; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc02g18980 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc02g18980
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRNase H domain-containing protein
Genome locationchr2:14143958..14145425
RNA-Seq ExpressionMoc02g18980
SyntenyMoc02g18980
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022152110.1 uncharacterized protein LOC111019899 [Momordica charantia]1.8e-1747Show/hide
Query:  STFLTLEVLRTFGWDASKLKRCPSPLVSFEGEKVYPEGSIELLLTLGEGREAITMVEEFVVIDDPSAYNDILGTLAIHNFKVVPSIYYQVMKLPTPVGWG
        +  L+L      GW  S+LK+ P+PLV F GE V PEG I+L +TLG+ +  +T + EFVV+D  SAYN I G   IH+F+ +PS  +QV+K  TP G G
Subjt:  STFLTLEVLRTFGWDASKLKRCPSPLVSFEGEKVYPEGSIELLLTLGEGREAITMVEEFVVIDDPSAYNDILGTLAIHNFKVVPSIYYQVMKLPTPVGWG

XP_022155866.1 uncharacterized protein LOC111022880 [Momordica charantia]3.6e-1848Show/hide
Query:  STFLTLEVLRTFGWDASKLKRCPSPLVSFEGEKVYPEGSIELLLTLGEGREAITMVEEFVVIDDPSAYNDILGTLAIHNFKVVPSIYYQVMKLPTPVGWG
        +  L+L      GW  S+L+R P+PLV F GE V PEG I+L +TLG+ +  IT + EFVV+D  S YN I G   IH+F+ +PS  +QV+K PTP G G
Subjt:  STFLTLEVLRTFGWDASKLKRCPSPLVSFEGEKVYPEGSIELLLTLGEGREAITMVEEFVVIDDPSAYNDILGTLAIHNFKVVPSIYYQVMKLPTPVGWG

XP_022156175.1 uncharacterized protein LOC111023128 [Momordica charantia]7.3e-1950Show/hide
Query:  STFLTLEVLRTFGWDASKLKRCPSPLVSFEGEKVYPEGSIELLLTLGEGREAITMVEEFVVIDDPSAYNDILGTLAIHNFKVVPSIYYQVMKLPTPVG
        +  L+L      GW+ S+LKRCP+PLV F GE +  EG  +L +T+GE    +  V EFV++D  SAYN ILG   IH  +VVPS Y+QVMK PTP G
Subjt:  STFLTLEVLRTFGWDASKLKRCPSPLVSFEGEKVYPEGSIELLLTLGEGREAITMVEEFVVIDDPSAYNDILGTLAIHNFKVVPSIYYQVMKLPTPVG

XP_022157676.1 uncharacterized protein LOC111024332 [Momordica charantia]3.1e-1747Show/hide
Query:  STFLTLEVLRTFGWDASKLKRCPSPLVSFEGEKVYPEGSIELLLTLGEGREAITMVEEFVVIDDPSAYNDILGTLAIHNFKVVPSIYYQVMKLPTPVGWG
        +  L+L      GW  S+LKR P+PLV F GE V PEG I+L +TLG+ +  +T + EFVV+D  S YN I G   IH+F+ +PS  +QV+K  TP G G
Subjt:  STFLTLEVLRTFGWDASKLKRCPSPLVSFEGEKVYPEGSIELLLTLGEGREAITMVEEFVVIDDPSAYNDILGTLAIHNFKVVPSIYYQVMKLPTPVGWG

XP_022158513.1 uncharacterized protein LOC111024986 [Momordica charantia]2.7e-2159.78Show/hide
Query:  LTLEVLRTFGWDASKLKRCPSPLVSFEGEKVYPEGSIELLLTLGEGREAITMVEEFVVIDDPSAYNDILGTLAIHNFKVVPSIYYQVMKLPT
        L L +L T GWD + LKRC   LV F GE+++ EGSIEL LTLGEG+E +T +EEF+VID   AYN ILG LAIHN + VP  Y+Q MK PT
Subjt:  LTLEVLRTFGWDASKLKRCPSPLVSFEGEKVYPEGSIELLLTLGEGREAITMVEEFVVIDDPSAYNDILGTLAIHNFKVVPSIYYQVMKLPT

TrEMBL top hitse value%identityAlignment
A0A2N9G9X9 RNase H domain-containing protein1.1e-1729.46Show/hide
Query:  DAMRQAGEFPTKSMPDFMAQIQWHVAREELLEAQ----SLSKKPNESSRKEKGKSLDWTTFAKREFDESPLVSKILAWIDGTPVDSL-LHWLERSQSDSA
        D + Q  + P KSM + M + Q  +  E+  EA+    S  +K  E  R +  KS      +K+++                P DS  + W  +  SD A
Subjt:  DAMRQAGEFPTKSMPDFMAQIQWHVAREELLEAQ----SLSKKPNESSRKEKGKSLDWTTFAKREFDESPLVSKILAWIDGTPVDSL-LHWLERSQSDSA

Query:  KKDKSKYCKFYSDHGHDIADCHNLEDQ--------------STFLTLEVLRTFGWDASKLKRCPSPLVSFEGEKVYPEGSIELLLTLGEGREAITMVEEF
        ++ K  YC+F+ DHGH   DC  L+ Q              +  + L   +    D  +LK    PLV F G+KV P G + L++  G   + +    EF
Subjt:  KKDKSKYCKFYSDHGHDIADCHNLEDQ--------------STFLTLEVLRTFGWDASKLKRCPSPLVSFEGEKVYPEGSIELLLTLGEGREAITMVEEF

Query:  VVIDDPSAYNDILGTLAIHNFKVVPSIYYQVMKLPTPVGWG
        +V+D PSAYN I+G   ++  K V S Y+ +++ PT  G G
Subjt:  VVIDDPSAYNDILGTLAIHNFKVVPSIYYQVMKLPTPVGWG

A0A6J1DD03 uncharacterized protein LOC1110198998.7e-1847Show/hide
Query:  STFLTLEVLRTFGWDASKLKRCPSPLVSFEGEKVYPEGSIELLLTLGEGREAITMVEEFVVIDDPSAYNDILGTLAIHNFKVVPSIYYQVMKLPTPVGWG
        +  L+L      GW  S+LK+ P+PLV F GE V PEG I+L +TLG+ +  +T + EFVV+D  SAYN I G   IH+F+ +PS  +QV+K  TP G G
Subjt:  STFLTLEVLRTFGWDASKLKRCPSPLVSFEGEKVYPEGSIELLLTLGEGREAITMVEEFVVIDDPSAYNDILGTLAIHNFKVVPSIYYQVMKLPTPVGWG

A0A6J1DPJ9 uncharacterized protein LOC1110231283.5e-1950Show/hide
Query:  STFLTLEVLRTFGWDASKLKRCPSPLVSFEGEKVYPEGSIELLLTLGEGREAITMVEEFVVIDDPSAYNDILGTLAIHNFKVVPSIYYQVMKLPTPVG
        +  L+L      GW+ S+LKRCP+PLV F GE +  EG  +L +T+GE    +  V EFV++D  SAYN ILG   IH  +VVPS Y+QVMK PTP G
Subjt:  STFLTLEVLRTFGWDASKLKRCPSPLVSFEGEKVYPEGSIELLLTLGEGREAITMVEEFVVIDDPSAYNDILGTLAIHNFKVVPSIYYQVMKLPTPVG

A0A6J1DT04 uncharacterized protein LOC1110228801.8e-1848Show/hide
Query:  STFLTLEVLRTFGWDASKLKRCPSPLVSFEGEKVYPEGSIELLLTLGEGREAITMVEEFVVIDDPSAYNDILGTLAIHNFKVVPSIYYQVMKLPTPVGWG
        +  L+L      GW  S+L+R P+PLV F GE V PEG I+L +TLG+ +  IT + EFVV+D  S YN I G   IH+F+ +PS  +QV+K PTP G G
Subjt:  STFLTLEVLRTFGWDASKLKRCPSPLVSFEGEKVYPEGSIELLLTLGEGREAITMVEEFVVIDDPSAYNDILGTLAIHNFKVVPSIYYQVMKLPTPVGWG

A0A6J1DWB0 uncharacterized protein LOC1110249861.3e-2159.78Show/hide
Query:  LTLEVLRTFGWDASKLKRCPSPLVSFEGEKVYPEGSIELLLTLGEGREAITMVEEFVVIDDPSAYNDILGTLAIHNFKVVPSIYYQVMKLPT
        L L +L T GWD + LKRC   LV F GE+++ EGSIEL LTLGEG+E +T +EEF+VID   AYN ILG LAIHN + VP  Y+Q MK PT
Subjt:  LTLEVLRTFGWDASKLKRCPSPLVSFEGEKVYPEGSIELLLTLGEGREAITMVEEFVVIDDPSAYNDILGTLAIHNFKVVPSIYYQVMKLPT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAACATCCTAACCGTAGAGCTTCTGAAGGGATTCAAAGGCACGCACATCGACAAGTATGATGGGTCTGAGGGTCCCATAGATCACGCCACCTCATACCATGACGC
CATGAGGCAGGCTGGAGAATTCCCAACCAAGTCCATGCCCGACTTTATGGCCCAGATTCAATGGCACGTCGCCAGAGAAGAGTTACTCGAGGCCCAATCCCTGAGTAAGA
AGCCTAACGAGTCATCTCGGAAGGAAAAAGGCAAGTCGTTAGATTGGACCACCTTTGCTAAGAGGGAGTTCGATGAGTCTCCTCTTGTCTCCAAGATACTAGCATGGATT
GACGGAACACCTGTTGATAGCTTGCTTCATTGGCTGGAACGATCCCAAAGTGACTCTGCTAAGAAGGACAAAAGCAAGTACTGTAAGTTTTACAGCGACCACGGACATGA
CATAGCCGACTGCCACAACCTCGAGGATCAGAGCACGTTCCTCACGCTAGAAGTGCTACGAACCTTCGGATGGGATGCCTCCAAGCTAAAAAGATGTCCCTCGCCCCTGG
TCAGCTTTGAAGGCGAAAAAGTCTACCCGGAAGGTAGTATTGAATTACTGCTAACCCTAGGGGAGGGCAGGGAAGCTATCACTATGGTCGAGGAGTTTGTGGTAATAGAT
GACCCATCTGCATATAACGACATCTTAGGCACACTAGCCATACATAACTTTAAAGTCGTCCCGTCCATCTACTACCAAGTAATGAAGCTTCCTACTCCAGTGGGATGGGG
TCTGTGGTCGGAAGCAACGTGCCTCGCGAATGTCCTACATGACGGCCATGAAGGAGCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCAACATCCTAACCGTAGAGCTTCTGAAGGGATTCAAAGGCACGCACATCGACAAGTATGATGGGTCTGAGGGTCCCATAGATCACGCCACCTCATACCATGACGC
CATGAGGCAGGCTGGAGAATTCCCAACCAAGTCCATGCCCGACTTTATGGCCCAGATTCAATGGCACGTCGCCAGAGAAGAGTTACTCGAGGCCCAATCCCTGAGTAAGA
AGCCTAACGAGTCATCTCGGAAGGAAAAAGGCAAGTCGTTAGATTGGACCACCTTTGCTAAGAGGGAGTTCGATGAGTCTCCTCTTGTCTCCAAGATACTAGCATGGATT
GACGGAACACCTGTTGATAGCTTGCTTCATTGGCTGGAACGATCCCAAAGTGACTCTGCTAAGAAGGACAAAAGCAAGTACTGTAAGTTTTACAGCGACCACGGACATGA
CATAGCCGACTGCCACAACCTCGAGGATCAGAGCACGTTCCTCACGCTAGAAGTGCTACGAACCTTCGGATGGGATGCCTCCAAGCTAAAAAGATGTCCCTCGCCCCTGG
TCAGCTTTGAAGGCGAAAAAGTCTACCCGGAAGGTAGTATTGAATTACTGCTAACCCTAGGGGAGGGCAGGGAAGCTATCACTATGGTCGAGGAGTTTGTGGTAATAGAT
GACCCATCTGCATATAACGACATCTTAGGCACACTAGCCATACATAACTTTAAAGTCGTCCCGTCCATCTACTACCAAGTAATGAAGCTTCCTACTCCAGTGGGATGGGG
TCTGTGGTCGGAAGCAACGTGCCTCGCGAATGTCCTACATGACGGCCATGAAGGAGCCTAA
Protein sequenceShow/hide protein sequence
MANILTVELLKGFKGTHIDKYDGSEGPIDHATSYHDAMRQAGEFPTKSMPDFMAQIQWHVAREELLEAQSLSKKPNESSRKEKGKSLDWTTFAKREFDESPLVSKILAWI
DGTPVDSLLHWLERSQSDSAKKDKSKYCKFYSDHGHDIADCHNLEDQSTFLTLEVLRTFGWDASKLKRCPSPLVSFEGEKVYPEGSIELLLTLGEGREAITMVEEFVVID
DPSAYNDILGTLAIHNFKVVPSIYYQVMKLPTPVGWGLWSEATCLANVLHDGHEGA