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Moc02g19150 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc02g19150
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr2:14205456..14207953
RNA-Seq ExpressionMoc02g19150
SyntenyMoc02g19150
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022151719.1 uncharacterized protein LOC111019634 [Momordica charantia]1.4e-1648.28Show/hide
Query:  EVGEDQAPPLHPGDREHIPINEGINYSLREHDLRKHLVDKKRKASRSLGVSLSCSPVYSNSDFKAQSKYQPLTPEAVITREEFDLMKHRFYEQAEALKAK
        ++ E +   L P  + H    E   Y+ +  DLR+HL ++KR +S   G S SCS  + NS+ +A+S Y P+TPE VITREEFD +K +F  Q EALKAK
Subjt:  EVGEDQAPPLHPGDREHIPINEGINYSLREHDLRKHLVDKKRKASRSLGVSLSCSPVYSNSDFKAQSKYQPLTPEAVITREEFDLMKHRFYEQAEALKAK

Query:  CERNENSFDDGEMGES
        CE+ E+SFDDG++GES
Subjt:  CERNENSFDDGEMGES

XP_022154406.1 uncharacterized protein LOC111021683 [Momordica charantia]2.7e-3164.04Show/hide
Query:  GEDQAPPLHPGDREHIPINEGINYSLREHDLRKHLVDKKRKASRSLGVSLSCSPVYSNSDFKAQSKYQPLTPEAVITREEFDLMKHRFYEQAEALKAKCE
        GE  AP + PGDRE IP + G++YSLR++D+RKHL +KK++ASR    SLS S  +SNS+ KAQSKY+PL PEA+ITREEFDLMKH+F EQ EALKA+CE
Subjt:  GEDQAPPLHPGDREHIPINEGINYSLREHDLRKHLVDKKRKASRSLGVSLSCSPVYSNSDFKAQSKYQPLTPEAVITREEFDLMKHRFYEQAEALKAKCE

Query:  RNENSFDDGEMGES
        + E SFD+G++GES
Subjt:  RNENSFDDGEMGES

XP_022155128.1 uncharacterized protein LOC111022267 [Momordica charantia]3.3e-1344.44Show/hide
Query:  EGINYSLREHDLRKHLVDKKRKASRSLGVSLSCSPVYSNSDFKAQSKYQPLTPEAVITREEFDLMKHRFYEQAEALKAKCERNENSFDDGEMGESIHFGC
        E   Y+ +  DLR+HL    RK S SL    S S  + NS+ +A+S Y P+TP+ VITREEFD +K +F  Q EALKA CE+ E+SFDDG++GE + F  
Subjt:  EGINYSLREHDLRKHLVDKKRKASRSLGVSLSCSPVYSNSDFKAQSKYQPLTPEAVITREEFDLMKHRFYEQAEALKAKCERNENSFDDGEMGESIHFGC

Query:  NAPRYSASSWPATPTQRLSTPTDGSR
        +           TPT +   P DGS+
Subjt:  NAPRYSASSWPATPTQRLSTPTDGSR

XP_022155139.1 uncharacterized protein LOC111022280 [Momordica charantia]3.5e-3157.24Show/hide
Query:  GEDQAPPLHPGDREHIPINEGINYSLREHDLRKHLVDKKRKASRSLGVSLSCSPVYSNSDFKAQSKYQPLTPEAVITREEFDLMKHRFYEQAEALKAKCE
        GE  AP + PG+RE IP +EG++YSLR++DLRKHL DKK+KAS     SLS S  +SNS+ KAQSKY+PL PEAVI REEFDLMKHRF EQ EALKA+CE
Subjt:  GEDQAPPLHPGDREHIPINEGINYSLREHDLRKHLVDKKRKASRSLGVSLSCSPVYSNSDFKAQSKYQPLTPEAVITREEFDLMKHRFYEQAEALKAKCE

Query:  RNENSFDDGEMGESIHFGCNAPRYSASSWPATPTQRLSTPTDGSR
        + E+ FDD ++GES  F  +           TPT +   P DGS+
Subjt:  RNENSFDDGEMGESIHFGCNAPRYSASSWPATPTQRLSTPTDGSR

XP_022157897.1 uncharacterized protein LOC111024503 [Momordica charantia]1.4e-1975.68Show/hide
Query:  KASRSLGVSLSCSPVYSNSDFKAQSKYQPLTPEAVITREEFDLMKHRFYEQAEALKAKCERNENSFDDGEMGES
        +ASR    S S S  +SNSDFKAQSKY+PLTPEAVITREEFDLMKHRF EQ EALKAKCE+ E SFDDG++GES
Subjt:  KASRSLGVSLSCSPVYSNSDFKAQSKYQPLTPEAVITREEFDLMKHRFYEQAEALKAKCERNENSFDDGEMGES

TrEMBL top hitse value%identityAlignment
A0A6J1DDW5 uncharacterized protein LOC1110196346.9e-1748.28Show/hide
Query:  EVGEDQAPPLHPGDREHIPINEGINYSLREHDLRKHLVDKKRKASRSLGVSLSCSPVYSNSDFKAQSKYQPLTPEAVITREEFDLMKHRFYEQAEALKAK
        ++ E +   L P  + H    E   Y+ +  DLR+HL ++KR +S   G S SCS  + NS+ +A+S Y P+TPE VITREEFD +K +F  Q EALKAK
Subjt:  EVGEDQAPPLHPGDREHIPINEGINYSLREHDLRKHLVDKKRKASRSLGVSLSCSPVYSNSDFKAQSKYQPLTPEAVITREEFDLMKHRFYEQAEALKAK

Query:  CERNENSFDDGEMGES
        CE+ E+SFDDG++GES
Subjt:  CERNENSFDDGEMGES

A0A6J1DM55 uncharacterized protein LOC1110222671.6e-1344.44Show/hide
Query:  EGINYSLREHDLRKHLVDKKRKASRSLGVSLSCSPVYSNSDFKAQSKYQPLTPEAVITREEFDLMKHRFYEQAEALKAKCERNENSFDDGEMGESIHFGC
        E   Y+ +  DLR+HL    RK S SL    S S  + NS+ +A+S Y P+TP+ VITREEFD +K +F  Q EALKA CE+ E+SFDDG++GE + F  
Subjt:  EGINYSLREHDLRKHLVDKKRKASRSLGVSLSCSPVYSNSDFKAQSKYQPLTPEAVITREEFDLMKHRFYEQAEALKAKCERNENSFDDGEMGESIHFGC

Query:  NAPRYSASSWPATPTQRLSTPTDGSR
        +           TPT +   P DGS+
Subjt:  NAPRYSASSWPATPTQRLSTPTDGSR

A0A6J1DNM4 Ribonuclease H1.3e-3164.04Show/hide
Query:  GEDQAPPLHPGDREHIPINEGINYSLREHDLRKHLVDKKRKASRSLGVSLSCSPVYSNSDFKAQSKYQPLTPEAVITREEFDLMKHRFYEQAEALKAKCE
        GE  AP + PGDRE IP + G++YSLR++D+RKHL +KK++ASR    SLS S  +SNS+ KAQSKY+PL PEA+ITREEFDLMKH+F EQ EALKA+CE
Subjt:  GEDQAPPLHPGDREHIPINEGINYSLREHDLRKHLVDKKRKASRSLGVSLSCSPVYSNSDFKAQSKYQPLTPEAVITREEFDLMKHRFYEQAEALKAKCE

Query:  RNENSFDDGEMGES
        + E SFD+G++GES
Subjt:  RNENSFDDGEMGES

A0A6J1DPC9 uncharacterized protein LOC1110222801.7e-3157.24Show/hide
Query:  GEDQAPPLHPGDREHIPINEGINYSLREHDLRKHLVDKKRKASRSLGVSLSCSPVYSNSDFKAQSKYQPLTPEAVITREEFDLMKHRFYEQAEALKAKCE
        GE  AP + PG+RE IP +EG++YSLR++DLRKHL DKK+KAS     SLS S  +SNS+ KAQSKY+PL PEAVI REEFDLMKHRF EQ EALKA+CE
Subjt:  GEDQAPPLHPGDREHIPINEGINYSLREHDLRKHLVDKKRKASRSLGVSLSCSPVYSNSDFKAQSKYQPLTPEAVITREEFDLMKHRFYEQAEALKAKCE

Query:  RNENSFDDGEMGESIHFGCNAPRYSASSWPATPTQRLSTPTDGSR
        + E+ FDD ++GES  F  +           TPT +   P DGS+
Subjt:  RNENSFDDGEMGESIHFGCNAPRYSASSWPATPTQRLSTPTDGSR

A0A6J1DVR0 uncharacterized protein LOC1110245036.7e-2075.68Show/hide
Query:  KASRSLGVSLSCSPVYSNSDFKAQSKYQPLTPEAVITREEFDLMKHRFYEQAEALKAKCERNENSFDDGEMGES
        +ASR    S S S  +SNSDFKAQSKY+PLTPEAVITREEFDLMKHRF EQ EALKAKCE+ E SFDDG++GES
Subjt:  KASRSLGVSLSCSPVYSNSDFKAQSKYQPLTPEAVITREEFDLMKHRFYEQAEALKAKCERNENSFDDGEMGES

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATGAGGTTGGGGAGGATCAAGCTCCACCCCTCCACCCAGGCGATCGTGAGCACATCCCTATTAACGAGGGGATCAACTACAGCTTGAGGGAGCATGATCTCAGGAA
GCACCTCGTTGACAAGAAGAGGAAGGCTTCACGAAGTCTGGGGGTCTCTCTGTCCTGCTCCCCGGTGTATTCCAACTCCGACTTCAAGGCTCAATCGAAGTACCAGCCTT
TGACACCAGAGGCCGTGATTACTAGGGAAGAGTTCGACCTGATGAAACATAGGTTCTACGAACAGGCCGAGGCACTCAAGGCTAAGTGTGAAAGGAATGAGAACTCATTT
GATGATGGTGAGATGGGCGAGTCCATTCACTTTGGATGTAACGCCCCGCGTTACTCAGCAAGCTCATGGCCGGCAACCCCGACACAGCGGCTCTCAACTCCGACAGACGG
CAGCAGGCGGCGCGACTTGGACTGCAGCAAGTGTGCGACTCTGGCCAGCAGCGGTGCATGGCGACGAACAGCATCGGACGCGCGACTTCGGGCAGCATCGGGCGTGCACA
CGGTGTCGGGCAGTAGCAGGCGGCGGCAGTGCAAAGTGGGTGCTGTTCTGGGACGTTTTCTTGCGGCGCATCTCCCCCCTCGCGAGCGGGTTCGGTCTCCCTTGGTGGTC
GGAAATCGTGGCGTGGGTCCTTGCTGCACACAGCGTAGTGGGTATCGATTTGGTTATCTTGGAAGGGTTAGTGGGAGTTGTCAAAAGGGATGGAACGGGTTAGCTGTTGT
TATCATGACCAATACGCCGGTAGTCATCGGTACCTTGGGGATAAAGGACAAGGCCGAACAACAAGTTGCTATAGATGAGTATTGGGATCTTGGGGATAAATGTCAAGAAC
CAATGCGCCGAGTAGTCATCGATACCTTGGGGATAAATGTCAAGGACCGATGCACAGTTCAAGGCCTTGGGAATAAATGGCAAGGTCGAACGCCAAGCTTTTGTAGAGGG
AGGTCGGTATCTTGGGGATAA
mRNA sequenceShow/hide mRNA sequence
ATGTATGAGGTTGGGGAGGATCAAGCTCCACCCCTCCACCCAGGCGATCGTGAGCACATCCCTATTAACGAGGGGATCAACTACAGCTTGAGGGAGCATGATCTCAGGAA
GCACCTCGTTGACAAGAAGAGGAAGGCTTCACGAAGTCTGGGGGTCTCTCTGTCCTGCTCCCCGGTGTATTCCAACTCCGACTTCAAGGCTCAATCGAAGTACCAGCCTT
TGACACCAGAGGCCGTGATTACTAGGGAAGAGTTCGACCTGATGAAACATAGGTTCTACGAACAGGCCGAGGCACTCAAGGCTAAGTGTGAAAGGAATGAGAACTCATTT
GATGATGGTGAGATGGGCGAGTCCATTCACTTTGGATGTAACGCCCCGCGTTACTCAGCAAGCTCATGGCCGGCAACCCCGACACAGCGGCTCTCAACTCCGACAGACGG
CAGCAGGCGGCGCGACTTGGACTGCAGCAAGTGTGCGACTCTGGCCAGCAGCGGTGCATGGCGACGAACAGCATCGGACGCGCGACTTCGGGCAGCATCGGGCGTGCACA
CGGTGTCGGGCAGTAGCAGGCGGCGGCAGTGCAAAGTGGGTGCTGTTCTGGGACGTTTTCTTGCGGCGCATCTCCCCCCTCGCGAGCGGGTTCGGTCTCCCTTGGTGGTC
GGAAATCGTGGCGTGGGTCCTTGCTGCACACAGCGTAGTGGGTATCGATTTGGTTATCTTGGAAGGGTTAGTGGGAGTTGTCAAAAGGGATGGAACGGGTTAGCTGTTGT
TATCATGACCAATACGCCGGTAGTCATCGGTACCTTGGGGATAAAGGACAAGGCCGAACAACAAGTTGCTATAGATGAGTATTGGGATCTTGGGGATAAATGTCAAGAAC
CAATGCGCCGAGTAGTCATCGATACCTTGGGGATAAATGTCAAGGACCGATGCACAGTTCAAGGCCTTGGGAATAAATGGCAAGGTCGAACGCCAAGCTTTTGTAGAGGG
AGGTCGGTATCTTGGGGATAA
Protein sequenceShow/hide protein sequence
MYEVGEDQAPPLHPGDREHIPINEGINYSLREHDLRKHLVDKKRKASRSLGVSLSCSPVYSNSDFKAQSKYQPLTPEAVITREEFDLMKHRFYEQAEALKAKCERNENSF
DDGEMGESIHFGCNAPRYSASSWPATPTQRLSTPTDGSRRRDLDCSKCATLASSGAWRRTASDARLRAASGVHTVSGSSRRRQCKVGAVLGRFLAAHLPPRERVRSPLVV
GNRGVGPCCTQRSGYRFGYLGRVSGSCQKGWNGLAVVIMTNTPVVIGTLGIKDKAEQQVAIDEYWDLGDKCQEPMRRVVIDTLGINVKDRCTVQGLGNKWQGRTPSFCRG
RSVSWG