; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc02g20010 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc02g20010
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionReverse transcriptase
Genome locationchr2:14863061..14863830
RNA-Seq ExpressionMoc02g20010
SyntenyMoc02g20010
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA3485159.1 reverse transcriptase [Gossypium australe]1.6e-0424.89Show/hide
Query:  SIFILIPDMQDQLVNRDFEEFSVILWGIWNLRNGL-SVGGSFPVGATDSWTIHYMASFHVACAARSLPSVSRGYRSVCQWLPPTYGFLKLNIDASF-YPS
        SIF  + D + +L+       S+ LW IW +RN L   G  F +  T  +   Y+    ++C +   P      +    W PP   F+KLN DASF   S
Subjt:  SIFILIPDMQDQLVNRDFEEFSVILWGIWNLRNGL-SVGGSFPVGATDSWTIHYMASFHVACAARSLPSVSRGYRSVCQWLPPTYGFLKLNIDASF-YPS

Query:  RSV-----------LVWGL------------------------------FSVTLLVVFSLLFLSDLRQR-----------------CLQLDSVRFGFTRR
        +S            L+ G                               F   +L   SL  +  LR                      ++ V F F+ R
Subjt:  RSV-----------LVWGL------------------------------FSVTLLVVFSLLFLSDLRQR-----------------CLQLDSVRFGFTRR

Query:  KSNGAAHQLALLAFSHHLDCVWFEEVPPVISKILLSN
        K N AAH LA+  +   L C W EE+P  ++ I++ N
Subjt:  KSNGAAHQLALLAFSHHLDCVWFEEVPPVISKILLSN

KAG2689722.1 hypothetical protein I3760_09G152300 [Carya illinoinensis]3.6e-0422.73Show/hide
Query:  SIFILIPDMQDQLVNRDFEEFSVILWGIWNLRNGLSVGGSF-PVGATDSWTIHYMASFHVACAARSLPSVSRGYRSVCQWLPPTYGFLKLNIDASFYPSR
        S+  LI  M   L   + EE +V++W IW  RN L    SF P     +     +  F +A      P+  RG      W+ PT G +K+N DA+    +
Subjt:  SIFILIPDMQDQLVNRDFEEFSVILWGIWNLRNGLSVGGSF-PVGATDSWTIHYMASFHVACAARSLPSVSRGYRSVCQWLPPTYGFLKLNIDASFYPSR

Query:  SVLVWGLF----------------------------SVTLLVVFSL---------LFLSDLRQRCLQLDSVRFGFTRRKSNGAAHQLALLAFSHHLDCVW
            +G+                             + T++   +            + D+++   Q    +  +  R SNGAAH LA  A     + +W
Subjt:  SVLVWGLF----------------------------SVTLLVVFSL---------LFLSDLRQRCLQLDSVRFGFTRRKSNGAAHQLALLAFSHHLDCVW

Query:  FEEVPPVISKILLSNSAISL
         EE P  I++ +     ++L
Subjt:  FEEVPPVISKILLSNSAISL

XP_021722108.1 uncharacterized protein LOC110689646 [Chenopodium quinoa]2.5e-0529.67Show/hide
Query:  ILWGIWNLRNGLSV-GGSFPVGATDSWTIHYMASFHVACAARSLPSVSRGYRSVCQWLPPTYGFLKLNIDASFYPSRSVLVWGLFSVTL--LVVFSLLFL
        ILWGIW  RN  S       +       +  +  +  A  A S  S  R      +W PPT G +K+N DA+ + + +V + G+    L  +VV + L L
Subjt:  ILWGIWNLRNGLSV-GGSFPVGATDSWTIHYMASFHVACAARSLPSVSRGYRSVCQWLPPTYGFLKLNIDASFYPSRSVLVWGLFSVTL--LVVFSLLFL

Query:  -----------------------SDLRQRCLQLDSVRFGFTRRKSNGAAHQLALLAFSHHLDCVWFEEVPPVISKILLSNSA
                               S+ R+      S  F F +R  NGAAH LA L+ S+    VW EEVP  IS  ++++ A
Subjt:  -----------------------SDLRQRCLQLDSVRFGFTRRKSNGAAHQLALLAFSHHLDCVWFEEVPPVISKILLSNSA

XP_022150918.1 uncharacterized protein LOC111018954 [Momordica charantia]1.6e-0433.65Show/hide
Query:  SIFILIPDMQDQLVNRDFEEFSVILWGIWNLRNGLSVGGS----FPVG-ATDSWTIHYMASFHVACAARSLPSVSRGYRSV-CQWLPPTYGFLKLNIDAS
        S F+++ +  + L   DFEE  V++WG+WN RN  +   S    F +G     W   Y   F     A+S P   R   +    W PP  G  K+N DAS
Subjt:  SIFILIPDMQDQLVNRDFEEFSVILWGIWNLRNGLSVGGS----FPVG-ATDSWTIHYMASFHVACAARSLPSVSRGYRSV-CQWLPPTYGFLKLNIDAS

Query:  FYPS
        F  S
Subjt:  FYPS

XP_035551053.1 uncharacterized protein LOC118349651 [Juglans regia]1.2e-0425.54Show/hide
Query:  ILIPDMQDQLVNRDFEEFSVILWGIWNLRNGLSVGGSFPVGATDSWTIHYMASFHVAC----AARSLPSVSRGYRSVCQWLPPTYGFLKLNIDASFYPSR
        +L  D+ + L   + E   V+++ +W  RN       F    + S       S    C      R   S+ +G  S   W PP   F+K N DA+F  + 
Subjt:  ILIPDMQDQLVNRDFEEFSVILWGIWNLRNGLSVGGSFPVGATDSWTIHYMASFHVAC----AARSLPSVSRGYRSVCQWLPPTYGFLKLNIDASFYPSR

Query:  SVLVWGLFSVTLLVVFSL-LFLSDLRQRCLQLDSVRFGFTRRKSNGAAHQLALLAFSHHLDCVWFEEVPPVISKILLSNSAISL
          +  G+          L   + DL+Q  +   S +  F  R++N  AH  A LA S+ +DC W  + PP +  ++L +   S+
Subjt:  SVLVWGLFSVTLLVVFSL-LFLSDLRQRCLQLDSVRFGFTRRKSNGAAHQLALLAFSHHLDCVWFEEVPPVISKILLSNSAISL

TrEMBL top hitse value%identityAlignment
A0A5B6WTC7 Reverse transcriptase7.9e-0524.89Show/hide
Query:  SIFILIPDMQDQLVNRDFEEFSVILWGIWNLRNGL-SVGGSFPVGATDSWTIHYMASFHVACAARSLPSVSRGYRSVCQWLPPTYGFLKLNIDASF-YPS
        SIF  + D + +L+       S+ LW IW +RN L   G  F +  T  +   Y+    ++C +   P      +    W PP   F+KLN DASF   S
Subjt:  SIFILIPDMQDQLVNRDFEEFSVILWGIWNLRNGL-SVGGSFPVGATDSWTIHYMASFHVACAARSLPSVSRGYRSVCQWLPPTYGFLKLNIDASF-YPS

Query:  RSV-----------LVWGL------------------------------FSVTLLVVFSLLFLSDLRQR-----------------CLQLDSVRFGFTRR
        +S            L+ G                               F   +L   SL  +  LR                      ++ V F F+ R
Subjt:  RSV-----------LVWGL------------------------------FSVTLLVVFSLLFLSDLRQR-----------------CLQLDSVRFGFTRR

Query:  KSNGAAHQLALLAFSHHLDCVWFEEVPPVISKILLSN
        K N AAH LA+  +   L C W EE+P  ++ I++ N
Subjt:  KSNGAAHQLALLAFSHHLDCVWFEEVPPVISKILLSN

A0A6J1DAR4 uncharacterized protein LOC1110189547.9e-0533.65Show/hide
Query:  SIFILIPDMQDQLVNRDFEEFSVILWGIWNLRNGLSVGGS----FPVG-ATDSWTIHYMASFHVACAARSLPSVSRGYRSV-CQWLPPTYGFLKLNIDAS
        S F+++ +  + L   DFEE  V++WG+WN RN  +   S    F +G     W   Y   F     A+S P   R   +    W PP  G  K+N DAS
Subjt:  SIFILIPDMQDQLVNRDFEEFSVILWGIWNLRNGLSVGGS----FPVG-ATDSWTIHYMASFHVACAARSLPSVSRGYRSV-CQWLPPTYGFLKLNIDAS

Query:  FYPS
        F  S
Subjt:  FYPS

A0A6P9F580 uncharacterized protein LOC1183496516.1e-0525.54Show/hide
Query:  ILIPDMQDQLVNRDFEEFSVILWGIWNLRNGLSVGGSFPVGATDSWTIHYMASFHVAC----AARSLPSVSRGYRSVCQWLPPTYGFLKLNIDASFYPSR
        +L  D+ + L   + E   V+++ +W  RN       F    + S       S    C      R   S+ +G  S   W PP   F+K N DA+F  + 
Subjt:  ILIPDMQDQLVNRDFEEFSVILWGIWNLRNGLSVGGSFPVGATDSWTIHYMASFHVAC----AARSLPSVSRGYRSVCQWLPPTYGFLKLNIDASFYPSR

Query:  SVLVWGLFSVTLLVVFSL-LFLSDLRQRCLQLDSVRFGFTRRKSNGAAHQLALLAFSHHLDCVWFEEVPPVISKILLSNSAISL
          +  G+          L   + DL+Q  +   S +  F  R++N  AH  A LA S+ +DC W  + PP +  ++L +   S+
Subjt:  SVLVWGLFSVTLLVVFSL-LFLSDLRQRCLQLDSVRFGFTRRKSNGAAHQLALLAFSHHLDCVWFEEVPPVISKILLSNSAISL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCTCCATGTATTATGGTCTTGTTCTGTCTCTCGTTCCTAGTATTTTTATTTTGATTCCTGATATGCAAGACCAATTGGTGAATCGCGATTTTGAAGAATTTTCTGT
TATTCTTTGGGGCATTTGGAATTTACGGAATGGGCTCTCTGTAGGCGGTTCTTTTCCTGTGGGGGCTACGGATAGTTGGACGATACATTACATGGCTTCTTTCCACGTTG
CGTGTGCCGCTCGATCATTGCCTTCTGTTTCCCGTGGCTACCGTTCGGTTTGTCAATGGCTCCCTCCGACTTATGGTTTTCTCAAATTGAATATCGATGCATCCTTCTAT
CCCTCTCGCTCCGTGCTGGTTTGGGGTTTATTCTCAGTGACGCTACTGGTTGTGTTCTCCTTGCTGTTTCTGTCGGATCTTCGTCAACGTTGTTTGCAACTTGATTCTGT
TCGTTTTGGTTTCACTCGCCGGAAGAGTAATGGTGCGGCTCACCAACTTGCTCTTCTTGCTTTCTCGCATCATTTGGATTGCGTTTGGTTTGAAGAAGTGCCTCCTGTCA
TTTCTAAGATACTTCTTTCTAATTCTGCTATTTCTCTTGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTCTCCATGTATTATGGTCTTGTTCTGTCTCTCGTTCCTAGTATTTTTATTTTGATTCCTGATATGCAAGACCAATTGGTGAATCGCGATTTTGAAGAATTTTCTGT
TATTCTTTGGGGCATTTGGAATTTACGGAATGGGCTCTCTGTAGGCGGTTCTTTTCCTGTGGGGGCTACGGATAGTTGGACGATACATTACATGGCTTCTTTCCACGTTG
CGTGTGCCGCTCGATCATTGCCTTCTGTTTCCCGTGGCTACCGTTCGGTTTGTCAATGGCTCCCTCCGACTTATGGTTTTCTCAAATTGAATATCGATGCATCCTTCTAT
CCCTCTCGCTCCGTGCTGGTTTGGGGTTTATTCTCAGTGACGCTACTGGTTGTGTTCTCCTTGCTGTTTCTGTCGGATCTTCGTCAACGTTGTTTGCAACTTGATTCTGT
TCGTTTTGGTTTCACTCGCCGGAAGAGTAATGGTGCGGCTCACCAACTTGCTCTTCTTGCTTTCTCGCATCATTTGGATTGCGTTTGGTTTGAAGAAGTGCCTCCTGTCA
TTTCTAAGATACTTCTTTCTAATTCTGCTATTTCTCTTGTTTAG
Protein sequenceShow/hide protein sequence
MFSMYYGLVLSLVPSIFILIPDMQDQLVNRDFEEFSVILWGIWNLRNGLSVGGSFPVGATDSWTIHYMASFHVACAARSLPSVSRGYRSVCQWLPPTYGFLKLNIDASFY
PSRSVLVWGLFSVTLLVVFSLLFLSDLRQRCLQLDSVRFGFTRRKSNGAAHQLALLAFSHHLDCVWFEEVPPVISKILLSNSAISLV