CuGenDBv2

Gene ID	Moc02g25630
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Photosystem II protein D1
Genome location	chr2:18286229..18292388
RNA-Seq Expression	Moc02g25630
Synteny	Moc02g25630
Gene Ontology terms	GO:0009635 - response to herbicide (biological process) GO:0009772 - photosynthetic electron transport in photosystem II (biological process) GO:0018298 - protein-chromophore linkage (biological process) GO:0009523 - photosystem II (cellular component) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0005506 - iron ion binding (molecular function) GO:0010242 - oxygen evolving activity (molecular function) GO:0016168 - chlorophyll binding (molecular function) GO:0016682 - oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor (molecular function) GO:0045156 - electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity (molecular function)
InterPro domains	IPR000484 - Photosynthetic reaction centre, L/M IPR005867 - Photosystem II protein D1 IPR036854 - Photosystem II protein D1/D2 superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

AGU12570.1 photosystem II D1 subunit, partial [Petrocoptis pyrenaica]

1.0e-152

94.79

Show/hide

Query:  MTAILERRESESLWGRFCNWITSTKNRLYIGWFGVLMIPTLLTATSVFIITFIAAPPIDIDGISEPVSGSLFYGNNIISGAIIPTSAAIGLHFYSIWEAA
        MTAILERRESESLWGRFCNWITST+NRLYIGWFGVLMIPTLLTATSVFII FIAAPP+DIDGI EPVSGSL YGNNIISGAIIPTSAAIGLHFY IWEAA
Subjt:  MTAILERRESESLWGRFCNWITSTKNRLYIGWFGVLMIPTLLTATSVFIITFIAAPPIDIDGISEPVSGSLFYGNNIISGAIIPTSAAIGLHFYSIWEAA

Query:  SVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMCPWIAVAYSAPVAAATTVFLIYPIGKGSFYDGMPLGISGTFNFMIVFQTEHNILMHPFHML
        SVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGM PWIAVAYSAPVAAAT VFLIYPIG+GSF DGMPLGISGTFNFMIVFQ EHNILMHPFHML
Subjt:  SVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMCPWIAVAYSAPVAAATTVFLIYPIGKGSFYDGMPLGISGTFNFMIVFQTEHNILMHPFHML

Query:  AVAGVFGSSLFSAMHGSLVTSSLIRETTENESANEGYIFGQEEETYNIVAAHGYFGRFIFQYASFNNSRSLHFFLAAWPVVGIWFTAL
         VAGVFG SLFSAMHGSLVTSSLIRETTENESANEGY FGQEEETYNIVAAHGYFGR IFQYASFNNSRSLHFFLAAWPVVGIWFTAL
Subjt:  AVAGVFGSSLFSAMHGSLVTSSLIRETTENESANEGYIFGQEEETYNIVAAHGYFGRFIFQYASFNNSRSLHFFLAAWPVVGIWFTAL

Q33282.1 RecName: Full=Photosystem II protein D1; Short=PSII D1 protein; AltName: Full=Photosystem II Q(B) protein; Flags: Precursor [Vigna unguiculata]

4.5e-153

95.14

Show/hide

Query:  MTAILERRESESLWGRFCNWITSTKNRLYIGWFGVLMIPTLLTATSVFIITFIAAPPIDIDGISEPVSGSLFYGNNIISGAIIPTSAAIGLHFYSIWEAA
        MTAILERRESESLWGRFCNWITST+NRLYIGWFGVLMIPTLLTATSVFII FIAAPP+DIDGI EPVSGSL YGNNIISGAIIPTSAAIGLHFY IWEAA
Subjt:  MTAILERRESESLWGRFCNWITSTKNRLYIGWFGVLMIPTLLTATSVFIITFIAAPPIDIDGISEPVSGSLFYGNNIISGAIIPTSAAIGLHFYSIWEAA

Query:  SVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMCPWIAVAYSAPVAAATTVFLIYPIGKGSFYDGMPLGISGTFNFMIVFQTEHNILMHPFHML
        SVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGM PWIAVAYSAPVAAAT VFLIYPIG+GSF DGMPLGISGTFNFMIVFQ EHNILMHPFHML
Subjt:  SVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMCPWIAVAYSAPVAAATTVFLIYPIGKGSFYDGMPLGISGTFNFMIVFQTEHNILMHPFHML

Query:  AVAGVFGSSLFSAMHGSLVTSSLIRETTENESANEGYIFGQEEETYNIVAAHGYFGRFIFQYASFNNSRSLHFFLAAWPVVGIWFTAL
         VAGVFGSSLFSAMHGSLVTSSLIRETTENESANEGY FGQEEETYNIVAAHGYFGR IFQYASFNNSRSLHFFLAAWPVVGIWFTAL
Subjt:  AVAGVFGSSLFSAMHGSLVTSSLIRETTENESANEGYIFGQEEETYNIVAAHGYFGRFIFQYASFNNSRSLHFFLAAWPVVGIWFTAL

QPZ49150.1 photosystem II P680 reaction center D1 protein [Delphinium yunnanense]

7.8e-153

94.44

Show/hide

Query:  MTAILERRESESLWGRFCNWITSTKNRLYIGWFGVLMIPTLLTATSVFIITFIAAPPIDIDGISEPVSGSLFYGNNIISGAIIPTSAAIGLHFYSIWEAA
        MTAILERRES+SLWGRFCNW+TST+NRLYIGWFGVLMIPTLLTATSVFII FIAAPP+DIDGI EPVSGSLFYGNNIISGAIIPTSAAIGLHFY IWEAA
Subjt:  MTAILERRESESLWGRFCNWITSTKNRLYIGWFGVLMIPTLLTATSVFIITFIAAPPIDIDGISEPVSGSLFYGNNIISGAIIPTSAAIGLHFYSIWEAA

Query:  SVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMCPWIAVAYSAPVAAATTVFLIYPIGKGSFYDGMPLGISGTFNFMIVFQTEHNILMHPFHML
        SVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGM PWIAVAYSAPVAAAT VFLIYPIG+GSF DGMPLGISGTFNFMIVFQ EHNILMHPFHML
Subjt:  SVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMCPWIAVAYSAPVAAATTVFLIYPIGKGSFYDGMPLGISGTFNFMIVFQTEHNILMHPFHML

Query:  AVAGVFGSSLFSAMHGSLVTSSLIRETTENESANEGYIFGQEEETYNIVAAHGYFGRFIFQYASFNNSRSLHFFLAAWPVVGIWFTAL
         VAGVFG SLFSAMHGSLVTSSLIRETTENESANEGY FGQEEETYNIVAAHGYFGR IFQYASFNNSRSLHFFLAAWPVVGIWFTAL
Subjt:  AVAGVFGSSLFSAMHGSLVTSSLIRETTENESANEGYIFGQEEETYNIVAAHGYFGRFIFQYASFNNSRSLHFFLAAWPVVGIWFTAL

YP_009670951.1 photosystem II protein D1 [Passiflora arbelaezii]

2.7e-153

95.14

Show/hide

Query:  MTAILERRESESLWGRFCNWITSTKNRLYIGWFGVLMIPTLLTATSVFIITFIAAPPIDIDGISEPVSGSLFYGNNIISGAIIPTSAAIGLHFYSIWEAA
        MTAILERRESESLWGRFCNWITST+NRLYIGWFGVLMIPTLLTATSVFII FIAAPP+DIDGI EPVSGSLFYGNNIISGAIIPTSAAIGLHFY IWEAA
Subjt:  MTAILERRESESLWGRFCNWITSTKNRLYIGWFGVLMIPTLLTATSVFIITFIAAPPIDIDGISEPVSGSLFYGNNIISGAIIPTSAAIGLHFYSIWEAA

Query:  SVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMCPWIAVAYSAPVAAATTVFLIYPIGKGSFYDGMPLGISGTFNFMIVFQTEHNILMHPFHML
        SVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGM PWIAVAYSAPVAAAT VFLIYPIG+GSF DGMPLGISGTFNFMIVFQ EHNILMHPFHML
Subjt:  SVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMCPWIAVAYSAPVAAATTVFLIYPIGKGSFYDGMPLGISGTFNFMIVFQTEHNILMHPFHML

Query:  AVAGVFGSSLFSAMHGSLVTSSLIRETTENESANEGYIFGQEEETYNIVAAHGYFGRFIFQYASFNNSRSLHFFLAAWPVVGIWFTAL
         VAGVFG SLFSAMHGSLVTSSLIRETTENESANEGY FGQEEETYNIVAAHGYFGR IFQYASFNNSRSLHFFLAAWPVVGIWFTAL
Subjt:  AVAGVFGSSLFSAMHGSLVTSSLIRETTENESANEGYIFGQEEETYNIVAAHGYFGRFIFQYASFNNSRSLHFFLAAWPVVGIWFTAL

YP_009735626.1 photosystem II protein D1 [Juglans microcarpa]

1.0e-152

94.79

Show/hide

Query:  MTAILERRESESLWGRFCNWITSTKNRLYIGWFGVLMIPTLLTATSVFIITFIAAPPIDIDGISEPVSGSLFYGNNIISGAIIPTSAAIGLHFYSIWEAA
        MTAILERRESESLWGRFCNWITST+NRLYIGWFGVLMIPTLLTATSVFII+FIAAPP+DIDGI EPVSGSL YGNNIISGAIIPTSAAIGLHFY IWEAA
Subjt:  MTAILERRESESLWGRFCNWITSTKNRLYIGWFGVLMIPTLLTATSVFIITFIAAPPIDIDGISEPVSGSLFYGNNIISGAIIPTSAAIGLHFYSIWEAA

Query:  SVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMCPWIAVAYSAPVAAATTVFLIYPIGKGSFYDGMPLGISGTFNFMIVFQTEHNILMHPFHML
        SVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGM PWIAVAYSAPVAAAT VFLIYPIG+GSF DGMPLGISGTFNFMIVFQ EHNILMHPFHML
Subjt:  SVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMCPWIAVAYSAPVAAATTVFLIYPIGKGSFYDGMPLGISGTFNFMIVFQTEHNILMHPFHML

Query:  AVAGVFGSSLFSAMHGSLVTSSLIRETTENESANEGYIFGQEEETYNIVAAHGYFGRFIFQYASFNNSRSLHFFLAAWPVVGIWFTAL
         VAGVFG SLFSAMHGSLVTSSLIRETTENESANEGY FGQEEETYNIVAAHGYFGR IFQYASFNNSRSLHFFLAAWPVVGIWFTAL
Subjt:  AVAGVFGSSLFSAMHGSLVTSSLIRETTENESANEGYIFGQEEETYNIVAAHGYFGRFIFQYASFNNSRSLHFFLAAWPVVGIWFTAL

TrEMBL top hits

e value

%identity

Alignment

A0A2L0VCP4 Photosystem II protein D1

6.4e-153

94.79

Show/hide

Query:  MTAILERRESESLWGRFCNWITSTKNRLYIGWFGVLMIPTLLTATSVFIITFIAAPPIDIDGISEPVSGSLFYGNNIISGAIIPTSAAIGLHFYSIWEAA
        MTAILERRESESLWGRFCNWITST+NRLYIGWFGVLMIPTLLTATSVFII FIAAPP+DIDGI EPVSGSL YGNNIISGAIIPTSAAIGLHFY IWEAA
Subjt:  MTAILERRESESLWGRFCNWITSTKNRLYIGWFGVLMIPTLLTATSVFIITFIAAPPIDIDGISEPVSGSLFYGNNIISGAIIPTSAAIGLHFYSIWEAA

Query:  SVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMCPWIAVAYSAPVAAATTVFLIYPIGKGSFYDGMPLGISGTFNFMIVFQTEHNILMHPFHML
        SVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGM PWIAVAYSAPVAAAT VFLIYPIG+GSF DGMPLGISGTFNFMIVFQ EHNILMHPFHML
Subjt:  SVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMCPWIAVAYSAPVAAATTVFLIYPIGKGSFYDGMPLGISGTFNFMIVFQTEHNILMHPFHML

Query:  AVAGVFGSSLFSAMHGSLVTSSLIRETTENESANEGYIFGQEEETYNIVAAHGYFGRFIFQYASFNNSRSLHFFLAAWPVVGIWFTAL
         VAGVFG SLFSAMHGSLVTSSLIRETTENESANEGY FGQEEETYNIVAAHGYFGR IFQYASFNNSRSLHFFLAAWPVVGIWFTAL
Subjt:  AVAGVFGSSLFSAMHGSLVTSSLIRETTENESANEGYIFGQEEETYNIVAAHGYFGRFIFQYASFNNSRSLHFFLAAWPVVGIWFTAL

A0A4Y5QFJ2 Photosystem II protein D1

1.3e-153

95.14

Show/hide

Query:  MTAILERRESESLWGRFCNWITSTKNRLYIGWFGVLMIPTLLTATSVFIITFIAAPPIDIDGISEPVSGSLFYGNNIISGAIIPTSAAIGLHFYSIWEAA
        MTAILERRESESLWGRFCNWITST+NRLYIGWFGVLMIPTLLTATSVFII FIAAPP+DIDGI EPVSGSLFYGNNIISGAIIPTSAAIGLHFY IWEAA
Subjt:  MTAILERRESESLWGRFCNWITSTKNRLYIGWFGVLMIPTLLTATSVFIITFIAAPPIDIDGISEPVSGSLFYGNNIISGAIIPTSAAIGLHFYSIWEAA

Query:  SVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMCPWIAVAYSAPVAAATTVFLIYPIGKGSFYDGMPLGISGTFNFMIVFQTEHNILMHPFHML
        SVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGM PWIAVAYSAPVAAAT VFLIYPIG+GSF DGMPLGISGTFNFMIVFQ EHNILMHPFHML
Subjt:  SVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMCPWIAVAYSAPVAAATTVFLIYPIGKGSFYDGMPLGISGTFNFMIVFQTEHNILMHPFHML

Query:  AVAGVFGSSLFSAMHGSLVTSSLIRETTENESANEGYIFGQEEETYNIVAAHGYFGRFIFQYASFNNSRSLHFFLAAWPVVGIWFTAL
         VAGVFG SLFSAMHGSLVTSSLIRETTENESANEGY FGQEEETYNIVAAHGYFGR IFQYASFNNSRSLHFFLAAWPVVGIWFTAL
Subjt:  AVAGVFGSSLFSAMHGSLVTSSLIRETTENESANEGYIFGQEEETYNIVAAHGYFGRFIFQYASFNNSRSLHFFLAAWPVVGIWFTAL

A0A7D6C0R9 Photosystem II protein D1

4.9e-153

94.79

Show/hide

Query:  MTAILERRESESLWGRFCNWITSTKNRLYIGWFGVLMIPTLLTATSVFIITFIAAPPIDIDGISEPVSGSLFYGNNIISGAIIPTSAAIGLHFYSIWEAA
        MTAILERRESESLWGRFCNWITST+NRLYIGWFGVLMIPTLLTATSVFII+FIAAPP+DIDGI EPVSGSL YGNNIISGAIIPTSAAIGLHFY IWEAA
Subjt:  MTAILERRESESLWGRFCNWITSTKNRLYIGWFGVLMIPTLLTATSVFIITFIAAPPIDIDGISEPVSGSLFYGNNIISGAIIPTSAAIGLHFYSIWEAA

Query:  SVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMCPWIAVAYSAPVAAATTVFLIYPIGKGSFYDGMPLGISGTFNFMIVFQTEHNILMHPFHML
        SVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGM PWIAVAYSAPVAAAT VFLIYPIG+GSF DGMPLGISGTFNFMIVFQ EHNILMHPFHML
Subjt:  SVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMCPWIAVAYSAPVAAATTVFLIYPIGKGSFYDGMPLGISGTFNFMIVFQTEHNILMHPFHML

Query:  AVAGVFGSSLFSAMHGSLVTSSLIRETTENESANEGYIFGQEEETYNIVAAHGYFGRFIFQYASFNNSRSLHFFLAAWPVVGIWFTAL
         VAGVFG SLFSAMHGSLVTSSLIRETTENESANEGY FGQEEETYNIVAAHGYFGR IFQYASFNNSRSLHFFLAAWPVVGIWFTAL
Subjt:  AVAGVFGSSLFSAMHGSLVTSSLIRETTENESANEGYIFGQEEETYNIVAAHGYFGRFIFQYASFNNSRSLHFFLAAWPVVGIWFTAL

A0A7T3U2T9 Photosystem II P680 reaction center D1 protein

3.8e-153

94.44

Show/hide

Query:  MTAILERRESESLWGRFCNWITSTKNRLYIGWFGVLMIPTLLTATSVFIITFIAAPPIDIDGISEPVSGSLFYGNNIISGAIIPTSAAIGLHFYSIWEAA
        MTAILERRES+SLWGRFCNW+TST+NRLYIGWFGVLMIPTLLTATSVFII FIAAPP+DIDGI EPVSGSLFYGNNIISGAIIPTSAAIGLHFY IWEAA
Subjt:  MTAILERRESESLWGRFCNWITSTKNRLYIGWFGVLMIPTLLTATSVFIITFIAAPPIDIDGISEPVSGSLFYGNNIISGAIIPTSAAIGLHFYSIWEAA

Query:  SVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMCPWIAVAYSAPVAAATTVFLIYPIGKGSFYDGMPLGISGTFNFMIVFQTEHNILMHPFHML
        SVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGM PWIAVAYSAPVAAAT VFLIYPIG+GSF DGMPLGISGTFNFMIVFQ EHNILMHPFHML
Subjt:  SVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMCPWIAVAYSAPVAAATTVFLIYPIGKGSFYDGMPLGISGTFNFMIVFQTEHNILMHPFHML

Query:  AVAGVFGSSLFSAMHGSLVTSSLIRETTENESANEGYIFGQEEETYNIVAAHGYFGRFIFQYASFNNSRSLHFFLAAWPVVGIWFTAL
         VAGVFG SLFSAMHGSLVTSSLIRETTENESANEGY FGQEEETYNIVAAHGYFGR IFQYASFNNSRSLHFFLAAWPVVGIWFTAL
Subjt:  AVAGVFGSSLFSAMHGSLVTSSLIRETTENESANEGYIFGQEEETYNIVAAHGYFGRFIFQYASFNNSRSLHFFLAAWPVVGIWFTAL

T1WD15 Photosystem II protein D1 (Fragment)

4.9e-153

94.79

Show/hide

Query:  MTAILERRESESLWGRFCNWITSTKNRLYIGWFGVLMIPTLLTATSVFIITFIAAPPIDIDGISEPVSGSLFYGNNIISGAIIPTSAAIGLHFYSIWEAA
        MTAILERRESESLWGRFCNWITST+NRLYIGWFGVLMIPTLLTATSVFII FIAAPP+DIDGI EPVSGSL YGNNIISGAIIPTSAAIGLHFY IWEAA
Subjt:  MTAILERRESESLWGRFCNWITSTKNRLYIGWFGVLMIPTLLTATSVFIITFIAAPPIDIDGISEPVSGSLFYGNNIISGAIIPTSAAIGLHFYSIWEAA

Query:  SVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMCPWIAVAYSAPVAAATTVFLIYPIGKGSFYDGMPLGISGTFNFMIVFQTEHNILMHPFHML
        SVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGM PWIAVAYSAPVAAAT VFLIYPIG+GSF DGMPLGISGTFNFMIVFQ EHNILMHPFHML
Subjt:  SVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMCPWIAVAYSAPVAAATTVFLIYPIGKGSFYDGMPLGISGTFNFMIVFQTEHNILMHPFHML

Query:  AVAGVFGSSLFSAMHGSLVTSSLIRETTENESANEGYIFGQEEETYNIVAAHGYFGRFIFQYASFNNSRSLHFFLAAWPVVGIWFTAL
         VAGVFG SLFSAMHGSLVTSSLIRETTENESANEGY FGQEEETYNIVAAHGYFGR IFQYASFNNSRSLHFFLAAWPVVGIWFTAL
Subjt:  AVAGVFGSSLFSAMHGSLVTSSLIRETTENESANEGYIFGQEEETYNIVAAHGYFGRFIFQYASFNNSRSLHFFLAAWPVVGIWFTAL

SwissProt top hits

e value

%identity

Alignment

A4QJI0 Photosystem II protein D1

1.7e-155

94.79

Show/hide

Query:  MTAILERRESESLWGRFCNWITSTKNRLYIGWFGVLMIPTLLTATSVFIITFIAAPPIDIDGISEPVSGSLFYGNNIISGAIIPTSAAIGLHFYSIWEAA
        MTAILERRESESLWGRFCNWITST+NRLYIGWFGVLMIPTLLTATSVFII FIAAPP+DIDGI EPVSGSL YGNNIISGAIIPTSAAIGLHFY IWEAA
Subjt:  MTAILERRESESLWGRFCNWITSTKNRLYIGWFGVLMIPTLLTATSVFIITFIAAPPIDIDGISEPVSGSLFYGNNIISGAIIPTSAAIGLHFYSIWEAA

Query:  SVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMCPWIAVAYSAPVAAATTVFLIYPIGKGSFYDGMPLGISGTFNFMIVFQTEHNILMHPFHML
        SVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGM PWIAVAYSAPVAAAT VFLIYPIG+GSF DGMPLGISGTFNFMIVFQ EHNILMHPFHML
Subjt:  SVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMCPWIAVAYSAPVAAATTVFLIYPIGKGSFYDGMPLGISGTFNFMIVFQTEHNILMHPFHML

Query:  AVAGVFGSSLFSAMHGSLVTSSLIRETTENESANEGYIFGQEEETYNIVAAHGYFGRFIFQYASFNNSRSLHFFLAAWPVVGIWFTAL
         VAGVFG SLFSAMHGSLVTSSLIRETTENESANEGY FGQEEETYNIVAAHGYFGR IFQYASFNNSRSLHFFLAAWPVVGIWFTAL
Subjt:  AVAGVFGSSLFSAMHGSLVTSSLIRETTENESANEGYIFGQEEETYNIVAAHGYFGRFIFQYASFNNSRSLHFFLAAWPVVGIWFTAL

A4QJZ9 Photosystem II protein D1

1.7e-155

94.79

Show/hide

Query:  MTAILERRESESLWGRFCNWITSTKNRLYIGWFGVLMIPTLLTATSVFIITFIAAPPIDIDGISEPVSGSLFYGNNIISGAIIPTSAAIGLHFYSIWEAA
        MTAILERRESESLWGRFCNWITST+NRLYIGWFGVLMIPTLLTATSVFII FIAAPP+DIDGI EPVSGSL YGNNIISGAIIPTSAAIGLHFY IWEAA
Subjt:  MTAILERRESESLWGRFCNWITSTKNRLYIGWFGVLMIPTLLTATSVFIITFIAAPPIDIDGISEPVSGSLFYGNNIISGAIIPTSAAIGLHFYSIWEAA

Query:  SVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMCPWIAVAYSAPVAAATTVFLIYPIGKGSFYDGMPLGISGTFNFMIVFQTEHNILMHPFHML
        SVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGM PWIAVAYSAPVAAAT VFLIYPIG+GSF DGMPLGISGTFNFMIVFQ EHNILMHPFHML
Subjt:  SVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMCPWIAVAYSAPVAAATTVFLIYPIGKGSFYDGMPLGISGTFNFMIVFQTEHNILMHPFHML

Query:  AVAGVFGSSLFSAMHGSLVTSSLIRETTENESANEGYIFGQEEETYNIVAAHGYFGRFIFQYASFNNSRSLHFFLAAWPVVGIWFTAL
         VAGVFG SLFSAMHGSLVTSSLIRETTENESANEGY FGQEEETYNIVAAHGYFGR IFQYASFNNSRSLHFFLAAWPVVGIWFTAL
Subjt:  AVAGVFGSSLFSAMHGSLVTSSLIRETTENESANEGYIFGQEEETYNIVAAHGYFGRFIFQYASFNNSRSLHFFLAAWPVVGIWFTAL

P83755 Photosystem II protein D1

1.7e-155

94.79

Show/hide

Query:  MTAILERRESESLWGRFCNWITSTKNRLYIGWFGVLMIPTLLTATSVFIITFIAAPPIDIDGISEPVSGSLFYGNNIISGAIIPTSAAIGLHFYSIWEAA
        MTAILERRESESLWGRFCNWITST+NRLYIGWFGVLMIPTLLTATSVFII FIAAPP+DIDGI EPVSGSL YGNNIISGAIIPTSAAIGLHFY IWEAA
Subjt:  MTAILERRESESLWGRFCNWITSTKNRLYIGWFGVLMIPTLLTATSVFIITFIAAPPIDIDGISEPVSGSLFYGNNIISGAIIPTSAAIGLHFYSIWEAA

Query:  SVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMCPWIAVAYSAPVAAATTVFLIYPIGKGSFYDGMPLGISGTFNFMIVFQTEHNILMHPFHML
        SVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGM PWIAVAYSAPVAAAT VFLIYPIG+GSF DGMPLGISGTFNFMIVFQ EHNILMHPFHML
Subjt:  SVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMCPWIAVAYSAPVAAATTVFLIYPIGKGSFYDGMPLGISGTFNFMIVFQTEHNILMHPFHML

Query:  AVAGVFGSSLFSAMHGSLVTSSLIRETTENESANEGYIFGQEEETYNIVAAHGYFGRFIFQYASFNNSRSLHFFLAAWPVVGIWFTAL
         VAGVFG SLFSAMHGSLVTSSLIRETTENESANEGY FGQEEETYNIVAAHGYFGR IFQYASFNNSRSLHFFLAAWPVVGIWFTAL
Subjt:  AVAGVFGSSLFSAMHGSLVTSSLIRETTENESANEGYIFGQEEETYNIVAAHGYFGRFIFQYASFNNSRSLHFFLAAWPVVGIWFTAL

Q33282 Photosystem II protein D1

6.0e-156

95.14

Show/hide

Query:  MTAILERRESESLWGRFCNWITSTKNRLYIGWFGVLMIPTLLTATSVFIITFIAAPPIDIDGISEPVSGSLFYGNNIISGAIIPTSAAIGLHFYSIWEAA
        MTAILERRESESLWGRFCNWITST+NRLYIGWFGVLMIPTLLTATSVFII FIAAPP+DIDGI EPVSGSL YGNNIISGAIIPTSAAIGLHFY IWEAA
Subjt:  MTAILERRESESLWGRFCNWITSTKNRLYIGWFGVLMIPTLLTATSVFIITFIAAPPIDIDGISEPVSGSLFYGNNIISGAIIPTSAAIGLHFYSIWEAA

Query:  SVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMCPWIAVAYSAPVAAATTVFLIYPIGKGSFYDGMPLGISGTFNFMIVFQTEHNILMHPFHML
        SVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGM PWIAVAYSAPVAAAT VFLIYPIG+GSF DGMPLGISGTFNFMIVFQ EHNILMHPFHML
Subjt:  SVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMCPWIAVAYSAPVAAATTVFLIYPIGKGSFYDGMPLGISGTFNFMIVFQTEHNILMHPFHML

Query:  AVAGVFGSSLFSAMHGSLVTSSLIRETTENESANEGYIFGQEEETYNIVAAHGYFGRFIFQYASFNNSRSLHFFLAAWPVVGIWFTAL
         VAGVFGSSLFSAMHGSLVTSSLIRETTENESANEGY FGQEEETYNIVAAHGYFGR IFQYASFNNSRSLHFFLAAWPVVGIWFTAL
Subjt:  AVAGVFGSSLFSAMHGSLVTSSLIRETTENESANEGYIFGQEEETYNIVAAHGYFGRFIFQYASFNNSRSLHFFLAAWPVVGIWFTAL

Q7FNT3 Photosystem II protein D1

1.7e-155

94.79

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Query:  MTAILERRESESLWGRFCNWITSTKNRLYIGWFGVLMIPTLLTATSVFIITFIAAPPIDIDGISEPVSGSLFYGNNIISGAIIPTSAAIGLHFYSIWEAA
        MTAILERRESESLWGRFCNWITST+NRLYIGWFGVLMIPTLLTATSVFII FIAAPP+DIDGI EPVSGSL YGNNIISGAIIPTSAAIGLHFY IWEAA
Subjt:  MTAILERRESESLWGRFCNWITSTKNRLYIGWFGVLMIPTLLTATSVFIITFIAAPPIDIDGISEPVSGSLFYGNNIISGAIIPTSAAIGLHFYSIWEAA

Query:  SVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMCPWIAVAYSAPVAAATTVFLIYPIGKGSFYDGMPLGISGTFNFMIVFQTEHNILMHPFHML
        SVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGM PWIAVAYSAPVAAAT VFLIYPIG+GSF DGMPLGISGTFNFMIVFQ EHNILMHPFHML
Subjt:  SVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMCPWIAVAYSAPVAAATTVFLIYPIGKGSFYDGMPLGISGTFNFMIVFQTEHNILMHPFHML

Query:  AVAGVFGSSLFSAMHGSLVTSSLIRETTENESANEGYIFGQEEETYNIVAAHGYFGRFIFQYASFNNSRSLHFFLAAWPVVGIWFTAL
         VAGVFG SLFSAMHGSLVTSSLIRETTENESANEGY FGQEEETYNIVAAHGYFGR IFQYASFNNSRSLHFFLAAWPVVGIWFTAL
Subjt:  AVAGVFGSSLFSAMHGSLVTSSLIRETTENESANEGYIFGQEEETYNIVAAHGYFGRFIFQYASFNNSRSLHFFLAAWPVVGIWFTAL

Arabidopsis top hits

e value

%identity

Alignment

ATCG00020.1 photosystem II reaction center protein A

1.2e-156

94.79

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Query:  MTAILERRESESLWGRFCNWITSTKNRLYIGWFGVLMIPTLLTATSVFIITFIAAPPIDIDGISEPVSGSLFYGNNIISGAIIPTSAAIGLHFYSIWEAA
        MTAILERRESESLWGRFCNWITST+NRLYIGWFGVLMIPTLLTATSVFII FIAAPP+DIDGI EPVSGSL YGNNIISGAIIPTSAAIGLHFY IWEAA
Subjt:  MTAILERRESESLWGRFCNWITSTKNRLYIGWFGVLMIPTLLTATSVFIITFIAAPPIDIDGISEPVSGSLFYGNNIISGAIIPTSAAIGLHFYSIWEAA

Query:  SVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMCPWIAVAYSAPVAAATTVFLIYPIGKGSFYDGMPLGISGTFNFMIVFQTEHNILMHPFHML
        SVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGM PWIAVAYSAPVAAAT VFLIYPIG+GSF DGMPLGISGTFNFMIVFQ EHNILMHPFHML
Subjt:  SVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMCPWIAVAYSAPVAAATTVFLIYPIGKGSFYDGMPLGISGTFNFMIVFQTEHNILMHPFHML

Query:  AVAGVFGSSLFSAMHGSLVTSSLIRETTENESANEGYIFGQEEETYNIVAAHGYFGRFIFQYASFNNSRSLHFFLAAWPVVGIWFTAL
         VAGVFG SLFSAMHGSLVTSSLIRETTENESANEGY FGQEEETYNIVAAHGYFGR IFQYASFNNSRSLHFFLAAWPVVGIWFTAL
Subjt:  AVAGVFGSSLFSAMHGSLVTSSLIRETTENESANEGYIFGQEEETYNIVAAHGYFGRFIFQYASFNNSRSLHFFLAAWPVVGIWFTAL

ATCG00270.1 photosystem II reaction center protein D

2.1e-31

29.14

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Query:  RESESLWGRFCNWITSTKNRLYIGWFGVLMIPTLLTATSVFI--ITFIAAPPIDIDGISEPVSGSLFYGNNIISGAIIPTSAAIGLHFYSIW---EAASV
        ++ + L+    +W+   +  +++GW G+L+ P    A   +    TF+ +        +  ++ S   G N ++ A+   + ++      +W        
Subjt:  RESESLWGRFCNWITSTKNRLYIGWFGVLMIPTLLTATSVFI--ITFIAAPPIDIDGISEPVSGSLFYGNNIISGAIIPTSAAIGLHFYSIW---EAASV

Query:  DEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMCPWIAVAYSAPVAAATTVFLIYPIGKGSFYDGMPLGISGTFNFMIVFQTEHNILMHPFHMLAV
          W   GG +  + LH    +  +M R++EL+  + + P+ A+A+S P+A   +VFLIYP+G+  ++     G++  F F++ FQ  HN  ++PFHM+ V
Subjt:  DEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMCPWIAVAYSAPVAAATTVFLIYPIGKGSFYDGMPLGISGTFNFMIVFQTEHNILMHPFHMLAV

Query:  AGVFGSSLFSAMHGSLVTSSLIRETTENESANEGYIFG--QEEETYNIVAAHGYFGRFIFQYASFNNSRSLHFFLAAWPVVGIWFTALVEVEACVKARSV
        AGV G++L  A+HG+ V ++L     + + AN    F   Q EETY++V A+ ++ + IF  A F+N R LHFF+   PV G+W +AL  V   +  R+ 
Subjt:  AGVFGSSLFSAMHGSLVTSSLIRETTENESANEGYIFG--QEEETYNIVAAHGYFGRFIFQYASFNNSRSLHFFLAAWPVVGIWFTALVEVEACVKARSV

Query:  AF
         F
Subjt:  AF

Sequences

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CDS sequence

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ATGACTGCAATTTTAGAGAGACGCGAAAGCGAAAGCCTATGGGGTCGTTTCTGTAACTGGATAACCAGCACTAAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTAAT
GATCCCTACCTTATTGACTGCAACTTCTGTATTTATTATTACCTTCATTGCTGCTCCTCCAATAGATATTGATGGTATTAGTGAACCTGTTTCTGGATCTCTATTTTACG
GAAACAATATTATTTCTGGTGCCATTATCCCTACTTCTGCAGCTATCGGGTTGCACTTTTACTCGATATGGGAAGCTGCTTCCGTTGATGAATGGTTATACAATGGTGGT
CCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGTAGCATGTTACATGGGTAGAGAGTGGGAACTTAGTTTCCGTCTGGGTATGTGTCCTTGGATTGCTGTTGCATA
TTCAGCTCCTGTTGCAGCTGCTACTACTGTTTTCTTAATATACCCAATTGGTAAAGGAAGCTTTTATGACGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGA
TTGTATTCCAGACTGAGCACAACATCCTTATGCACCCATTTCACATGTTAGCTGTAGCTGGTGTATTCGGCAGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACT
TCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACATATTCGGGCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTTGGCCG
ATTTATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTTGCTGCTTGGCCTGTAGTAGGTATCTGGTTCACCGCTTTAGTCGAGGTCGAAGCCT
GTGTTAAAGCCAGGTCCGTTGCATTTTATCATTTAGTTAAATGGAACCCAATCCAAGTCGAGGTTCAAACCTGTGTTAAAGCTAGATCCGTTGCATCTTATCTTTCGGTT
AAATCGAACCCGATCCAAGTCGATGTCGAAGCTTGTGTTAAAGCTAGGTCCGTTGCATTTTATCTTTCGGTTAAATCGAACTCGATCCAAGTCAAGGTTGAAGCCTGTGT
TAAAGCCAAGTCCATTGCATTTTATCATTTGGTTAAATCGAACCCGATCCAAGTCGAGGTCGAAGCCTGTGTTAAAGCCAGGTCTGTTGCATCTTATCATTTTGTAAAAT
CGAACCCAATCCAAGTCGAGGTCGAAGCCTATGTTAAAGCCAGGTCCGTTGCATTTTATCTTTAG

mRNA sequence

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Protein sequence

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MTAILERRESESLWGRFCNWITSTKNRLYIGWFGVLMIPTLLTATSVFIITFIAAPPIDIDGISEPVSGSLFYGNNIISGAIIPTSAAIGLHFYSIWEAASVDEWLYNGG
PYELIVLHFLLGVACYMGREWELSFRLGMCPWIAVAYSAPVAAATTVFLIYPIGKGSFYDGMPLGISGTFNFMIVFQTEHNILMHPFHMLAVAGVFGSSLFSAMHGSLVT
SSLIRETTENESANEGYIFGQEEETYNIVAAHGYFGRFIFQYASFNNSRSLHFFLAAWPVVGIWFTALVEVEACVKARSVAFYHLVKWNPIQVEVQTCVKARSVASYLSV
KSNPIQVDVEACVKARSVAFYLSVKSNSIQVKVEACVKAKSIAFYHLVKSNPIQVEVEACVKARSVASYHFVKSNPIQVEVEAYVKARSVAFYL

Moc02g25630 (gene) of Bitter gourd (OHB3-1) v2 genome