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Moc02g19330 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc02g19330
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionprotein FAR-RED ELONGATED HYPOCOTYL 3-like
Genome locationchr2:14378770..14380705
RNA-Seq ExpressionMoc02g19330
SyntenyMoc02g19330
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022150312.1 uncharacterized protein LOC111018510 [Momordica charantia]2.2e-5657.84Show/hide
Query:  MTSNIAESMNAVLVHACSLSVTSLLKLARALLKHWFYERRTYAFRRETILTNYGETKIRTTDNLSRTHSITPIDKHE-----------------------
        MTSN+ ESMNAV+VHA +L VT+LL+  RALL+ WFYERRTYA  RETILT+YGETK+RT +N+++TH + PI+ HE                       
Subjt:  MTSNIAESMNAVLVHACSLSVTSLLKLARALLKHWFYERRTYAFRRETILTNYGETKIRTTDNLSRTHSITPIDKHE-----------------------

Query:  ---LKLPCSHGIVEATHWNVNSYTLCSPAYSLQTLINVYTEPVYPLGHEEDWILPDDFVDFKVEPPKVVKHVGRHQIVPISSTGETRQVHKCGWCGNIRH
            + PCSH I  AT  NVN YTLCSP YSLQTLI  Y E VYP    +DWILPDDFV+ +VEP K+VKHVG+ Q V ISS GETRQ HKCG CGN+ H
Subjt:  ---LKLPCSHGIVEATHWNVNSYTLCSPAYSLQTLINVYTEPVYPLGHEEDWILPDDFVDFKVEPPKVVKHVGRHQIVPISSTGETRQVHKCGWCGNIRH

Query:  NMKT
        N KT
Subjt:  NMKT

XP_022153251.1 uncharacterized protein LOC111020787 [Momordica charantia]3.6e-6764.22Show/hide
Query:  KSTDAFEPGLRYYRMTSNIAESMNAVLVHACSLSVTSLLKLARALLKHWFYERRTYAFRRETILTNYGETKIRTTDNLSRTHSITPIDKHEL--------
        K T AF+PGLRY +MTSNIAESMNAVLVHA SL VT+LL+ ARALL+ WFYERRTY   RETILT+YGE K+RT +NLSRTHSITPID HEL        
Subjt:  KSTDAFEPGLRYYRMTSNIAESMNAVLVHACSLSVTSLLKLARALLKHWFYERRTYAFRRETILTNYGETKIRTTDNLSRTHSITPIDKHEL--------

Query:  ------------------KLPCSHGIVEATHWNVNSYTLCSPAYSLQTLINVYTEPVYPLGHEEDWILPDDFVDFKVEPPKVVKHVGRHQIVPISSTGET
                          +LPCSH I  AT+  VN YTLCSPAY+LQTLIN Y + VYPLG EEDWILPDDFVD  VE P+ V  +GR Q V I S GET
Subjt:  ------------------KLPCSHGIVEATHWNVNSYTLCSPAYSLQTLINVYTEPVYPLGHEEDWILPDDFVDFKVEPPKVVKHVGRHQIVPISSTGET

Query:  RQVHKCGWCGNIRHNMKT
        RQVHKCG CGN+ HN KT
Subjt:  RQVHKCGWCGNIRHNMKT

XP_022154930.1 uncharacterized protein LOC111022077 [Momordica charantia]1.8e-5859.72Show/hide
Query:  KSTDAFEPGLRYYRMTSNIAESMNAVLVHACSLSVTSLLKLARALLKHWFYERRTYAFRRETILTNYGETKIRTTDNLSRTHSITPIDKHEL--------
        K T AF+P LRY +MTSN AES+NAVL HA +L VT+LL+ A AL++ WFYERRTYA  RETILT+YGE K+R  +NLSR +SITPID HEL        
Subjt:  KSTDAFEPGLRYYRMTSNIAESMNAVLVHACSLSVTSLLKLARALLKHWFYERRTYAFRRETILTNYGETKIRTTDNLSRTHSITPIDKHEL--------

Query:  ------------------KLPCSHGIVEATHWNVNSYTLCSPAYSLQTLINVYTEPVYPLGHEEDWILPDDFVDFKVEPPKVVKHVGRHQIVPISSTGET
                          +LPCSH I   T  NVN Y+LCSPAYSLQTLIN Y E VYPLG EEDW+LPD+FV   VEPPK+V+ +GR Q V I S GET
Subjt:  ------------------KLPCSHGIVEATHWNVNSYTLCSPAYSLQTLINVYTEPVYPLGHEEDWILPDDFVDFKVEPPKVVKHVGRHQIVPISSTGET

Query:  RQVHKCGWCGN
        RQV KCG CGN
Subjt:  RQVHKCGWCGN

XP_022155392.1 uncharacterized protein LOC111022536 [Momordica charantia]1.2e-6764.22Show/hide
Query:  KSTDAFEPGLRYYRMTSNIAESMNAVLVHACSLSVTSLLKLARALLKHWFYERRTYAFRRETILTNYGETKIRTTDNLSRTHSITPIDKHEL--------
        K T AF+PGLRY +MTSNI ESMNAVLVHA SL VT+LL+ A  LL+ WFYERRTYA  RETILT+YGE K+RT +NLSRTHSITPID HEL        
Subjt:  KSTDAFEPGLRYYRMTSNIAESMNAVLVHACSLSVTSLLKLARALLKHWFYERRTYAFRRETILTNYGETKIRTTDNLSRTHSITPIDKHEL--------

Query:  ------------------KLPCSHGIVEATHWNVNSYTLCSPAYSLQTLINVYTEPVYPLGHEEDWILPDDFVDFKVEPPKVVKHVGRHQIVPISSTGET
                          +LPCSH I  AT+ NVN YTLCSPAY+LQTLIN Y EP YP G EEDWILPDDFVD  VEPP+ V  VGR Q V I S GET
Subjt:  ------------------KLPCSHGIVEATHWNVNSYTLCSPAYSLQTLINVYTEPVYPLGHEEDWILPDDFVDFKVEPPKVVKHVGRHQIVPISSTGET

Query:  RQVHKCGWCGNIRHNMKT
        RQVHKCG C N+ HN KT
Subjt:  RQVHKCGWCGNIRHNMKT

XP_022156830.1 uncharacterized protein LOC111023664 [Momordica charantia]7.3e-6865.69Show/hide
Query:  MTSNIAESMNAVLVHACSLSVTSLLKLARALLKHWFYERRTYAFRRETILTNYGETKIRTTDNLSRTHSITPIDKHELKL--------------------
        MTSNIAESMNAVLVHA SL VT+LL+ ARALL+ WFYERRTYA  RETILTNYGE K+RTT+NLSRTHSITPID H+L++                    
Subjt:  MTSNIAESMNAVLVHACSLSVTSLLKLARALLKHWFYERRTYAFRRETILTNYGETKIRTTDNLSRTHSITPIDKHELKL--------------------

Query:  ------PCSHGIVEATHWNVNSYTLCSPAYSLQTLINVYTEPVYPLGHEEDWILPDDFVDFKVEPPKVVKHVGRHQIVPISSTGETRQVHKCGWCGNIRH
              PCSH I   T+WNVN YTLCSPAY++QTLIN Y EPVYPLG ++DWILPDDFVD  VEPP+ V  VGR Q + I S GETRQVHKCGWCGN+ H
Subjt:  ------PCSHGIVEATHWNVNSYTLCSPAYSLQTLINVYTEPVYPLGHEEDWILPDDFVDFKVEPPKVVKHVGRHQIVPISSTGETRQVHKCGWCGNIRH

Query:  NMKT
        N KT
Subjt:  NMKT

TrEMBL top hitse value%identityAlignment
A0A6J1DAE4 uncharacterized protein LOC1110185101.1e-5657.84Show/hide
Query:  MTSNIAESMNAVLVHACSLSVTSLLKLARALLKHWFYERRTYAFRRETILTNYGETKIRTTDNLSRTHSITPIDKHE-----------------------
        MTSN+ ESMNAV+VHA +L VT+LL+  RALL+ WFYERRTYA  RETILT+YGETK+RT +N+++TH + PI+ HE                       
Subjt:  MTSNIAESMNAVLVHACSLSVTSLLKLARALLKHWFYERRTYAFRRETILTNYGETKIRTTDNLSRTHSITPIDKHE-----------------------

Query:  ---LKLPCSHGIVEATHWNVNSYTLCSPAYSLQTLINVYTEPVYPLGHEEDWILPDDFVDFKVEPPKVVKHVGRHQIVPISSTGETRQVHKCGWCGNIRH
            + PCSH I  AT  NVN YTLCSP YSLQTLI  Y E VYP    +DWILPDDFV+ +VEP K+VKHVG+ Q V ISS GETRQ HKCG CGN+ H
Subjt:  ---LKLPCSHGIVEATHWNVNSYTLCSPAYSLQTLINVYTEPVYPLGHEEDWILPDDFVDFKVEPPKVVKHVGRHQIVPISSTGETRQVHKCGWCGNIRH

Query:  NMKT
        N KT
Subjt:  NMKT

A0A6J1DK28 uncharacterized protein LOC1110207871.8e-6764.22Show/hide
Query:  KSTDAFEPGLRYYRMTSNIAESMNAVLVHACSLSVTSLLKLARALLKHWFYERRTYAFRRETILTNYGETKIRTTDNLSRTHSITPIDKHEL--------
        K T AF+PGLRY +MTSNIAESMNAVLVHA SL VT+LL+ ARALL+ WFYERRTY   RETILT+YGE K+RT +NLSRTHSITPID HEL        
Subjt:  KSTDAFEPGLRYYRMTSNIAESMNAVLVHACSLSVTSLLKLARALLKHWFYERRTYAFRRETILTNYGETKIRTTDNLSRTHSITPIDKHEL--------

Query:  ------------------KLPCSHGIVEATHWNVNSYTLCSPAYSLQTLINVYTEPVYPLGHEEDWILPDDFVDFKVEPPKVVKHVGRHQIVPISSTGET
                          +LPCSH I  AT+  VN YTLCSPAY+LQTLIN Y + VYPLG EEDWILPDDFVD  VE P+ V  +GR Q V I S GET
Subjt:  ------------------KLPCSHGIVEATHWNVNSYTLCSPAYSLQTLINVYTEPVYPLGHEEDWILPDDFVDFKVEPPKVVKHVGRHQIVPISSTGET

Query:  RQVHKCGWCGNIRHNMKT
        RQVHKCG CGN+ HN KT
Subjt:  RQVHKCGWCGNIRHNMKT

A0A6J1DL12 uncharacterized protein LOC1110220778.7e-5959.72Show/hide
Query:  KSTDAFEPGLRYYRMTSNIAESMNAVLVHACSLSVTSLLKLARALLKHWFYERRTYAFRRETILTNYGETKIRTTDNLSRTHSITPIDKHEL--------
        K T AF+P LRY +MTSN AES+NAVL HA +L VT+LL+ A AL++ WFYERRTYA  RETILT+YGE K+R  +NLSR +SITPID HEL        
Subjt:  KSTDAFEPGLRYYRMTSNIAESMNAVLVHACSLSVTSLLKLARALLKHWFYERRTYAFRRETILTNYGETKIRTTDNLSRTHSITPIDKHEL--------

Query:  ------------------KLPCSHGIVEATHWNVNSYTLCSPAYSLQTLINVYTEPVYPLGHEEDWILPDDFVDFKVEPPKVVKHVGRHQIVPISSTGET
                          +LPCSH I   T  NVN Y+LCSPAYSLQTLIN Y E VYPLG EEDW+LPD+FV   VEPPK+V+ +GR Q V I S GET
Subjt:  ------------------KLPCSHGIVEATHWNVNSYTLCSPAYSLQTLINVYTEPVYPLGHEEDWILPDDFVDFKVEPPKVVKHVGRHQIVPISSTGET

Query:  RQVHKCGWCGN
        RQV KCG CGN
Subjt:  RQVHKCGWCGN

A0A6J1DP73 uncharacterized protein LOC1110225366.0e-6864.22Show/hide
Query:  KSTDAFEPGLRYYRMTSNIAESMNAVLVHACSLSVTSLLKLARALLKHWFYERRTYAFRRETILTNYGETKIRTTDNLSRTHSITPIDKHEL--------
        K T AF+PGLRY +MTSNI ESMNAVLVHA SL VT+LL+ A  LL+ WFYERRTYA  RETILT+YGE K+RT +NLSRTHSITPID HEL        
Subjt:  KSTDAFEPGLRYYRMTSNIAESMNAVLVHACSLSVTSLLKLARALLKHWFYERRTYAFRRETILTNYGETKIRTTDNLSRTHSITPIDKHEL--------

Query:  ------------------KLPCSHGIVEATHWNVNSYTLCSPAYSLQTLINVYTEPVYPLGHEEDWILPDDFVDFKVEPPKVVKHVGRHQIVPISSTGET
                          +LPCSH I  AT+ NVN YTLCSPAY+LQTLIN Y EP YP G EEDWILPDDFVD  VEPP+ V  VGR Q V I S GET
Subjt:  ------------------KLPCSHGIVEATHWNVNSYTLCSPAYSLQTLINVYTEPVYPLGHEEDWILPDDFVDFKVEPPKVVKHVGRHQIVPISSTGET

Query:  RQVHKCGWCGNIRHNMKT
        RQVHKCG C N+ HN KT
Subjt:  RQVHKCGWCGNIRHNMKT

A0A6J1DRF6 uncharacterized protein LOC1110236643.5e-6865.69Show/hide
Query:  MTSNIAESMNAVLVHACSLSVTSLLKLARALLKHWFYERRTYAFRRETILTNYGETKIRTTDNLSRTHSITPIDKHELKL--------------------
        MTSNIAESMNAVLVHA SL VT+LL+ ARALL+ WFYERRTYA  RETILTNYGE K+RTT+NLSRTHSITPID H+L++                    
Subjt:  MTSNIAESMNAVLVHACSLSVTSLLKLARALLKHWFYERRTYAFRRETILTNYGETKIRTTDNLSRTHSITPIDKHELKL--------------------

Query:  ------PCSHGIVEATHWNVNSYTLCSPAYSLQTLINVYTEPVYPLGHEEDWILPDDFVDFKVEPPKVVKHVGRHQIVPISSTGETRQVHKCGWCGNIRH
              PCSH I   T+WNVN YTLCSPAY++QTLIN Y EPVYPLG ++DWILPDDFVD  VEPP+ V  VGR Q + I S GETRQVHKCGWCGN+ H
Subjt:  ------PCSHGIVEATHWNVNSYTLCSPAYSLQTLINVYTEPVYPLGHEEDWILPDDFVDFKVEPPKVVKHVGRHQIVPISSTGETRQVHKCGWCGNIRH

Query:  NMKT
        N KT
Subjt:  NMKT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCAATTGCATGAGAATGAGGTTGAACGAGGATATTGGAGCAGAGTTTGAGAACCATACTGGGAATGTGTATGACAATGGGAACGAGGATGTGCTTGAAGAACATTT
TGAGAATAAAGGTCAACCTGTTAACGAGTCTCATACAATGAGTGGGAATGCACCTTGTGGAACAATTGAAGGAGTAGTTTCCCGTCCAACGCAAAATATCATAACTGGTG
ATGAGGCAGAGTATGTAGGATTTACTAAAGAAGGTTTGCATGCGAAGAGGATCCGAGGTGATGACTCATTCATCATTTTGAAGTTTATCGATGTCCACGAATGCAAACGT
GAGGATTTTCAGAGGTCCAAAAGTACAGATGCATTTGAACCGGGCTTAAGGTACTACCGAATGACATCTAATATTGCAGAGTCTATGAATGCAGTCCTCGTCCATGCATG
TTCATTGTCAGTCACTTCACTTCTCAAACTTGCTCGAGCACTCTTAAAGCACTGGTTTTACGAGAGGCGAACCTACGCATTCAGACGCGAAACTATTCTTACTAACTATG
GTGAGACTAAGATACGTACTACGGATAACCTCTCTCGTACACACTCCATCACACCCATTGACAAACACGAGTTGAAGCTTCCGTGCTCCCATGGTATTGTAGAGGCAACC
CATTGGAACGTGAACAGCTATACCCTATGCTCACCTGCATATAGTCTCCAAACTCTCATTAACGTATATACCGAACCTGTGTACCCTCTCGGACATGAAGAGGATTGGAT
TTTACCTGATGACTTCGTCGACTTTAAAGTGGAGCCACCCAAAGTTGTTAAACATGTTGGCCGACATCAAATTGTACCAATATCATCTACTGGAGAGACCCGCCAAGTCC
ACAAATGCGGTTGGTGTGGCAACATTAGGCATAATATGAAAACATGA
mRNA sequenceShow/hide mRNA sequence
ATGGTCAATTGCATGAGAATGAGGTTGAACGAGGATATTGGAGCAGAGTTTGAGAACCATACTGGGAATGTGTATGACAATGGGAACGAGGATGTGCTTGAAGAACATTT
TGAGAATAAAGGTCAACCTGTTAACGAGTCTCATACAATGAGTGGGAATGCACCTTGTGGAACAATTGAAGGAGTAGTTTCCCGTCCAACGCAAAATATCATAACTGGTG
ATGAGGCAGAGTATGTAGGATTTACTAAAGAAGGTTTGCATGCGAAGAGGATCCGAGGTGATGACTCATTCATCATTTTGAAGTTTATCGATGTCCACGAATGCAAACGT
GAGGATTTTCAGAGGTCCAAAAGTACAGATGCATTTGAACCGGGCTTAAGGTACTACCGAATGACATCTAATATTGCAGAGTCTATGAATGCAGTCCTCGTCCATGCATG
TTCATTGTCAGTCACTTCACTTCTCAAACTTGCTCGAGCACTCTTAAAGCACTGGTTTTACGAGAGGCGAACCTACGCATTCAGACGCGAAACTATTCTTACTAACTATG
GTGAGACTAAGATACGTACTACGGATAACCTCTCTCGTACACACTCCATCACACCCATTGACAAACACGAGTTGAAGCTTCCGTGCTCCCATGGTATTGTAGAGGCAACC
CATTGGAACGTGAACAGCTATACCCTATGCTCACCTGCATATAGTCTCCAAACTCTCATTAACGTATATACCGAACCTGTGTACCCTCTCGGACATGAAGAGGATTGGAT
TTTACCTGATGACTTCGTCGACTTTAAAGTGGAGCCACCCAAAGTTGTTAAACATGTTGGCCGACATCAAATTGTACCAATATCATCTACTGGAGAGACCCGCCAAGTCC
ACAAATGCGGTTGGTGTGGCAACATTAGGCATAATATGAAAACATGA
Protein sequenceShow/hide protein sequence
MVNCMRMRLNEDIGAEFENHTGNVYDNGNEDVLEEHFENKGQPVNESHTMSGNAPCGTIEGVVSRPTQNIITGDEAEYVGFTKEGLHAKRIRGDDSFIILKFIDVHECKR
EDFQRSKSTDAFEPGLRYYRMTSNIAESMNAVLVHACSLSVTSLLKLARALLKHWFYERRTYAFRRETILTNYGETKIRTTDNLSRTHSITPIDKHELKLPCSHGIVEAT
HWNVNSYTLCSPAYSLQTLINVYTEPVYPLGHEEDWILPDDFVDFKVEPPKVVKHVGRHQIVPISSTGETRQVHKCGWCGNIRHNMKT