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Moc02g19370 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc02g19370
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionprotein FAR-RED ELONGATED HYPOCOTYL 3-like
Genome locationchr2:14402305..14403704
RNA-Seq ExpressionMoc02g19370
SyntenyMoc02g19370
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR004332 - Transposase, MuDR, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022148915.1 uncharacterized protein LOC111017466 [Momordica charantia]2.2e-1752.83Show/hide
Query:  LVLREANLRIQMETILTNYGETKMRTVENLSRTHSSTPIEKYELE--------------------------LPCSHATTAATHRNVNSYTLCSPAYSIQT
        LVLR+       ETILT+YGE KMRTVENLSRTHS+ PI+ +ELE                          LPCSHA  A T+RNVN YTLCSP Y++QT
Subjt:  LVLREANLRIQMETILTNYGETKMRTVENLSRTHSSTPIEKYELE--------------------------LPCSHATTAATHRNVNSYTLCSPAYSIQT

Query:  LVNAYA
        L+NAYA
Subjt:  LVNAYA

XP_022154930.1 uncharacterized protein LOC111022077 [Momordica charantia]5.1e-1951.22Show/hide
Query:  QDIITGDEAEYVGEIVVKGIFRSKKELRFKLSVLAIKLNFEFKVKKSTKTLYNVACTEE----GLRAKRIRGGDSFIILKFTDVQKCKPLVLREANLRIQ
        Q+I + D  + VG+IVV GIFRSK ELRFKL VLA+KLNFEF+VKKSTKTLY V C E     GL A RIRG DSF I K+TDV  C   VL   + + +
Subjt:  QDIITGDEAEYVGEIVVKGIFRSKKELRFKLSVLAIKLNFEFKVKKSTKTLYNVACTEE----GLRAKRIRGGDSFIILKFTDVQKCKPLVLREANLRIQ

Query:  METILTNYGETKMRTVENLSRTH
           +    G+     +E++SR +
Subjt:  METILTNYGETKMRTVENLSRTH

XP_022154930.1 uncharacterized protein LOC111022077 [Momordica charantia]2.5e-1352.13Show/hide
Query:  ETILTNYGETKMRTVENLSRTHSSTPIEKYEL--------------------------ELPCSHATTAATHRNVNSYTLCSPAYSIQTLVNAYA
        ETILT+YGE KMR  ENLSR +S TPI+ +EL                          ELPCSHA  A T +NVN Y+LCSPAYS+QTL+NAYA
Subjt:  ETILTNYGETKMRTVENLSRTHSSTPIEKYEL--------------------------ELPCSHATTAATHRNVNSYTLCSPAYSIQTLVNAYA

XP_022154930.1 uncharacterized protein LOC111022077 [Momordica charantia]3.3e-1880.95Show/hide
Query:  MQDIITGDEAEYVGEIVVKGIFRSKKELRFKLSVLAIKLNFEFKVKKSTKTLYNVACTEEGLR
        MQ+IITG+E+ YVGEI VK IFRSK+ELRFKLSVLAIKLNFEFKVKKSTKTLY V CTE+G +
Subjt:  MQDIITGDEAEYVGEIVVKGIFRSKKELRFKLSVLAIKLNFEFKVKKSTKTLYNVACTEEGLR

XP_022156802.1 uncharacterized protein LOC111023635 [Momordica charantia]1.3e-2545.7Show/hide
Query:  MQDIITGDEAEYVGEIVVKGIFRSKKELRFKLSVLAIKLNFEFKVKKSTKTLYNVACTEE----GLRAKRIRGGDSFIILKFTDVQKCKPLVLREANLRI
        MQ+IITG+ ++++GEI VKGIFRSK+ELRFKLSVLA+KLNF+FKVKKSTKTL+ V CTE+    GLRAK I+GGDSFII KF D  KCK  VL   + + 
Subjt:  MQDIITGDEAEYVGEIVVKGIFRSKKELRFKLSVLAIKLNFEFKVKKSTKTLYNVACTEE----GLRAKRIRGGDSFIILKFTDVQKCKPLVLREANLRI

Query:  QMETILTNYGETKMRTVENLSRTHSSTPI-----EKYELELPCSHATTAATHRNVNSYTLCSPAYSIQTLVNAY------ANLCTL
        +   +    G+     VE++SR +    I       Y + +    A  A   +NV    L  P     TL+  Y       N CT+
Subjt:  QMETILTNYGETKMRTVENLSRTHSSTPI-----EKYELELPCSHATTAATHRNVNSYTLCSPAYSIQTLVNAY------ANLCTL

XP_022156943.1 protein FAR-RED ELONGATED HYPOCOTYL 3-like [Momordica charantia]1.5e-2355.65Show/hide
Query:  MQDIITGDEAEYVGEIVVKGIFRSKKELRFKLSVLAIKLNFEFKVKKSTKTLYNVACTEE----GLRAKRIRGGDSFIILKFTDVQKCKPLVLREANLRI
        MQ+II  ++++YV EI VKGIFRSK++LRFKLSVLA+K NFEFKVKKSTKTLY V CT++    GLR K IR GDSFII KF DV KCK  VL   + + 
Subjt:  MQDIITGDEAEYVGEIVVKGIFRSKKELRFKLSVLAIKLNFEFKVKKSTKTLYNVACTEE----GLRAKRIRGGDSFIILKFTDVQKCKPLVLREANLRI

Query:  QMETILTNYGETKMRTVENLSRTH
        Q   +    G+     +E++SR +
Subjt:  QMETILTNYGETKMRTVENLSRTH

TrEMBL top hitse value%identityAlignment
A0A6J1D499 uncharacterized protein LOC1110174661.0e-1752.83Show/hide
Query:  LVLREANLRIQMETILTNYGETKMRTVENLSRTHSSTPIEKYELE--------------------------LPCSHATTAATHRNVNSYTLCSPAYSIQT
        LVLR+       ETILT+YGE KMRTVENLSRTHS+ PI+ +ELE                          LPCSHA  A T+RNVN YTLCSP Y++QT
Subjt:  LVLREANLRIQMETILTNYGETKMRTVENLSRTHSSTPIEKYELE--------------------------LPCSHATTAATHRNVNSYTLCSPAYSIQT

Query:  LVNAYA
        L+NAYA
Subjt:  LVNAYA

A0A6J1DL12 uncharacterized protein LOC1110220772.5e-1951.22Show/hide
Query:  QDIITGDEAEYVGEIVVKGIFRSKKELRFKLSVLAIKLNFEFKVKKSTKTLYNVACTEE----GLRAKRIRGGDSFIILKFTDVQKCKPLVLREANLRIQ
        Q+I + D  + VG+IVV GIFRSK ELRFKL VLA+KLNFEF+VKKSTKTLY V C E     GL A RIRG DSF I K+TDV  C   VL   + + +
Subjt:  QDIITGDEAEYVGEIVVKGIFRSKKELRFKLSVLAIKLNFEFKVKKSTKTLYNVACTEE----GLRAKRIRGGDSFIILKFTDVQKCKPLVLREANLRIQ

Query:  METILTNYGETKMRTVENLSRTH
           +    G+     +E++SR +
Subjt:  METILTNYGETKMRTVENLSRTH

A0A6J1DL12 uncharacterized protein LOC1110220771.2e-1352.13Show/hide
Query:  ETILTNYGETKMRTVENLSRTHSSTPIEKYEL--------------------------ELPCSHATTAATHRNVNSYTLCSPAYSIQTLVNAYA
        ETILT+YGE KMR  ENLSR +S TPI+ +EL                          ELPCSHA  A T +NVN Y+LCSPAYS+QTL+NAYA
Subjt:  ETILTNYGETKMRTVENLSRTHSSTPIEKYEL--------------------------ELPCSHATTAATHRNVNSYTLCSPAYSIQTLVNAYA

A0A6J1DL12 uncharacterized protein LOC1110220771.6e-1880.95Show/hide
Query:  MQDIITGDEAEYVGEIVVKGIFRSKKELRFKLSVLAIKLNFEFKVKKSTKTLYNVACTEEGLR
        MQ+IITG+E+ YVGEI VK IFRSK+ELRFKLSVLAIKLNFEFKVKKSTKTLY V CTE+G +
Subjt:  MQDIITGDEAEYVGEIVVKGIFRSKKELRFKLSVLAIKLNFEFKVKKSTKTLYNVACTEEGLR

A0A6J1DS25 protein FAR-RED ELONGATED HYPOCOTYL 3-like7.5e-2455.65Show/hide
Query:  MQDIITGDEAEYVGEIVVKGIFRSKKELRFKLSVLAIKLNFEFKVKKSTKTLYNVACTEE----GLRAKRIRGGDSFIILKFTDVQKCKPLVLREANLRI
        MQ+II  ++++YV EI VKGIFRSK++LRFKLSVLA+K NFEFKVKKSTKTLY V CT++    GLR K IR GDSFII KF DV KCK  VL   + + 
Subjt:  MQDIITGDEAEYVGEIVVKGIFRSKKELRFKLSVLAIKLNFEFKVKKSTKTLYNVACTEE----GLRAKRIRGGDSFIILKFTDVQKCKPLVLREANLRI

Query:  QMETILTNYGETKMRTVENLSRTH
        Q   +    G+     +E++SR +
Subjt:  QMETILTNYGETKMRTVENLSRTH

A0A6J1DSY0 uncharacterized protein LOC1110236356.1e-2645.7Show/hide
Query:  MQDIITGDEAEYVGEIVVKGIFRSKKELRFKLSVLAIKLNFEFKVKKSTKTLYNVACTEE----GLRAKRIRGGDSFIILKFTDVQKCKPLVLREANLRI
        MQ+IITG+ ++++GEI VKGIFRSK+ELRFKLSVLA+KLNF+FKVKKSTKTL+ V CTE+    GLRAK I+GGDSFII KF D  KCK  VL   + + 
Subjt:  MQDIITGDEAEYVGEIVVKGIFRSKKELRFKLSVLAIKLNFEFKVKKSTKTLYNVACTEE----GLRAKRIRGGDSFIILKFTDVQKCKPLVLREANLRI

Query:  QMETILTNYGETKMRTVENLSRTHSSTPI-----EKYELELPCSHATTAATHRNVNSYTLCSPAYSIQTLVNAY------ANLCTL
        +   +    G+     VE++SR +    I       Y + +    A  A   +NV    L  P     TL+  Y       N CT+
Subjt:  QMETILTNYGETKMRTVENLSRTHSSTPI-----EKYELELPCSHATTAATHRNVNSYTLCSPAYSIQTLVNAY------ANLCTL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGATATCATAACTGGTGATGAGGCGGAGTATGTAGGTGAAATTGTTGTTAAGGGTATTTTTCGTTCAAAGAAAGAACTACGCTTCAAGTTGTCAGTGTTG
GCTATTAAGCTTAATTTTGAATTTAAGGTTAAAAAATCAACGAAGACATTGTACAACGTAGCATGTACTGAAGAAGGTTTGCGTGCTAAGAGGATCCGAGGTGGT
GACTCATTCATCATTTTGAAGTTTACTGATGTCCAGAAATGCAAACCACTGGTTTTACGAGAGGCGAACCTACGTATTCAGATGGAAACTATTCTTACTAACTAT
GGTGAGACTAAGATGCGTACTGTGGAGAACCTCTCTCGTACACACTCCAGTACACCCATTGAAAAATACGAGTTGGAGCTTCCGTGCTCCCATGCTACTACAGCA
GCAACCCATCGAAACGTGAACAGCTACACCCTATGCTCACCTGCATATAGTATCCAAACTCTCGTTAACGCATATGCGAACCTGTGTACTCTCTCAAAGATGAAG
AGGATTGGATTTTACCTGATGACTTCGTCGACTTTAAAGTGGAGCAGTCCAAAGTTGTTAAACTTGTCGGCCAACGTCAAATTGTATGAATACCATCTGCTGGAG
AGATCCGCCAAGTCCACAAATGCGGTTGGTGTGGCAACATTAGGCATAATAGGAAAACATGCCGCCAACTACTTAGAACTATGGATCGAGACACGGATGGTTAGT
AGCTCAACTGTTCACATGCTTTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAAGATATCATAACTGGTGATGAGGCGGAGTATGTAGGTGAAATTGTTGTTAAGGGTATTTTTCGTTCAAAGAAAGAACTACGCTTCAAGTTGTCAGTGTTG
GCTATTAAGCTTAATTTTGAATTTAAGGTTAAAAAATCAACGAAGACATTGTACAACGTAGCATGTACTGAAGAAGGTTTGCGTGCTAAGAGGATCCGAGGTGGT
GACTCATTCATCATTTTGAAGTTTACTGATGTCCAGAAATGCAAACCACTGGTTTTACGAGAGGCGAACCTACGTATTCAGATGGAAACTATTCTTACTAACTAT
GGTGAGACTAAGATGCGTACTGTGGAGAACCTCTCTCGTACACACTCCAGTACACCCATTGAAAAATACGAGTTGGAGCTTCCGTGCTCCCATGCTACTACAGCA
GCAACCCATCGAAACGTGAACAGCTACACCCTATGCTCACCTGCATATAGTATCCAAACTCTCGTTAACGCATATGCGAACCTGTGTACTCTCTCAAAGATGAAG
AGGATTGGATTTTACCTGATGACTTCGTCGACTTTAAAGTGGAGCAGTCCAAAGTTGTTAAACTTGTCGGCCAACGTCAAATTGTATGAATACCATCTGCTGGAG
AGATCCGCCAAGTCCACAAATGCGGTTGGTGTGGCAACATTAGGCATAATAGGAAAACATGCCGCCAACTACTTAGAACTATGGATCGAGACACGGATGGTTAGT
AGCTCAACTGTTCACATGCTTTTGTAA
Protein sequenceShow/hide protein sequence
MQDIITGDEAEYVGEIVVKGIFRSKKELRFKLSVLAIKLNFEFKVKKSTKTLYNVACTEEGLRAKRIRGGDSFIILKFTDVQKCKPLVLREANLRIQMETILTNY
GETKMRTVENLSRTHSSTPIEKYELELPCSHATTAATHRNVNSYTLCSPAYSIQTLVNAYANLCTLSKMKRIGFYLMTSSTLKWSSPKLLNLSANVKLYEYHLLE
RSAKSTNAVGVATLGIIGKHAANYLELWIETRMVSSSTVHMLL