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Moc02g19190 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc02g19190
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionUnknown protein
Genome locationchr2:14216900..14217795
RNA-Seq ExpressionMoc02g19190
SyntenyMoc02g19190
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_019106178.1 PREDICTED: uncharacterized protein LOC109135517 [Beta vulgaris subsp. vulgaris]9.3e-0542.05Show/hide
Query:  DWAECFAVFEGLRLALEAGFSQLQIETDSLRISQLLDS---DSVSFSFTRRDGN-----LAQLSVTSSQLHVWLEDGPAEISGTVVVD
        D AE  +   GL++ALEAG+S L +E D L++   L     +S  FS  RR GN     LA++      L VWLED P EI+  V+VD
Subjt:  DWAECFAVFEGLRLALEAGFSQLQIETDSLRISQLLDS---DSVSFSFTRRDGN-----LAQLSVTSSQLHVWLEDGPAEISGTVVVD

XP_021736574.1 uncharacterized protein LOC110703132 [Chenopodium quinoa]1.6e-0433.93Show/hide
Query:  VDWAECFAVFEGLRLALEAGFSQLQIETDSLRISQLLDS----------------------DSVSFSFTRRDGN-----LAQLSVTSSQLHVWLEDGPAE
        VD  E  A+    R+A+EAGFS+  +ETD+L++   +                          +SFSF RR GN     LA +S   S+  VWLED P E
Subjt:  VDWAECFAVFEGLRLALEAGFSQLQIETDSLRISQLLDS----------------------DSVSFSFTRRDGN-----LAQLSVTSSQLHVWLEDGPAE

Query:  ISGTVVVDGSSL
        I G +  D + L
Subjt:  ISGTVVVDGSSL

XP_021770747.1 uncharacterized protein LOC110734931 [Chenopodium quinoa]3.2e-0541.67Show/hide
Query:  VDWAECFAVFEGLRLALEAGFSQLQIETDSLRISQLLDSDSVSFSFTRRDGNLAQLSVTSSQLHVWLEDGPAEISGTVVVDGSS
        VD  E  A+   L +A+EAGF ++ +ETD+L++  ++    V  S  R   NLA+LS+  S L VWLE+ PAEI   V+ D +S
Subjt:  VDWAECFAVFEGLRLALEAGFSQLQIETDSLRISQLLDSDSVSFSFTRRDGNLAQLSVTSSQLHVWLEDGPAEISGTVVVDGSS

XP_022135942.1 uncharacterized protein LOC111007775 [Momordica charantia]1.2e-0428.3Show/hide
Query:  PVFQVGVRTGFEVKNRCAD-SCINRGGCYHSRFGGPCLPHGDAALSCIPGVDWAECFAVFEGLRLALEAGFSQLQIETDSLRISQLLDSD----------
        P F+V V   F+  N  A    + R    +      C       ++ +  V  AEC A  EG+ LA+EAG    QIETDS ++  LL +D          
Subjt:  PVFQVGVRTGFEVKNRCAD-SCINRGGCYHSRFGGPCLPHGDAALSCIPGVDWAECFAVFEGLRLALEAGFSQLQIETDSLRISQLLDSD----------

Query:  -------------SVSFSFTRRDGN-----LAQLSVTSSQLHVWLEDGPAEISGTVVVD
                        FSF  R+GN     LA++ + S   HVW+E+  +++S  +  D
Subjt:  -------------SVSFSFTRRDGN-----LAQLSVTSSQLHVWLEDGPAEISGTVVVD

XP_022150944.1 uncharacterized protein LOC111018973 [Momordica charantia]5.5e-1346.79Show/hide
Query:  VDWAECFAVFEGLRLALEAGFSQLQIETDSLRISQLLDSD-----------------------SVSFSFTRRDGN-----LAQLSVTSSQLHVWLEDGPA
        VDW E FAV+EG+ LA+EAGF + QIETDSLRI  LL +D                        VSFSFT R+GN     LAQL++TS  L +W+E+ P 
Subjt:  VDWAECFAVFEGLRLALEAGFSQLQIETDSLRISQLLDSD-----------------------SVSFSFTRRDGN-----LAQLSVTSSQLHVWLEDGPA

Query:  EISGTVVVD
        EIS  + VD
Subjt:  EISGTVVVD

TrEMBL top hitse value%identityAlignment
A0A6J1C467 uncharacterized protein LOC1110077755.9e-0528.3Show/hide
Query:  PVFQVGVRTGFEVKNRCAD-SCINRGGCYHSRFGGPCLPHGDAALSCIPGVDWAECFAVFEGLRLALEAGFSQLQIETDSLRISQLLDSD----------
        P F+V V   F+  N  A    + R    +      C       ++ +  V  AEC A  EG+ LA+EAG    QIETDS ++  LL +D          
Subjt:  PVFQVGVRTGFEVKNRCAD-SCINRGGCYHSRFGGPCLPHGDAALSCIPGVDWAECFAVFEGLRLALEAGFSQLQIETDSLRISQLLDSD----------

Query:  -------------SVSFSFTRRDGN-----LAQLSVTSSQLHVWLEDGPAEISGTVVVD
                        FSF  R+GN     LA++ + S   HVW+E+  +++S  +  D
Subjt:  -------------SVSFSFTRRDGN-----LAQLSVTSSQLHVWLEDGPAEISGTVVVD

A0A6J1DBJ7 uncharacterized protein LOC1110189732.6e-1346.79Show/hide
Query:  VDWAECFAVFEGLRLALEAGFSQLQIETDSLRISQLLDSD-----------------------SVSFSFTRRDGN-----LAQLSVTSSQLHVWLEDGPA
        VDW E FAV+EG+ LA+EAGF + QIETDSLRI  LL +D                        VSFSFT R+GN     LAQL++TS  L +W+E+ P 
Subjt:  VDWAECFAVFEGLRLALEAGFSQLQIETDSLRISQLLDSD-----------------------SVSFSFTRRDGN-----LAQLSVTSSQLHVWLEDGPA

Query:  EISGTVVVD
        EIS  + VD
Subjt:  EISGTVVVD

A0A803LHG6 Uncharacterized protein6.5e-0432.37Show/hide
Query:  HSRFGGPCLPH-GD-AALSCIP-----GVDWAECFAVFEGLRLALEAGFSQLQIETDSLRISQLLDSD----------------------SVSFSFTRRD
        H  FGG    + GD  A +C+       VD  E  A+   L++A+E+GF +L +ETD+L++   L                         S  F F +R+
Subjt:  HSRFGGPCLPH-GD-AALSCIP-----GVDWAECFAVFEGLRLALEAGFSQLQIETDSLRISQLLDSD----------------------SVSFSFTRRD

Query:  GN-----LAQLSVTSSQLHVWLEDGPAEISGTVVVDGSS
        GN     LA+LS T   L VWLE+ P+ I   V+ D SS
Subjt:  GN-----LAQLSVTSSQLHVWLEDGPAEISGTVVVDGSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCGGGGATAAAATATCCAATTGTCACGTTTTCCCAGTCTTTCAGGTCGGAGTTAGGACTGGGTTCGAGGTAAAGAACCGTTGTGCAGATTCCTGCATAAACAGGGG
TGGGTGTTATCATTCGCGATTCGGCGGGCCTTGTCTTCCTCACGGCGATGCGGCCCTTTCTTGTATTCCGGGGGTGGACTGGGCTGAATGTTTTGCCGTGTTTGAGGGCC
TCCGGTTAGCTCTGGAGGCTGGATTTTCTCAACTTCAGATTGAGACCGACTCTCTCCGGATTTCTCAGCTGTTGGATTCGGATAGTGTTTCGTTTAGCTTCACAAGACGG
GATGGCAATCTTGCTCAATTGTCGGTGACGTCTTCCCAGCTTCATGTTTGGCTTGAGGATGGGCCTGCAGAAATTTCTGGAACTGTTGTAGTTGATGGTAGTTCTCTATT
TTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTCGGGGATAAAATATCCAATTGTCACGTTTTCCCAGTCTTTCAGGTCGGAGTTAGGACTGGGTTCGAGGTAAAGAACCGTTGTGCAGATTCCTGCATAAACAGGGG
TGGGTGTTATCATTCGCGATTCGGCGGGCCTTGTCTTCCTCACGGCGATGCGGCCCTTTCTTGTATTCCGGGGGTGGACTGGGCTGAATGTTTTGCCGTGTTTGAGGGCC
TCCGGTTAGCTCTGGAGGCTGGATTTTCTCAACTTCAGATTGAGACCGACTCTCTCCGGATTTCTCAGCTGTTGGATTCGGATAGTGTTTCGTTTAGCTTCACAAGACGG
GATGGCAATCTTGCTCAATTGTCGGTGACGTCTTCCCAGCTTCATGTTTGGCTTGAGGATGGGCCTGCAGAAATTTCTGGAACTGTTGTAGTTGATGGTAGTTCTCTATT
TTAG
Protein sequenceShow/hide protein sequence
MFGDKISNCHVFPVFQVGVRTGFEVKNRCADSCINRGGCYHSRFGGPCLPHGDAALSCIPGVDWAECFAVFEGLRLALEAGFSQLQIETDSLRISQLLDSDSVSFSFTRR
DGNLAQLSVTSSQLHVWLEDGPAEISGTVVVDGSSLF