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Moc02g20080 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc02g20080
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr2:14884903..14885502
RNA-Seq ExpressionMoc02g20080
SyntenyMoc02g20080
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022154406.1 uncharacterized protein LOC111021683 [Momordica charantia]1.9e-0947.87Show/hide
Query:  MEETYNEMIRANRTGSYSKVPGRADDLPEDGDDLDPPIHLDDYEPAAKNKGIDYSLRDHDLQKHLVDKERKASQGQGISSSCSKKYSNSNLKAQ
        ME+ Y E  RANRT S S  PG        G+   P I   D EP   + G+DYSLRD+D++KHL +K+++AS+    S S S+K+SNSNLKAQ
Subjt:  MEETYNEMIRANRTGSYSKVPGRADDLPEDGDDLDPPIHLDDYEPAAKNKGIDYSLRDHDLQKHLVDKERKASQGQGISSSCSKKYSNSNLKAQ

XP_022155139.1 uncharacterized protein LOC111022280 [Momordica charantia]2.8e-0551.56Show/hide
Query:  GDDLDPPIHLDDYEPAAKNKGIDYSLRDHDLQKHLVDKERKASQGQGISSSCSKKYSNSNLKAQ
        G+   P I   + EP   ++G+DYSLRD+DL+KHL DK++KAS     S S S+++SNSNLKAQ
Subjt:  GDDLDPPIHLDDYEPAAKNKGIDYSLRDHDLQKHLVDKERKASQGQGISSSCSKKYSNSNLKAQ

XP_022156638.1 uncharacterized protein LOC111023488 [Momordica charantia]2.2e-2655.47Show/hide
Query:  MVQPTESTNTVEGRALNGNNGAQRELDTKATEDQARAEQEVKPPRRAAPAADPKILATLQRGLDDMRNRVHTMEETYNEMIRANRTGSYSKVPGRADDLP
        MVQP ES NT E RALNGNN AQ ELD K TE+Q +A QEV PPRR+                   RN    +   +    +ANR        G  DDLP
Subjt:  MVQPTESTNTVEGRALNGNNGAQRELDTKATEDQARAEQEVKPPRRAAPAADPKILATLQRGLDDMRNRVHTMEETYNEMIRANRTGSYSKVPGRADDLP

Query:  EDGDDLDPPIHLDDYEPAAKNKGIDYSLRDHDLQKHL
        EDGDDLDPPIH DDYEPA +NKGIDYSLRDHDL+KHL
Subjt:  EDGDDLDPPIHLDDYEPAAKNKGIDYSLRDHDLQKHL

XP_022157193.1 uncharacterized protein LOC111023967 [Momordica charantia]4.3e-0663.27Show/hide
Query:  MEETYNEMIRANRTGSYSKVPGRADDLPEDGDDLDPPIHLDDYEPAAKN
        MEETYN+M+  NR  S S VPG  DDL +DGDD D P H DDYEP A N
Subjt:  MEETYNEMIRANRTGSYSKVPGRADDLPEDGDDLDPPIHLDDYEPAAKN

TrEMBL top hitse value%identityAlignment
A0A6J1DNM4 Ribonuclease H9.0e-1047.87Show/hide
Query:  MEETYNEMIRANRTGSYSKVPGRADDLPEDGDDLDPPIHLDDYEPAAKNKGIDYSLRDHDLQKHLVDKERKASQGQGISSSCSKKYSNSNLKAQ
        ME+ Y E  RANRT S S  PG        G+   P I   D EP   + G+DYSLRD+D++KHL +K+++AS+    S S S+K+SNSNLKAQ
Subjt:  MEETYNEMIRANRTGSYSKVPGRADDLPEDGDDLDPPIHLDDYEPAAKNKGIDYSLRDHDLQKHLVDKERKASQGQGISSSCSKKYSNSNLKAQ

A0A6J1DPC9 uncharacterized protein LOC1110222801.3e-0551.56Show/hide
Query:  GDDLDPPIHLDDYEPAAKNKGIDYSLRDHDLQKHLVDKERKASQGQGISSSCSKKYSNSNLKAQ
        G+   P I   + EP   ++G+DYSLRD+DL+KHL DK++KAS     S S S+++SNSNLKAQ
Subjt:  GDDLDPPIHLDDYEPAAKNKGIDYSLRDHDLQKHLVDKERKASQGQGISSSCSKKYSNSNLKAQ

A0A6J1DR60 uncharacterized protein LOC1110234881.1e-2655.47Show/hide
Query:  MVQPTESTNTVEGRALNGNNGAQRELDTKATEDQARAEQEVKPPRRAAPAADPKILATLQRGLDDMRNRVHTMEETYNEMIRANRTGSYSKVPGRADDLP
        MVQP ES NT E RALNGNN AQ ELD K TE+Q +A QEV PPRR+                   RN    +   +    +ANR        G  DDLP
Subjt:  MVQPTESTNTVEGRALNGNNGAQRELDTKATEDQARAEQEVKPPRRAAPAADPKILATLQRGLDDMRNRVHTMEETYNEMIRANRTGSYSKVPGRADDLP

Query:  EDGDDLDPPIHLDDYEPAAKNKGIDYSLRDHDLQKHL
        EDGDDLDPPIH DDYEPA +NKGIDYSLRDHDL+KHL
Subjt:  EDGDDLDPPIHLDDYEPAAKNKGIDYSLRDHDLQKHL

A0A6J1DSR0 uncharacterized protein LOC1110239672.1e-0663.27Show/hide
Query:  MEETYNEMIRANRTGSYSKVPGRADDLPEDGDDLDPPIHLDDYEPAAKN
        MEETYN+M+  NR  S S VPG  DDL +DGDD D P H DDYEP A N
Subjt:  MEETYNEMIRANRTGSYSKVPGRADDLPEDGDDLDPPIHLDDYEPAAKN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCAACCGACAGAATCTACAAACACGGTAGAAGGGAGAGCCTTGAACGGAAACAATGGCGCTCAGCGCGAGCTGGACACCAAAGCGACCGAAGATCAGGCCAGAGC
CGAGCAGGAGGTGAAGCCACCTCGGAGGGCCGCACCTGCTGCGGACCCTAAGATCCTCGCCACCCTCCAGCGAGGGTTAGATGATATGCGCAACCGAGTGCACACCATGG
AGGAAACATACAATGAGATGATAAGGGCAAACAGAACTGGGTCCTATTCCAAGGTCCCAGGCAGGGCGGACGACCTGCCGGAGGATGGAGATGACTTGGATCCACCCATC
CACCTTGATGACTATGAGCCTGCTGCAAAAAACAAAGGGATTGATTATAGTCTGAGGGATCACGACCTTCAGAAGCACCTTGTCGATAAGGAGAGGAAGGCCTCACAGGG
CCAAGGGATCTCTTCATCCTGCTCTAAAAAATACTCGAATTCCAACCTCAAGGCCCAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTCAACCGACAGAATCTACAAACACGGTAGAAGGGAGAGCCTTGAACGGAAACAATGGCGCTCAGCGCGAGCTGGACACCAAAGCGACCGAAGATCAGGCCAGAGC
CGAGCAGGAGGTGAAGCCACCTCGGAGGGCCGCACCTGCTGCGGACCCTAAGATCCTCGCCACCCTCCAGCGAGGGTTAGATGATATGCGCAACCGAGTGCACACCATGG
AGGAAACATACAATGAGATGATAAGGGCAAACAGAACTGGGTCCTATTCCAAGGTCCCAGGCAGGGCGGACGACCTGCCGGAGGATGGAGATGACTTGGATCCACCCATC
CACCTTGATGACTATGAGCCTGCTGCAAAAAACAAAGGGATTGATTATAGTCTGAGGGATCACGACCTTCAGAAGCACCTTGTCGATAAGGAGAGGAAGGCCTCACAGGG
CCAAGGGATCTCTTCATCCTGCTCTAAAAAATACTCGAATTCCAACCTCAAGGCCCAGTGA
Protein sequenceShow/hide protein sequence
MVQPTESTNTVEGRALNGNNGAQRELDTKATEDQARAEQEVKPPRRAAPAADPKILATLQRGLDDMRNRVHTMEETYNEMIRANRTGSYSKVPGRADDLPEDGDDLDPPI
HLDDYEPAAKNKGIDYSLRDHDLQKHLVDKERKASQGQGISSSCSKKYSNSNLKAQ