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Moc02g25410 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc02g25410
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionUnknown protein
Genome locationchr2:18136873..18138466
RNA-Seq ExpressionMoc02g25410
SyntenyMoc02g25410
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR022546 - Uncharacterised protein family Ycf68


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050839.1 putative chloroplast RF68 [Cucumis melo var. makuwa]3.1e-4365.36Show/hide
Query:  DHLGSSLLENPYIPYPYVDNYLSSTGLG-------------------------------------LKKDLRVSRVGPGGFLNAFFFLLIGVISQILAMIR
        DHLGSSLLENPYIPY Y+D+YLSS GLG                                     LKKDLRVS+VGPGGFLNAFFFLLIGVISQ LAM+R
Subjt:  DHLGSSLLENPYIPYPYVDNYLSSTGLG-------------------------------------LKKDLRVSRVGPGGFLNAFFFLLIGVISQILAMIR

Query:  KKGGTSTLGERSTTESCAMIYFTGEVSGSSLGWPSYAKEKNKRIEEASDSFMQ
        KKGGTSTLG  ST +SCAMIYF GEVS SS GWPSYAKEKNKRI++ASDSFMQ
Subjt:  KKGGTSTLGERSTTESCAMIYFTGEVSGSSLGWPSYAKEKNKRIEEASDSFMQ

KAG5070513.1 hypothetical protein JHK85_002890 [Glycine max]5.4e-3273.33Show/hide
Query:  MGAGHARSSYLNRKEGDAEGRASDWSEVEDRWGDSGEIQCRSNF--LFTREIRTVR--GDHLGSSLLENPYIPYPYVDNYLSSTGLGLKKDLRVSRVGPG
        MGAGHARS YLNRKEGDAEGRASDWSEV  R  D G IQ RSN    F+  + + R  GDH GSSLLEN YIPY Y+D+YLSST  GLKKDLRVSRV PG
Subjt:  MGAGHARSSYLNRKEGDAEGRASDWSEVEDRWGDSGEIQCRSNF--LFTREIRTVR--GDHLGSSLLENPYIPYPYVDNYLSSTGLGLKKDLRVSRVGPG

Query:  GFLNAFFFLLIGVISQILAM
        G LNAF FLLIGVISQ LAM
Subjt:  GFLNAFFFLLIGVISQILAM

KAG6790056.1 hypothetical protein POTOM_006202 [Populus tomentosa]2.5e-3773.95Show/hide
Query:  GLGLKKDLRVSRVGPGGFLNAFFFLLIGVISQILAMIRKKGGTSTLGERSTTESCAMIYFTGEVSGSSLGWPSYAKEKNKRIEEASDSFMQTPLGSGGYS
        G GLKKDLRVS+VGP G L   FFLLIGVIS+ LAM+RKKG TSTLGER+  +SCAMI+FT +V  SSLGWPS AKEKN RI+EASDSF+  PL S GYS
Subjt:  GLGLKKDLRVSRVGPGGFLNAFFFLLIGVISQILAMIRKKGGTSTLGERSTTESCAMIYFTGEVSGSSLGWPSYAKEKNKRIEEASDSFMQTPLGSGGYS

Query:  SVGRASLLQLGCCDYGLDV
         VGRAS LQLG CDYGLDV
Subjt:  SVGRASLLQLGCCDYGLDV

KZV53052.1 hypothetical protein F511_23525 [Dorcoceras hygrometricum]2.2e-4155.34Show/hide
Query:  EDRWGDSGEIQCRSNF--LFTREIRTVR--GDHLGSSLLENPYIPYPYVDNYLSSTGL----------------------------------GLKKDLRV
        E +W   G I+ RSN    F   + + R  GDH GSSLLENPYIPY  +++YLSSTGL                                   LKKDLRV
Subjt:  EDRWGDSGEIQCRSNF--LFTREIRTVR--GDHLGSSLLENPYIPYPYVDNYLSSTGL----------------------------------GLKKDLRV

Query:  SRVGPGGFLNAFFFLLIGVISQILAMIRKKGGTSTLGERSTTESCAMIYFTGEVSGSSLGWPSYAKEKNKRIEEASDSFMQTPLGSGGYSSVGRASLLQL
        SRVGPGG LNAFFFLLIGVISQILA +RKKGGTSTLGERSTTE C +         S    P+ A  K  RIEEASD FM  PLGSGGYSSVGRA LLQL
Subjt:  SRVGPGGFLNAFFFLLIGVISQILAMIRKKGGTSTLGERSTTESCAMIYFTGEVSGSSLGWPSYAKEKNKRIEEASDSFMQTPLGSGGYSSVGRASLLQL

Query:  GCCDYG
        G CDYG
Subjt:  GCCDYG

TYK08512.1 putative chloroplast RF68 [Cucumis melo var. makuwa]1.6e-4465.19Show/hide
Query:  DHLGSSLLENPYIPYPYVDNYLSSTGLG-------------------------------------LKKDLRVSRVGPGGFLNAFFFLLIGVISQILAMIR
        DHLGSSLLENPYIPY Y+D+YLSS GLG                                     LKKDLRVS+VGPGGFLNAFFFLLIGVISQ LAM+R
Subjt:  DHLGSSLLENPYIPYPYVDNYLSSTGLG-------------------------------------LKKDLRVSRVGPGGFLNAFFFLLIGVISQILAMIR

Query:  KKGGTSTLGERSTTESCAMIYFTGEVSGSSLGWPSYAKEKNKRIEEASDSFMQTPLGS
        KKGGTSTLG  ST +SCAMIYF GEVS SS GWPSYAKEKNKRI++ASDSFMQ  LGS
Subjt:  KKGGTSTLGERSTTESCAMIYFTGEVSGSSLGWPSYAKEKNKRIEEASDSFMQTPLGS

TrEMBL top hitse value%identityAlignment
A0A2Z7D0R2 Uncharacterized protein ycf681.1e-4155.34Show/hide
Query:  EDRWGDSGEIQCRSNF--LFTREIRTVR--GDHLGSSLLENPYIPYPYVDNYLSSTGL----------------------------------GLKKDLRV
        E +W   G I+ RSN    F   + + R  GDH GSSLLENPYIPY  +++YLSSTGL                                   LKKDLRV
Subjt:  EDRWGDSGEIQCRSNF--LFTREIRTVR--GDHLGSSLLENPYIPYPYVDNYLSSTGL----------------------------------GLKKDLRV

Query:  SRVGPGGFLNAFFFLLIGVISQILAMIRKKGGTSTLGERSTTESCAMIYFTGEVSGSSLGWPSYAKEKNKRIEEASDSFMQTPLGSGGYSSVGRASLLQL
        SRVGPGG LNAFFFLLIGVISQILA +RKKGGTSTLGERSTTE C +         S    P+ A  K  RIEEASD FM  PLGSGGYSSVGRA LLQL
Subjt:  SRVGPGGFLNAFFFLLIGVISQILAMIRKKGGTSTLGERSTTESCAMIYFTGEVSGSSLGWPSYAKEKNKRIEEASDSFMQTPLGSGGYSSVGRASLLQL

Query:  GCCDYG
        G CDYG
Subjt:  GCCDYG

A0A4D6NMF9 Uncharacterized protein ycf682.7e-2964.86Show/hide
Query:  MGAGHARSSYLNRKEGDAEGRASDWSEV---------------------------EDRWGDSGEIQCRSNFLFTREIRTVRGDHLGSSLLENPYIPYPYV
        MGAGHA+S YLN KEGDAEGRA DWSEV                           EDRWGDSGEIQCRSNFLFTR IR +RGDH GSSLLEN YIPY Y+
Subjt:  MGAGHARSSYLNRKEGDAEGRASDWSEV---------------------------EDRWGDSGEIQCRSNFLFTREIRTVRGDHLGSSLLENPYIPYPYV

Query:  DNYLSSTGLGL
        D+YLSSTGLGL
Subjt:  DNYLSSTGLGL

A0A4D6NSC2 Uncharacterized protein family Ycf11.7e-3153.25Show/hide
Query:  WGDSGEIQCRSNFLFTREIRTVRGDHLGSSLLENPYIPYPYVDNYLSSTGLGL---KKDLRVSRVGPGGFLNAFFFLLIGVISQILAMI-----------
        WGDSGEIQCRSNFLFTR IR +RGDH GSSLLEN YIPY Y+D+YLSSTGLGL   +K+   + V            ++G +S+ L              
Subjt:  WGDSGEIQCRSNFLFTREIRTVRGDHLGSSLLENPYIPYPYVDNYLSSTGLGL---KKDLRVSRVGPGGFLNAFFFLLIGVISQILAMI-----------

Query:  -RKKGGTSTLGERSTTESCAMIYFTGEVSGSSLGWPSYAKEKNKRIEEASDSFM
         +++GGTSTLGERS     AMIYFTGEVSGSS GWPS  +EKN++  + + S M
Subjt:  -RKKGGTSTLGERSTTESCAMIYFTGEVSGSSLGWPSYAKEKNKRIEEASDSFM

A0A5A7UBD6 Uncharacterized protein ycf681.5e-4365.36Show/hide
Query:  DHLGSSLLENPYIPYPYVDNYLSSTGLG-------------------------------------LKKDLRVSRVGPGGFLNAFFFLLIGVISQILAMIR
        DHLGSSLLENPYIPY Y+D+YLSS GLG                                     LKKDLRVS+VGPGGFLNAFFFLLIGVISQ LAM+R
Subjt:  DHLGSSLLENPYIPYPYVDNYLSSTGLG-------------------------------------LKKDLRVSRVGPGGFLNAFFFLLIGVISQILAMIR

Query:  KKGGTSTLGERSTTESCAMIYFTGEVSGSSLGWPSYAKEKNKRIEEASDSFMQ
        KKGGTSTLG  ST +SCAMIYF GEVS SS GWPSYAKEKNKRI++ASDSFMQ
Subjt:  KKGGTSTLGERSTTESCAMIYFTGEVSGSSLGWPSYAKEKNKRIEEASDSFMQ

A0A5D3CB41 Uncharacterized protein ycf687.9e-4565.19Show/hide
Query:  DHLGSSLLENPYIPYPYVDNYLSSTGLG-------------------------------------LKKDLRVSRVGPGGFLNAFFFLLIGVISQILAMIR
        DHLGSSLLENPYIPY Y+D+YLSS GLG                                     LKKDLRVS+VGPGGFLNAFFFLLIGVISQ LAM+R
Subjt:  DHLGSSLLENPYIPYPYVDNYLSSTGLG-------------------------------------LKKDLRVSRVGPGGFLNAFFFLLIGVISQILAMIR

Query:  KKGGTSTLGERSTTESCAMIYFTGEVSGSSLGWPSYAKEKNKRIEEASDSFMQTPLGS
        KKGGTSTLG  ST +SCAMIYF GEVS SS GWPSYAKEKNKRI++ASDSFMQ  LGS
Subjt:  KKGGTSTLGERSTTESCAMIYFTGEVSGSSLGWPSYAKEKNKRIEEASDSFMQTPLGS

SwissProt top hitse value%identityAlignment
P52807 Uncharacterized protein ycf683.8e-0480Show/hide
Query:  HLGSSLLENPYIPYPYVDNYLSSTG
        HLGSSLLENPYIPY  +D YLS TG
Subjt:  HLGSSLLENPYIPYPYVDNYLSSTG

Q49KT9 Uncharacterized protein ycf684.1e-0659.62Show/hide
Query:  GEIQCRSNF--LFTREIRTVR--GDHLGSSLLENPYIPYPYVDNYLSSTGLG
        G IQ RSN    F   + + R  GD  GSSLLENPYIPY  +D+YLSSTGLG
Subjt:  GEIQCRSNF--LFTREIRTVR--GDHLGSSLLENPYIPYPYVDNYLSSTGLG

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGCTGGCCATGCCCGAAGTAGTTACCTTAACCGCAAGGAGGGGGATGCCGAAGGCAGGGCTAGTGACTGGAGTGAAGTGGAGGATAGATGGGGCGATTCAGGTGA
GATCCAATGTAGATCCAACTTTCTATTCACTCGTGAGATCCGGACGGTCAGGGGGGACCACCTCGGCTCCTCTCTTCTCGAGAATCCATACATCCCTTATCCGTATGTGG
ACAACTATCTCTCGAGCACAGGCTTAGGTTTGAAAAAGGATCTTAGAGTGTCTAGGGTTGGGCCAGGAGGGTTTCTTAACGCCTTCTTTTTTCTTCTCATCGGAGTTATT
TCACAAATACTTGCCATGATAAGGAAGAAGGGGGGAACAAGCACGCTTGGAGAGCGCAGTACAACGGAGAGTTGTGCGATGATTTACTTCACGGGCGAGGTCTCTGGTTC
AAGTCTAGGATGGCCCAGCTACGCTAAGGAAAAGAATAAAAGAATAGAAGAAGCATCTGACTCCTTCATGCAGACCCCACTTGGCTCAGGGGGATATAGCTCAGTTGGTA
GAGCTTCGCTCTTGCAATTGGGTTGTTGCGATTACGGGTTGGATGTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGAGCTGGCCATGCCCGAAGTAGTTACCTTAACCGCAAGGAGGGGGATGCCGAAGGCAGGGCTAGTGACTGGAGTGAAGTGGAGGATAGATGGGGCGATTCAGGTGA
GATCCAATGTAGATCCAACTTTCTATTCACTCGTGAGATCCGGACGGTCAGGGGGGACCACCTCGGCTCCTCTCTTCTCGAGAATCCATACATCCCTTATCCGTATGTGG
ACAACTATCTCTCGAGCACAGGCTTAGGTTTGAAAAAGGATCTTAGAGTGTCTAGGGTTGGGCCAGGAGGGTTTCTTAACGCCTTCTTTTTTCTTCTCATCGGAGTTATT
TCACAAATACTTGCCATGATAAGGAAGAAGGGGGGAACAAGCACGCTTGGAGAGCGCAGTACAACGGAGAGTTGTGCGATGATTTACTTCACGGGCGAGGTCTCTGGTTC
AAGTCTAGGATGGCCCAGCTACGCTAAGGAAAAGAATAAAAGAATAGAAGAAGCATCTGACTCCTTCATGCAGACCCCACTTGGCTCAGGGGGATATAGCTCAGTTGGTA
GAGCTTCGCTCTTGCAATTGGGTTGTTGCGATTACGGGTTGGATGTCTAA
Protein sequenceShow/hide protein sequence
MGAGHARSSYLNRKEGDAEGRASDWSEVEDRWGDSGEIQCRSNFLFTREIRTVRGDHLGSSLLENPYIPYPYVDNYLSSTGLGLKKDLRVSRVGPGGFLNAFFFLLIGVI
SQILAMIRKKGGTSTLGERSTTESCAMIYFTGEVSGSSLGWPSYAKEKNKRIEEASDSFMQTPLGSGGYSSVGRASLLQLGCCDYGLDV