNQGVASSSA---------------QAPALP--PQQYNQQRAQNTTQQGGDNAS-FEAMMKEFMTRSEATTKEFMRRT------------

Query:  -----NVAIRNLEMQVGQIANDQKSKPQSTLPGHTENQKR------------------------------------------------------------
             +V +R LEMQ+GQ+ N+ +++PQ +LP  TE  +R                                                            
Subjt:  -----NVAIRNLEMQVGQIANDQKSKPQSTLPGHTENQKR------------------------------------------------------------

Query:  -------------------------------------------------------KKLGEHETVALTKCSSDALGNPLPVKRKDP---------------
                                                               KKLGE+ETVALT+CSS+   + +P K KDP               
Subjt:  -------------------------------------------------------KKLGEHETVALTKCSSDALGNPLPVKRKDP---------------

Query:  -------------------ELDIGEARPTTITLQLADRSIKKPEGKIEDVLVKVDKFIFPADFIILDCEAD---------------------------LE
                           + +IG+A PTT+TLQLADRSI KPEGKIEDVLVKVDKFIFP DFIILDCEAD                           + 
Subjt:  -------------------ELDIGEARPTTITLQLADRSIKKPEGKIEDVLVKVDKFIFPADFIILDCEAD---------------------------LE

Query:  VNDEQVTFNVLDEMRLSDEVEDYSTIG----AIMEELQEMIVEDLEGDLEAAEKE
        V+D++VTFN+LD M+  D++E+ + I         EL +++  ++E +LE AEKE
Subjt:  VNDEQVTFNVLDEMRLSDEVEDYSTIG----AIMEELQEMIVEDLEGDLEAAEKE

XP_024949903.1 uncharacterized protein LOC112496715 [Citrus sinensis]2.5e-5028.66Show/hide
Query:  GINNPLPQAAQFQLKPVMFQIY--------------------------AFQLSGVSEDALRLKMFPFSLMDGARIWLNALEPNSVNTWAELTEKFLAKYH
        GI  P  QA  F+LKPVMFQ+                           AF+++G S++ALRL++F FSL D AR WLN+L P+S+ TW++L +KFL KY 
Subjt:  GINNPLPQAAQFQLKPVMFQIY--------------------------AFQLSGVSEDALRLKMFPFSLMDGARIWLNALEPNSVNTWAELTEKFLAKYH

Query:  TLTRNPDLREDIVSFRQKENEA-------------------------IEQFYKGLDHSSRMMLNTRANGSLLEKLVNEIVDILNKITDINDQ--------
          T+N  LR +I SF Q E+E+                         +E  Y GL+ S+R++++  ANG+LL K  NE  +IL +I + N Q        
Subjt:  TLTRNPDLREDIVSFRQKENEA-------------------------IEQFYKGLDHSSRMMLNTRANGSLLEKLVNEIVDILNKITDINDQ--------

Query:  ------------------------------------------------GQGAQW--------------NF------NSYSNTYNPGWRHHPNFSWSNQG-
                                                        G+G  +              NF      N YSNTYN GWR H NFSW+NQ  
Subjt:  ------------------------------------------------GQGAQW--------------NF------NSYSNTYNPGWRHHPNFSWSNQG-

Query:  --VASSSAQAPALPPQQYNQQRAQNTTQQGGDNASFEAMMKEFMTRSEATTKEFMRRTNVAIRNLEMQVGQIANDQKSKPQSTLPGHTEN----------
          VA S    PA PP  Y QQ  +  +      +S E ++K+++ R+EA  +       V++RNLE Q+GQ+A    ++PQ +LP +TEN          
Subjt:  --VASSSAQAPALPPQQYNQQRAQNTTQQGGDNASFEAMMKEFMTRSEATTKEFMRRTNVAIRNLEMQVGQIANDQKSKPQSTLPGHTEN----------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ---------------------------QKRKKLGEHETVALTKCSSDALGNPLPVKRKDPELDIGEARPTTITLQLADRSIKKPEGKIEDVLVKVDKFIF
                                    K+++L E ETVA+T+ SS  L + +P K KDP        PTT++LQLADRS   PEG+I+DVLVKVDKFIF
Subjt:  ---------------------------QKRKKLGEHETVALTKCSSDALGNPLPVKRKDPELDIGEARPTTITLQLADRSIKKPEGKIEDVLVKVDKFIF

Query:  PADFIILDCEADLE---------------------------VNDEQVTFNVLDEMRLSDEVEDYSTIGAI
        P DFI+LD EAD E                           VND+QVTFNVLD M+  DE+ED + I  +
Subjt:  PADFIILDCEADLE---------------------------VNDEQVTFNVLDEMRLSDEVEDYSTIGAI

TrEMBL top hitse value%identityAlignment
A0A6J1CPJ3 uncharacterized protein LOC1110129471.8e-7031.64Show/hide
Query:  AGINNPLPQAAQFQLKPVMFQIY--------------------------AFQLSGVSEDALRLKMFPFSLMDGARIWLNALEPNSVNTWAELTEKFLAKY
        + + N  P  A F+ KP+M Q+                            F+L G+S+DALRL +FPFSL   A  WLNA   +++ T +++ +KFL KY
Subjt:  AGINNPLPQAAQFQLKPVMFQIY--------------------------AFQLSGVSEDALRLKMFPFSLMDGARIWLNALEPNSVNTWAELTEKFLAKY

Query:  HTLTRNPDLREDIVSFRQKENEA-------------------------IEQFYKGLDHSSRMMLNTRANGSLLEKLVNEIVDILNKITDINDQG------
           TRN D+RE+I+SFRQKENEA                         IE F++  D  + MMLN  ANG    K  NEIV+IL+++++ NDQ       
Subjt:  HTLTRNPDLREDIVSFRQKENEA-------------------------IEQFYKGLDHSSRMMLNTRANGSLLEKLVNEIVDILNKITDINDQG------

Query:  -------------------------------------------------------------QGAQWNFNSYSNTYNPGWRHHPNFSWSNQGVASSSAQ--
                                                                     Q  Q  FN YSN YNPGW+ HPNFSWS QG +S + Q  
Subjt:  -------------------------------------------------------------QGAQWNFNSYSNTYNPGWRHHPNFSWSNQGVASSSAQ--

Query:  -------------APALP--PQQYNQQRAQNTTQQGGDNAS-FEAMMKEFMTRSEATTKEFMRRT-----------------NVAIRNLEMQVGQIANDQ
                     +PA P  PQQYNQQ+  N  Q    N S  E +MKEF+T+++AT KE M RT                 +V +RNLEMQ+GQ+AN+ 
Subjt:  -------------APALP--PQQYNQQRAQNTTQQGGDNAS-FEAMMKEFMTRSEATTKEFMRRT-----------------NVAIRNLEMQVGQIANDQ

Query:  KSKPQSTLPGHTENQKR-----------------------------------------------------------------------------------
        +++PQ +LP  TE  +R                                                                                   
Subjt:  KSKPQSTLPGHTENQKR-----------------------------------------------------------------------------------

Query:  --------KKLGEHETVALTKCSSDALGNPLPVKRKDP----------------------------------ELDIGEARPTTITLQLADRSIKKPEGKI
                KKLGE+ETVALT+CSS+   +  P K KDP                                  +L+IG+A PTT+TL LADRSI KPEGKI
Subjt:  --------KKLGEHETVALTKCSSDALGNPLPVKRKDP----------------------------------ELDIGEARPTTITLQLADRSIKKPEGKI

Query:  EDVLVKVDKFIFPADFIILDCEAD---------------------------LEVNDEQVTFNVLDEMRLSDEVEDYSTI----GAIMEELQEMIVEDLEG
        EDVLVKVDKFIFPADFIILDCEAD                           + V+D++VTFN+LD M+  D+ E+   I    G    EL +++  ++E 
Subjt:  EDVLVKVDKFIFPADFIILDCEAD---------------------------LEVNDEQVTFNVLDEMRLSDEVEDYSTI----GAIMEELQEMIVEDLEG

Query:  DLEAAEKE
        +LE AEKE
Subjt:  DLEAAEKE

A0A6J1DY39 uncharacterized protein LOC1110256533.9e-6528.87Show/hide
Query:  AGINNPLPQAAQFQLKPVMFQIY--------------------------AFQLSGVSEDALRLKMFPFSLMDGARIWLNALEPNSVNTWAELTEKFLAKY
        + + N  P  A+F+ KP+M Q+                            F+L G+S+DALRL +FPFS+   A  WLNA   +++ TW+++ +KFL KY
Subjt:  AGINNPLPQAAQFQLKPVMFQIY--------------------------AFQLSGVSEDALRLKMFPFSLMDGARIWLNALEPNSVNTWAELTEKFLAKY

Query:  HTLTRNPDLREDIVSFRQKENEA-------------------------IEQFYKGLDHSSRMMLNTRANGSLLEKLVNEIVDILNKITDINDQ-------
           TRN D+RE+I+SFRQKENEA                         IE F++G D  ++MMLN  ANG    K  NEIV+IL+++++ N Q       
Subjt:  HTLTRNPDLREDIVSFRQKENEA-------------------------IEQFYKGLDHSSRMMLNTRANGSLLEKLVNEIVDILNKITDINDQ-------

Query:  -----------------------------------------------------------------------------------GQGAQWNFNSYSNTYNP
                                                                                           GQ  Q  FN YSNTYNP
Subjt:  -----------------------------------------------------------------------------------GQGAQWNFNSYSNTYNP

Query:  GWRHHPNFSWSNQGVASSSA---------------QAPALP--PQQYNQQRAQNTTQQGGDNAS-FEAMMKEFMTRSEATTKEFMRRT------------
        GW+ HPNFSWS QG ++++                 +PA P  P QYNQQ+  N  Q    N S  E +MKE +T+++AT KE M RT            
Subjt:  GWRHHPNFSWSNQGVASSSA---------------QAPALP--PQQYNQQRAQNTTQQGGDNAS-FEAMMKEFMTRSEATTKEFMRRT------------

Query:  -----NVAIRNLEMQVGQIANDQKSKPQSTLPGHTENQKR------------------------------------------------------------
             +V +R LEMQ+GQ+ N+ +++PQ +LP  TE  +R                                                            
Subjt:  -----NVAIRNLEMQVGQIANDQKSKPQSTLPGHTENQKR------------------------------------------------------------

Query:  -------------------------------------------------------KKLGEHETVALTKCSSDALGNPLPVKRKDP---------------
                                                               KKLGE+ETVALT+CSS+   + +P K KDP               
Subjt:  -------------------------------------------------------KKLGEHETVALTKCSSDALGNPLPVKRKDP---------------

Query:  -------------------ELDIGEARPTTITLQLADRSIKKPEGKIEDVLVKVDKFIFPADFIILDCEAD---------------------------LE
                           + +IG+A PTT+TLQLADRSI KPEGKIEDVLVKVDKFIFP DFIILDCEAD                           + 
Subjt:  -------------------ELDIGEARPTTITLQLADRSIKKPEGKIEDVLVKVDKFIFPADFIILDCEAD---------------------------LE

Query:  VNDEQVTFNVLDEMRLSDEVEDYSTIG----AIMEELQEMIVEDLEGDLEAAEKE
        V+D++VTFN+LD M+  D++E+ + I         EL +++  ++E +LE AEKE
Subjt:  VNDEQVTFNVLDEMRLSDEVEDYSTIG----AIMEELQEMIVEDLEGDLEAAEKE

A0A6J1DYY9 uncharacterized protein LOC1110255571.9e-4344.66Show/hide
Query:  AFQLSGVSEDALRLKMFPFSLMDGARIWLNALEPNSVNTWAELTEKFLAKYHTLTRNPDLREDIVSFRQKENEA-------------------------I
        AFQL GVSEDALRLKMFPFSL DGA  WLN LE N + TWAELT+KFLAKYHTLTRN DL+EDIVSFRQ+E+EA                         I
Subjt:  AFQLSGVSEDALRLKMFPFSLMDGARIWLNALEPNSVNTWAELTEKFLAKYHTLTRNPDLREDIVSFRQKENEA-------------------------I

Query:  EQFYKGLDHSSRMMLNTRANGSLLEKLVNEIVDILNKITDINDQ--------------------------------------------------------
        +QFY+GLDH  RMM +T AN SLLEK VNEI+DILNK+ DINDQ                                                        
Subjt:  EQFYKGLDHSSRMMLNTRANGSLLEKLVNEIVDILNKITDINDQ--------------------------------------------------------

Query:  ---------------------------------GQGAQWNFNSYSNTYNPGWRHHPNFSWSN
                                         GQG Q NFN YSNTYNPGWR HPNFS SN
Subjt:  ---------------------------------GQGAQWNFNSYSNTYNPGWRHHPNFSWSN

A0A6J1DZ19 uncharacterized protein LOC1110248242.2e-6040.48Show/hide
Query:  MNRNPQDPPPPQNPPVNGDMAG---------INNPL-----------------------------------PQAAQFQLKPVMFQIYAFQLSGVSEDALR
        MN NPQDPP P NPPV+GD AG         + NP+                                    +     LK  +    AFQLSGVSEDALR
Subjt:  MNRNPQDPPPPQNPPVNGDMAG---------INNPL-----------------------------------PQAAQFQLKPVMFQIYAFQLSGVSEDALR

Query:  LKMFPFSLMDGARIWLNALEPNSVNTWAELTEKFLAKYHTLTRNPDLREDIVSFRQKENEA-------------------------IEQFYKGLDHSSRM
        LKM                                        N DLREDIVSFRQKENEA                         IEQFY+GLD  SRM
Subjt:  LKMFPFSLMDGARIWLNALEPNSVNTWAELTEKFLAKYHTLTRNPDLREDIVSFRQKENEA-------------------------IEQFYKGLDHSSRM

Query:  MLNTRANGSLLEKLVNEIVDILNKITDINDQ---------------------------------------------------------------------
        MLNT AN SL EK ++EI+DILNK+TD NDQ                                                                     
Subjt:  MLNTRANGSLLEKLVNEIVDILNKITDINDQ---------------------------------------------------------------------

Query:  -------------------GQGAQWNFNSYSNTYNPGWRHHPNFSWSNQGVASSSAQA-----------------PALPPQQYNQQRAQNTTQQGGDNAS
                           GQ AQ NFN YSNTY+P WR+HPNFSWSNQGVASSSAQ                  PA  PQQYNQQRAQNTTQQGG N S
Subjt:  -------------------GQGAQWNFNSYSNTYNPGWRHHPNFSWSNQGVASSSAQA-----------------PALPPQQYNQQRAQNTTQQGGDNAS

Query:  FEAMMKEFMTRSEATTKEFMRRTNVAIRNLEMQVGQIANDQKSKPQSTLPGHTENQK
         EAM KEFMTRSEATTKEFM RT+  IR LEMQVGQIAND+KS+PQ TLPG+TEN K
Subjt:  FEAMMKEFMTRSEATTKEFMRRTNVAIRNLEMQVGQIANDQKSKPQSTLPGHTENQK

A0A6J1E251 uncharacterized protein LOC1110253021.9e-7550.41Show/hide
Query:  MNRNPQDPPPPQNPPVNGDMA--------------------------------------GINNPLPQAAQFQLKPVMFQIY-------------------
        MNRN QDPPPPQNPPVNGDMA                                      GINNPLPQAAQF+LKPVMFQI                    
Subjt:  MNRNPQDPPPPQNPPVNGDMA--------------------------------------GINNPLPQAAQFQLKPVMFQIY-------------------

Query:  -------AFQLSGVSEDALRLKMFPFSLMDGARIWLNALEPNSVNTWAELTEKFLAKYHTLTRNPDLREDIVSFRQKENEA-------------------
               AFQL G SEDALRLKMFPFSL DGAR W+NALEPNS+NTWAELT+KFLAKYHTLT+N DLREDIVSFRQKENEA                   
Subjt:  -------AFQLSGVSEDALRLKMFPFSLMDGARIWLNALEPNSVNTWAELTEKFLAKYHTLTRNPDLREDIVSFRQKENEA-------------------

Query:  ------IEQFYKGLDHSSRMMLNTRANGSLLEKLVNEIVDILNKITDINDQ-------------------------------------------------
              IEQFY+GLD SS+MMLNT ANGSLLEK VNEIVD+LNK+TDINDQ                                                 
Subjt:  ------IEQFYKGLDHSSRMMLNTRANGSLLEKLVNEIVDILNKITDINDQ-------------------------------------------------

Query:  --------------------GQGAQWNFNSYSNTYNPGWRHHPNFSWSNQGVASSSAQAPALPPQQY
                            GQGAQ NFN YSNTYNPGWRHHPNFSWSNQGVASSSAQAPA   QQY
Subjt:  --------------------GQGAQWNFNSYSNTYNPGWRHHPNFSWSNQGVASSSAQAPALPPQQY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATAGGAATCCACAAGATCCTCCACCTCCACAAAATCCACCTGTGAACGGAGATATGGCAGGGATAAATAATCCTTTACCCCAAGCCGCACAGTTCCAGCTCAAGCC
AGTCATGTTCCAGATCTATGCATTTCAACTTTCTGGTGTCTCTGAGGATGCACTAAGATTAAAAATGTTTCCTTTTTCTCTCATGGATGGTGCAAGGATTTGGCTAAACG
CGCTAGAACCAAATTCTGTCAACACGTGGGCAGAACTGACGGAGAAATTTTTGGCGAAGTACCACACTTTGACCAGGAACCCAGACCTTCGAGAAGACATTGTGTCTTTC
CGACAAAAGGAGAATGAAGCAATTGAGCAGTTCTATAAAGGATTAGATCATTCATCAAGAATGATGTTGAACACCAGAGCTAATGGTTCGTTGTTAGAAAAGTTGGTTAA
TGAGATCGTTGATATCTTAAACAAGATAACAGACATTAATGACCAAGGTCAAGGTGCCCAGTGGAATTTCAATTCATATTCAAACACTTACAACCCTGGATGGAGGCACC
ATCCAAACTTTTCTTGGAGTAATCAAGGAGTAGCTAGTAGCAGTGCGCAAGCACCCGCATTGCCGCCACAACAATACAATCAACAACGAGCTCAAAATACTACTCAACAA
GGTGGTGACAACGCAAGTTTTGAGGCCATGATGAAAGAATTCATGACAAGAAGTGAAGCTACAACAAAAGAGTTCATGAGAAGAACTAATGTTGCGATAAGAAACTTGGA
GATGCAAGTGGGGCAGATAGCAAATGACCAAAAATCTAAACCCCAAAGCACATTGCCTGGACACACAGAGAACCAGAAGCGTAAGAAGTTAGGAGAACATGAGACGGTAG
CCCTAACAAAGTGTAGTAGTGATGCTCTAGGGAATCCATTGCCTGTTAAACGTAAGGACCCAGAGTTAGATATAGGAGAAGCTCGTCCCACTACTATCACTTTACAACTA
GCTGATAGGTCCATAAAGAAACCGGAAGGAAAAATAGAAGATGTGCTTGTTAAAGTCGATAAGTTTATTTTTCCCGCCGATTTCATAATTTTGGATTGTGAAGCAGATCT
TGAGGTCAATGATGAGCAGGTAACCTTCAATGTCCTCGATGAGATGCGTCTCTCGGATGAAGTCGAAGACTACTCTACAATAGGGGCAATCATGGAGGAACTCCAGGAAA
TGATTGTGGAAGACTTAGAAGGTGATTTAGAGGCCGCAGAAAAAGAAGCCAAGTGCAATTTTGCCCCAATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATAGGAATCCACAAGATCCTCCACCTCCACAAAATCCACCTGTGAACGGAGATATGGCAGGGATAAATAATCCTTTACCCCAAGCCGCACAGTTCCAGCTCAAGCC
AGTCATGTTCCAGATCTATGCATTTCAACTTTCTGGTGTCTCTGAGGATGCACTAAGATTAAAAATGTTTCCTTTTTCTCTCATGGATGGTGCAAGGATTTGGCTAAACG
CGCTAGAACCAAATTCTGTCAACACGTGGGCAGAACTGACGGAGAAATTTTTGGCGAAGTACCACACTTTGACCAGGAACCCAGACCTTCGAGAAGACATTGTGTCTTTC
CGACAAAAGGAGAATGAAGCAATTGAGCAGTTCTATAAAGGATTAGATCATTCATCAAGAATGATGTTGAACACCAGAGCTAATGGTTCGTTGTTAGAAAAGTTGGTTAA
TGAGATCGTTGATATCTTAAACAAGATAACAGACATTAATGACCAAGGTCAAGGTGCCCAGTGGAATTTCAATTCATATTCAAACACTTACAACCCTGGATGGAGGCACC
ATCCAAACTTTTCTTGGAGTAATCAAGGAGTAGCTAGTAGCAGTGCGCAAGCACCCGCATTGCCGCCACAACAATACAATCAACAACGAGCTCAAAATACTACTCAACAA
GGTGGTGACAACGCAAGTTTTGAGGCCATGATGAAAGAATTCATGACAAGAAGTGAAGCTACAACAAAAGAGTTCATGAGAAGAACTAATGTTGCGATAAGAAACTTGGA
GATGCAAGTGGGGCAGATAGCAAATGACCAAAAATCTAAACCCCAAAGCACATTGCCTGGACACACAGAGAACCAGAAGCGTAAGAAGTTAGGAGAACATGAGACGGTAG
CCCTAACAAAGTGTAGTAGTGATGCTCTAGGGAATCCATTGCCTGTTAAACGTAAGGACCCAGAGTTAGATATAGGAGAAGCTCGTCCCACTACTATCACTTTACAACTA
GCTGATAGGTCCATAAAGAAACCGGAAGGAAAAATAGAAGATGTGCTTGTTAAAGTCGATAAGTTTATTTTTCCCGCCGATTTCATAATTTTGGATTGTGAAGCAGATCT
TGAGGTCAATGATGAGCAGGTAACCTTCAATGTCCTCGATGAGATGCGTCTCTCGGATGAAGTCGAAGACTACTCTACAATAGGGGCAATCATGGAGGAACTCCAGGAAA
TGATTGTGGAAGACTTAGAAGGTGATTTAGAGGCCGCAGAAAAAGAAGCCAAGTGCAATTTTGCCCCAATTTGA
Protein sequenceShow/hide protein sequence
MNRNPQDPPPPQNPPVNGDMAGINNPLPQAAQFQLKPVMFQIYAFQLSGVSEDALRLKMFPFSLMDGARIWLNALEPNSVNTWAELTEKFLAKYHTLTRNPDLREDIVSF
RQKENEAIEQFYKGLDHSSRMMLNTRANGSLLEKLVNEIVDILNKITDINDQGQGAQWNFNSYSNTYNPGWRHHPNFSWSNQGVASSSAQAPALPPQQYNQQRAQNTTQQ
GGDNASFEAMMKEFMTRSEATTKEFMRRTNVAIRNLEMQVGQIANDQKSKPQSTLPGHTENQKRKKLGEHETVALTKCSSDALGNPLPVKRKDPELDIGEARPTTITLQL
ADRSIKKPEGKIEDVLVKVDKFIFPADFIILDCEADLEVNDEQVTFNVLDEMRLSDEVEDYSTIGAIMEELQEMIVEDLEGDLEAAEKEAKCNFAPI