CuGenDBv2

Gene ID	Moc02g25730
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Photosystem II protein D1
Genome location	chr2:18358515..18360370
RNA-Seq Expression	Moc02g25730
Synteny	Moc02g25730
Gene Ontology terms	GO:0009635 - response to herbicide (biological process) GO:0009772 - photosynthetic electron transport in photosystem II (biological process) GO:0018298 - protein-chromophore linkage (biological process) GO:0009523 - photosystem II (cellular component) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0005506 - iron ion binding (molecular function) GO:0010242 - oxygen evolving activity (molecular function) GO:0016168 - chlorophyll binding (molecular function) GO:0016682 - oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor (molecular function) GO:0045156 - electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity (molecular function)
InterPro domains	IPR000484 - Photosynthetic reaction centre, L/M IPR005867 - Photosystem II protein D1 IPR036854 - Photosystem II protein D1/D2 superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG5070533.1 hypothetical protein JHK85_002910 [Glycine max]

9.9e-179

73.91

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Query:  MTAILERRESESLWGRFCNWITSTENYLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVGIDGISEPVYGSLFYGNNIISGAIIPTSAAIGLHFYPIWEAA
        MTAILERRESESLWGRFCNWITSTEN LYIGWFGVLMIPTLLTATSVFIIAFIAAPPV IDGI EPV GSL YGNNIISGAIIPTSAAIGLHFYPIWEAA
Subjt:  MTAILERRESESLWGRFCNWITSTENYLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVGIDGISEPVYGSLFYGNNIISGAIIPTSAAIGLHFYPIWEAA

Query:  FVDEWLYNGGPYELIVLHILLGVACYMGREWELSFRLGMCPWIAVAYSAPVAAATAVFLIYPIGKGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHML
         VDEWLYNGGPYELIVLH LLGVACYMGREWELSFRLGM PWIAVAYSAPVAAATAVFLIYPIG+GSFSDGMPLGIS                       
Subjt:  FVDEWLYNGGPYELIVLHILLGVACYMGREWELSFRLGMCPWIAVAYSAPVAAATAVFLIYPIGKGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHML

Query:  GVAGVFGSSLFSAMHGSLVTSSLIKETIENESANEVYRFGQEEETYNIVAAYGYFGRLIFQYASFNNSRSLHFLIAAWPVVGIWFTALGC----------
        GVAGVFG SLFSAMHGSLVTSSLI+ET ENESANE YRFGQEEETYNIVAA+GYFGRLIFQYASFNNSRSLHF +AAWPVVGIWFTALG           
Subjt:  GVAGVFGSSLFSAMHGSLVTSSLIKETIENESANEVYRFGQEEETYNIVAAYGYFGRLIFQYASFNNSRSLHFLIAAWPVVGIWFTALGC----------

Query:  -------------------------------------------------------------ITTPLTRGRLPSQHLDSALPKLFWFTQAFRTCPTVAEQF
                                                                     ITTPLT GRLPSQHLD ALPK FWFT  F TCPTVAEQF
Subjt:  -------------------------------------------------------------ITTPLTRGRLPSQHLDSALPKLFWFTQAFRTCPTVAEQF

Query:  LDIKRTSPEGNFNVADFPSFAISFAIAPAALANCPPFPSVISMLCMVVPKGISVEVDSSF
        LDIKRTSPEGNFNVADFPSFAISFA APAALANCPPFPSVISMLC+ VPKGISVEVDSSF
Subjt:  LDIKRTSPEGNFNVADFPSFAISFAIAPAALANCPPFPSVISMLCMVVPKGISVEVDSSF

RZC67096.1 hypothetical protein C5167_010806 [Papaver somniferum]

5.6e-166

75.54

Show/hide

Query:  MTAILERRESESLWGRFCNWITSTENYLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVGIDGISEPVYGSLFYGNNIISGAIIPTSAAIGLHFYPIWEAA
        MTAILERRESESLWGRFCNWITSTEN LYIGWFGVLMIPTLLTATSVFIIAFIAAPPV IDGI EPV GSL YGNNIISGAIIPTSAAIGLHFYPIWEAA
Subjt:  MTAILERRESESLWGRFCNWITSTENYLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVGIDGISEPVYGSLFYGNNIISGAIIPTSAAIGLHFYPIWEAA

Query:  FVDEWLYNGGPYELIVLHILLGVACYMGREWELSFRLGMCPWIAVAYSAPVAAATAVFLIYPIGKGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHML
         VDEWLYNGGPYELIVLH LLGVACYMGREWE SFRLGM P IAVAYS P AAATAVFLIYPIG+GSFSDGMPLGISGTF FMIVFQAEHNILMHPFHML
Subjt:  FVDEWLYNGGPYELIVLHILLGVACYMGREWELSFRLGMCPWIAVAYSAPVAAATAVFLIYPIGKGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHML

Query:  GVAGVFGSSLFSAMHGSLVTSSLIKETIENESANEVYRFGQEEETYNIVAAYGYFGRLIFQYASFNNSRSLHFLIAAWPVVGIWFTALGC----------
        GV G                     ET ENESANE YRFGQEEETYNIVAA+ YFGRLIFQYASFNNSRSLHF +AAWPVVGIWFTALG           
Subjt:  GVAGVFGSSLFSAMHGSLVTSSLIKETIENESANEVYRFGQEEETYNIVAAYGYFGRLIFQYASFNNSRSLHFLIAAWPVVGIWFTALGC----------

Query:  ----------------------------ITTPLTRGRLPSQHLDSALPKLFWFTQAFRTCPTVAEQFLDIKRTSPEGNFNVADFPSFAISFAIAPAALAN
                                    ITTPLT GRLP Q LD +LPK+FWFT    T PTV EQFLDI+RTSP G FNVAD PSFAISFA   AALAN
Subjt:  ----------------------------ITTPLTRGRLPSQHLDSALPKLFWFTQAFRTCPTVAEQFLDIKRTSPEGNFNVADFPSFAISFAIAPAALAN

Query:  CPPFPSVISMLCM
        CPPFPSVI MLCM
Subjt:  CPPFPSVISMLCM

THU42148.1 hypothetical protein C4D60_Mb00t14710 [Musa balbisiana]

9.2e-193

79.55

Show/hide

Query:  MTAILERRESESLWGRFCNWITSTENYLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVGIDGISEPVYGSLFYGNNIISGAIIPTSAAIGLHFYPIWEAA
        MTAILERRES SLWGRFCNWITSTEN LYIGWFGVLMIPTLLTATSVFIIAFIAAPPV IDGI EPV GSL YGNNIISGAIIPTSAAIGLHFYPIWEAA
Subjt:  MTAILERRESESLWGRFCNWITSTENYLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVGIDGISEPVYGSLFYGNNIISGAIIPTSAAIGLHFYPIWEAA

Query:  FVDEWLYNGGPYELIVLHILLGVACYMGREWELSFRLGMCPWIAVAYSAPVAAATAVFLIYPIGKGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHML
         VDEWLYNGGPYELIVLH LLGVACYMGREWELSFRLGM PWIAVAYSAPVAAATAVFLIYPIG+GSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHML
Subjt:  FVDEWLYNGGPYELIVLHILLGVACYMGREWELSFRLGMCPWIAVAYSAPVAAATAVFLIYPIGKGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHML

Query:  GVAGVFGSSLFSAMHGSLVTSSLIKETIENESANEVYRFGQEEETYNIVAAYGYFGRLIFQYASFNNSRSLHFLIAAWPVVGIWFTALGC----------
        GVAGVFG SLFSAMHGSLVTSSLI+ET ENESAN  YRFGQEEETYNIVAA+GYFGRLIFQYASFNNSRSLHF +AAWPV+GIWFTALG           
Subjt:  GVAGVFGSSLFSAMHGSLVTSSLIKETIENESANEVYRFGQEEETYNIVAAYGYFGRLIFQYASFNNSRSLHFLIAAWPVVGIWFTALGC----------

Query:  --------------ITTPLTR--------------------------------GRLPSQHLDSALPKLFWFTQAFRTCPTVAEQFLDIKRTSPEGNFNVA
                      I  P++R                                GRLPSQHLD ALPKLFWFT    TCPTVA+QFLDIKRTSP+GN NVA
Subjt:  --------------ITTPLTR--------------------------------GRLPSQHLDSALPKLFWFTQAFRTCPTVAEQFLDIKRTSPEGNFNVA

Query:  DFPSFAISFAIAPAALANCPPFPSVISMLCMVVPKGISVEVDSSF
        D PSFAISFA APAALANCPPFPSVISMLCM VPKGISVEVDSSF
Subjt:  DFPSFAISFAIAPAALANCPPFPSVISMLCMVVPKGISVEVDSSF

THU43139.1 hypothetical protein C4D60_Mb00t04800 [Musa balbisiana]

7.3e-190

84.22

Show/hide

Query:  MTAILERRESESLWGRFCNWITSTENYLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVGIDGISEPVYGSLFYGNNIISGAIIPTSAAIGLHFYPIWEAA
        MTAILERRES SLWGRFCNWITSTEN LYIGWFGVLMIPTLLTATSVFIIAFIAAPPV IDGI EPV GSL YGNNIISGAIIPTSAAIGLHFYPIWEAA
Subjt:  MTAILERRESESLWGRFCNWITSTENYLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVGIDGISEPVYGSLFYGNNIISGAIIPTSAAIGLHFYPIWEAA

Query:  FVDEWLYNGGPYELIVLHILLGVACYMGREWELSFRLGMCPWIAVAYSAPVAAATAVFLIYPIGKGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHML
         VDEWLYNGGPYELIVLH LLGVACYMGREWELSFRLGM PWIAVAYSAPVAAATAVFLIYPIG+GSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHML
Subjt:  FVDEWLYNGGPYELIVLHILLGVACYMGREWELSFRLGMCPWIAVAYSAPVAAATAVFLIYPIGKGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHML

Query:  GVAGVFGSSLFSAMHGSLVTSSLIKETIENESANEVYRFGQEEETYNIVAAYGYFGRLIFQYASFNNSRSLHFLIAAWPV-----------------VGI
        GVAGVFG SLFSAMHGSLVTSSLI+ET ENESAN  YRFGQEEETYNIVAA+GYFGRLIFQYASFNNSRSLHF +AAWP+                  G+
Subjt:  GVAGVFGSSLFSAMHGSLVTSSLIKETIENESANEVYRFGQEEETYNIVAAYGYFGRLIFQYASFNNSRSLHFLIAAWPV-----------------VGI

Query:  W--FTALGCIT----TPLTRGRLPSQHLDSALPKLFWFTQAFRTCPTVAEQFLDIKRTSPEGNFNVADFPSFAISFAIAPAALANCPPFPSVISMLCMVV
        W  F  LG           +GRLPSQHLD ALPKLFWFT    TCPTVA+QFLDIKRTSP+GN NVAD PSFAISFA APAALANCPPFPSVISMLCM V
Subjt:  W--FTALGCIT----TPLTRGRLPSQHLDSALPKLFWFTQAFRTCPTVAEQFLDIKRTSPEGNFNVADFPSFAISFAIAPAALANCPPFPSVISMLCMVV

Query:  PKGISVEVDSSF
        PKGISVEVDSSF
Subjt:  PKGISVEVDSSF

TXG48644.1 hypothetical protein EZV62_024519 [Acer yangbiense]

1.6e-168

82.35

Show/hide

Query:  MTAILERRESESLWGRFCNWITSTENYLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVGIDGISEPVYGSLFYGNNIISGAIIPTSAAIGLHFYPIWEAA
        MTAILERRESE LWGRFCNWITSTEN LYIGWFGVLMIPTLLTATSVFIIAFIAAPPV IDGI EPV GSL YGNNIISGAIIPTSAAIGLHFYPIWEAA
Subjt:  MTAILERRESESLWGRFCNWITSTENYLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVGIDGISEPVYGSLFYGNNIISGAIIPTSAAIGLHFYPIWEAA

Query:  FVDEWLYNGGPYELIVLHILLGVACYMGREWELSFRLGMCPWIAVAYSAPVAAATAVFLIYPIGKGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHML
         VDEWLYNGGPYELIVLH LLGVACYMGREWELSFRLGM PWIAVAYSAPVAAATAVFLIYPIG+GSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHML
Subjt:  FVDEWLYNGGPYELIVLHILLGVACYMGREWELSFRLGMCPWIAVAYSAPVAAATAVFLIYPIGKGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHML

Query:  GVAGVFGSSLFSAMHGSLVTSSLIKETIENESANEVYRFGQEEETYNIVAAYGYFGRLIFQYASFNNSRSLHFLIAAWPVVGIWFTALGCITTP------
        GVAGVFG SLFSAMHGSLVTSSLI+ET ENESANE YRFGQEEETYNIVAA+GYFGRLIFQYASFNNSRSLHF +AAWPVVGIWFTALG  T        
Subjt:  GVAGVFGSSLFSAMHGSLVTSSLIKETIENESANEVYRFGQEEETYNIVAAYGYFGRLIFQYASFNNSRSLHFLIAAWPVVGIWFTALGCITTP------

Query:  ------------------------------LTRGRLPSQHLDSALPKLFWFTQAFRTCPTVAEQFLDIKRTSPE
                                      +   RLPSQH D ALPKLFWFT  F TCPTVAEQFLDIKRTSPE
Subjt:  ------------------------------LTRGRLPSQHLDSALPKLFWFTQAFRTCPTVAEQFLDIKRTSPE

TrEMBL top hits

e value

%identity

Alignment

A0A2N9HLK7 Photosystem II protein D1

5.1e-189

78.22

Show/hide

Query:  MTAILERRESESLWGRFCNWITSTENYLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVGIDGISEPVYGSLFYGNNIISGAIIPTSAAIGLHFYPIWEAA
        MTAILERRESESLWGRFCNWITSTEN LYIGWFGVLMIPTLLTATSVFIIAFIAAPPV IDGI EPV GSL YGNNIISGAIIPTSAAIGLHFYPIWEAA
Subjt:  MTAILERRESESLWGRFCNWITSTENYLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVGIDGISEPVYGSLFYGNNIISGAIIPTSAAIGLHFYPIWEAA

Query:  FVDEWLYNGGPYELIVLHILLGVACYMGREWELSFRLGMCPWIAVAYSAPVAAATAVFLIYPIGKGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHML
         VDEWLYNGGPYELIVLH LLGVACYMGREWELSFRLGM PWIAVAYSAPVAAATAVFLIYPIG+GSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHML
Subjt:  FVDEWLYNGGPYELIVLHILLGVACYMGREWELSFRLGMCPWIAVAYSAPVAAATAVFLIYPIGKGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHML

Query:  GVAGVFGSSLFSAMHGSLVTSSLIKETIENESANEVYRFGQEEETYNIVAAYGYFGRLIFQYASFNNSRSLHFLIAAWPVVGIWFTALGCIT--------
        GVAGVFG SLFSAMHGSLVTSSLI+ET ENESANE YRFGQEEETYNIVAA+GYFGRLIFQYASFNNSRSLHF +AAWPVVGIWFTALG  T        
Subjt:  GVAGVFGSSLFSAMHGSLVTSSLIKETIENESANEVYRFGQEEETYNIVAAYGYFGRLIFQYASFNNSRSLHFLIAAWPVVGIWFTALGCIT--------

Query:  ------------------------------------------------TPLTRG-----------RLPSQHLDSALPKLFWFTQAFRTCPTVAEQFLDIK
                                                         P T G           RLPSQHLD ALPKLFWFT    TCPTVAEQFLDIK
Subjt:  ------------------------------------------------TPLTRG-----------RLPSQHLDSALPKLFWFTQAFRTCPTVAEQFLDIK

Query:  RTSP--EGNFNVADFPSFAISFAIAPAALANCPPFPSVISMLCMVVPKGI
        RTSP  EGNFNVADFPSFAISFA APAALANCPPFPSVISMLCM VPKG+
Subjt:  RTSP--EGNFNVADFPSFAISFAIAPAALANCPPFPSVISMLCMVVPKGI

A0A4S8I4I1 Photosystem II protein D1

4.4e-193

79.55

Show/hide

Query:  MTAILERRESESLWGRFCNWITSTENYLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVGIDGISEPVYGSLFYGNNIISGAIIPTSAAIGLHFYPIWEAA
        MTAILERRES SLWGRFCNWITSTEN LYIGWFGVLMIPTLLTATSVFIIAFIAAPPV IDGI EPV GSL YGNNIISGAIIPTSAAIGLHFYPIWEAA
Subjt:  MTAILERRESESLWGRFCNWITSTENYLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVGIDGISEPVYGSLFYGNNIISGAIIPTSAAIGLHFYPIWEAA

Query:  FVDEWLYNGGPYELIVLHILLGVACYMGREWELSFRLGMCPWIAVAYSAPVAAATAVFLIYPIGKGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHML
         VDEWLYNGGPYELIVLH LLGVACYMGREWELSFRLGM PWIAVAYSAPVAAATAVFLIYPIG+GSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHML
Subjt:  FVDEWLYNGGPYELIVLHILLGVACYMGREWELSFRLGMCPWIAVAYSAPVAAATAVFLIYPIGKGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHML

Query:  GVAGVFGSSLFSAMHGSLVTSSLIKETIENESANEVYRFGQEEETYNIVAAYGYFGRLIFQYASFNNSRSLHFLIAAWPVVGIWFTALGC----------
        GVAGVFG SLFSAMHGSLVTSSLI+ET ENESAN  YRFGQEEETYNIVAA+GYFGRLIFQYASFNNSRSLHF +AAWPV+GIWFTALG           
Subjt:  GVAGVFGSSLFSAMHGSLVTSSLIKETIENESANEVYRFGQEEETYNIVAAYGYFGRLIFQYASFNNSRSLHFLIAAWPVVGIWFTALGC----------

Query:  --------------ITTPLTR--------------------------------GRLPSQHLDSALPKLFWFTQAFRTCPTVAEQFLDIKRTSPEGNFNVA
                      I  P++R                                GRLPSQHLD ALPKLFWFT    TCPTVA+QFLDIKRTSP+GN NVA
Subjt:  --------------ITTPLTR--------------------------------GRLPSQHLDSALPKLFWFTQAFRTCPTVAEQFLDIKRTSPEGNFNVA

Query:  DFPSFAISFAIAPAALANCPPFPSVISMLCMVVPKGISVEVDSSF
        D PSFAISFA APAALANCPPFPSVISMLCM VPKGISVEVDSSF
Subjt:  DFPSFAISFAIAPAALANCPPFPSVISMLCMVVPKGISVEVDSSF

A0A4S8I6F7 Photosystem II protein D1

3.5e-190

84.22

Show/hide

Query:  MTAILERRESESLWGRFCNWITSTENYLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVGIDGISEPVYGSLFYGNNIISGAIIPTSAAIGLHFYPIWEAA
        MTAILERRES SLWGRFCNWITSTEN LYIGWFGVLMIPTLLTATSVFIIAFIAAPPV IDGI EPV GSL YGNNIISGAIIPTSAAIGLHFYPIWEAA
Subjt:  MTAILERRESESLWGRFCNWITSTENYLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVGIDGISEPVYGSLFYGNNIISGAIIPTSAAIGLHFYPIWEAA

Query:  FVDEWLYNGGPYELIVLHILLGVACYMGREWELSFRLGMCPWIAVAYSAPVAAATAVFLIYPIGKGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHML
         VDEWLYNGGPYELIVLH LLGVACYMGREWELSFRLGM PWIAVAYSAPVAAATAVFLIYPIG+GSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHML
Subjt:  FVDEWLYNGGPYELIVLHILLGVACYMGREWELSFRLGMCPWIAVAYSAPVAAATAVFLIYPIGKGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHML

Query:  GVAGVFGSSLFSAMHGSLVTSSLIKETIENESANEVYRFGQEEETYNIVAAYGYFGRLIFQYASFNNSRSLHFLIAAWPV-----------------VGI
        GVAGVFG SLFSAMHGSLVTSSLI+ET ENESAN  YRFGQEEETYNIVAA+GYFGRLIFQYASFNNSRSLHF +AAWP+                  G+
Subjt:  GVAGVFGSSLFSAMHGSLVTSSLIKETIENESANEVYRFGQEEETYNIVAAYGYFGRLIFQYASFNNSRSLHFLIAAWPV-----------------VGI

Query:  W--FTALGCIT----TPLTRGRLPSQHLDSALPKLFWFTQAFRTCPTVAEQFLDIKRTSPEGNFNVADFPSFAISFAIAPAALANCPPFPSVISMLCMVV
        W  F  LG           +GRLPSQHLD ALPKLFWFT    TCPTVA+QFLDIKRTSP+GN NVAD PSFAISFA APAALANCPPFPSVISMLCM V
Subjt:  W--FTALGCIT----TPLTRGRLPSQHLDSALPKLFWFTQAFRTCPTVAEQFLDIKRTSPEGNFNVADFPSFAISFAIAPAALANCPPFPSVISMLCMVV

Query:  PKGISVEVDSSF
        PKGISVEVDSSF
Subjt:  PKGISVEVDSSF

A0A5C7GV23 Photosystem II protein D1

7.6e-169

82.35

Show/hide

Query:  MTAILERRESESLWGRFCNWITSTENYLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVGIDGISEPVYGSLFYGNNIISGAIIPTSAAIGLHFYPIWEAA
        MTAILERRESE LWGRFCNWITSTEN LYIGWFGVLMIPTLLTATSVFIIAFIAAPPV IDGI EPV GSL YGNNIISGAIIPTSAAIGLHFYPIWEAA
Subjt:  MTAILERRESESLWGRFCNWITSTENYLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVGIDGISEPVYGSLFYGNNIISGAIIPTSAAIGLHFYPIWEAA

Query:  FVDEWLYNGGPYELIVLHILLGVACYMGREWELSFRLGMCPWIAVAYSAPVAAATAVFLIYPIGKGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHML
         VDEWLYNGGPYELIVLH LLGVACYMGREWELSFRLGM PWIAVAYSAPVAAATAVFLIYPIG+GSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHML
Subjt:  FVDEWLYNGGPYELIVLHILLGVACYMGREWELSFRLGMCPWIAVAYSAPVAAATAVFLIYPIGKGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHML

Query:  GVAGVFGSSLFSAMHGSLVTSSLIKETIENESANEVYRFGQEEETYNIVAAYGYFGRLIFQYASFNNSRSLHFLIAAWPVVGIWFTALGCITTP------
        GVAGVFG SLFSAMHGSLVTSSLI+ET ENESANE YRFGQEEETYNIVAA+GYFGRLIFQYASFNNSRSLHF +AAWPVVGIWFTALG  T        
Subjt:  GVAGVFGSSLFSAMHGSLVTSSLIKETIENESANEVYRFGQEEETYNIVAAYGYFGRLIFQYASFNNSRSLHFLIAAWPVVGIWFTALGCITTP------

Query:  ------------------------------LTRGRLPSQHLDSALPKLFWFTQAFRTCPTVAEQFLDIKRTSPE
                                      +   RLPSQH D ALPKLFWFT  F TCPTVAEQFLDIKRTSPE
Subjt:  ------------------------------LTRGRLPSQHLDSALPKLFWFTQAFRTCPTVAEQFLDIKRTSPE

M0ZYJ3 32 kDa thylakoid membrane protein

1.5e-193

83.89

Show/hide

Query:  MTAILERRESESLWGRFCNWITSTENYLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVGIDGISEPVYGSLFYGNNIISGAIIPTSAAIGLHFYPIWEAA
        MTAILERRESESLWGRFCNWITSTEN LYIGWFGVLMIPTLLTATSVFIIAFIAAPPV IDGI EPV GSL YGNNIISGAIIPTSAAIGLHFYPIWEAA
Subjt:  MTAILERRESESLWGRFCNWITSTENYLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVGIDGISEPVYGSLFYGNNIISGAIIPTSAAIGLHFYPIWEAA

Query:  FVDEWLYNGGPYELIVLHILLGVACYMGREWELSFRLGMCPWIAVAYSAPVAAATAVFLIYPIGKGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHML
         VDEWLYNGGPYELIVLH LLGVACYMGREWELSFRLGM PWIAVAYSAPVAAATAVFLIYPIG+GSFSDG     SGTFNFMIVFQAEHNILMHPFHML
Subjt:  FVDEWLYNGGPYELIVLHILLGVACYMGREWELSFRLGMCPWIAVAYSAPVAAATAVFLIYPIGKGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHML

Query:  GVAGVFGSSLFSAMHGSLVTSSLIKETIENESANEVYRFGQEEETYNIVAAYGYFGRLIFQYASFNNSRSLHFLIAAWPVVGIWFTALGC----------
        GVAGVFG SLFSAMHGSLVTSSLI+ET ENESANE YRFGQEEETYNIVAA+GYFGRLIFQYASFNNSRSLHF +AAWPVVGIWFTALG           
Subjt:  GVAGVFGSSLFSAMHGSLVTSSLIKETIENESANEVYRFGQEEETYNIVAAYGYFGRLIFQYASFNNSRSLHFLIAAWPVVGIWFTALGC----------

Query:  ----------------------------ITTPLTRGRLPSQHLDSALPKLFWFTQAFRTCPTVAEQFLDIKRTSPEGNFNVADFPSFAISFAIAPAALAN
                                    ITTPLT GRLPSQ LD ALPKLFWFT  F TCPTVAEQFLDIKRTSPEGNFNVADFPSFAISFA APAALAN
Subjt:  ----------------------------ITTPLTRGRLPSQHLDSALPKLFWFTQAFRTCPTVAEQFLDIKRTSPEGNFNVADFPSFAISFAIAPAALAN

Query:  CPPFPSVISMLCMVVPKGISVE
        CPPFPSVISMLCM VPKGISVE
Subjt:  CPPFPSVISMLCMVVPKGISVE

SwissProt top hits

e value

%identity

Alignment

A4QJI0 Photosystem II protein D1

2.1e-155

93.84

Show/hide

Query:  MTAILERRESESLWGRFCNWITSTENYLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVGIDGISEPVYGSLFYGNNIISGAIIPTSAAIGLHFYPIWEAA
        MTAILERRESESLWGRFCNWITSTEN LYIGWFGVLMIPTLLTATSVFIIAFIAAPPV IDGI EPV GSL YGNNIISGAIIPTSAAIGLHFYPIWEAA
Subjt:  MTAILERRESESLWGRFCNWITSTENYLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVGIDGISEPVYGSLFYGNNIISGAIIPTSAAIGLHFYPIWEAA

Query:  FVDEWLYNGGPYELIVLHILLGVACYMGREWELSFRLGMCPWIAVAYSAPVAAATAVFLIYPIGKGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHML
         VDEWLYNGGPYELIVLH LLGVACYMGREWELSFRLGM PWIAVAYSAPVAAATAVFLIYPIG+GSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHML
Subjt:  FVDEWLYNGGPYELIVLHILLGVACYMGREWELSFRLGMCPWIAVAYSAPVAAATAVFLIYPIGKGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHML

Query:  GVAGVFGSSLFSAMHGSLVTSSLIKETIENESANEVYRFGQEEETYNIVAAYGYFGRLIFQYASFNNSRSLHFLIAAWPVVGIWFTALGCIT
        GVAGVFG SLFSAMHGSLVTSSLI+ET ENESANE YRFGQEEETYNIVAA+GYFGRLIFQYASFNNSRSLHF +AAWPVVGIWFTALG  T
Subjt:  GVAGVFGSSLFSAMHGSLVTSSLIKETIENESANEVYRFGQEEETYNIVAAYGYFGRLIFQYASFNNSRSLHFLIAAWPVVGIWFTALGCIT

A4QJZ9 Photosystem II protein D1

2.1e-155

93.84

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Query:  MTAILERRESESLWGRFCNWITSTENYLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVGIDGISEPVYGSLFYGNNIISGAIIPTSAAIGLHFYPIWEAA
        MTAILERRESESLWGRFCNWITSTEN LYIGWFGVLMIPTLLTATSVFIIAFIAAPPV IDGI EPV GSL YGNNIISGAIIPTSAAIGLHFYPIWEAA
Subjt:  MTAILERRESESLWGRFCNWITSTENYLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVGIDGISEPVYGSLFYGNNIISGAIIPTSAAIGLHFYPIWEAA

Query:  FVDEWLYNGGPYELIVLHILLGVACYMGREWELSFRLGMCPWIAVAYSAPVAAATAVFLIYPIGKGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHML
         VDEWLYNGGPYELIVLH LLGVACYMGREWELSFRLGM PWIAVAYSAPVAAATAVFLIYPIG+GSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHML
Subjt:  FVDEWLYNGGPYELIVLHILLGVACYMGREWELSFRLGMCPWIAVAYSAPVAAATAVFLIYPIGKGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHML

Query:  GVAGVFGSSLFSAMHGSLVTSSLIKETIENESANEVYRFGQEEETYNIVAAYGYFGRLIFQYASFNNSRSLHFLIAAWPVVGIWFTALGCIT
        GVAGVFG SLFSAMHGSLVTSSLI+ET ENESANE YRFGQEEETYNIVAA+GYFGRLIFQYASFNNSRSLHF +AAWPVVGIWFTALG  T
Subjt:  GVAGVFGSSLFSAMHGSLVTSSLIKETIENESANEVYRFGQEEETYNIVAAYGYFGRLIFQYASFNNSRSLHFLIAAWPVVGIWFTALGCIT

P83755 Photosystem II protein D1

2.1e-155

93.84

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Query:  MTAILERRESESLWGRFCNWITSTENYLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVGIDGISEPVYGSLFYGNNIISGAIIPTSAAIGLHFYPIWEAA
        MTAILERRESESLWGRFCNWITSTEN LYIGWFGVLMIPTLLTATSVFIIAFIAAPPV IDGI EPV GSL YGNNIISGAIIPTSAAIGLHFYPIWEAA
Subjt:  MTAILERRESESLWGRFCNWITSTENYLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVGIDGISEPVYGSLFYGNNIISGAIIPTSAAIGLHFYPIWEAA

Query:  FVDEWLYNGGPYELIVLHILLGVACYMGREWELSFRLGMCPWIAVAYSAPVAAATAVFLIYPIGKGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHML
         VDEWLYNGGPYELIVLH LLGVACYMGREWELSFRLGM PWIAVAYSAPVAAATAVFLIYPIG+GSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHML
Subjt:  FVDEWLYNGGPYELIVLHILLGVACYMGREWELSFRLGMCPWIAVAYSAPVAAATAVFLIYPIGKGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHML

Query:  GVAGVFGSSLFSAMHGSLVTSSLIKETIENESANEVYRFGQEEETYNIVAAYGYFGRLIFQYASFNNSRSLHFLIAAWPVVGIWFTALGCIT
        GVAGVFG SLFSAMHGSLVTSSLI+ET ENESANE YRFGQEEETYNIVAA+GYFGRLIFQYASFNNSRSLHF +AAWPVVGIWFTALG  T
Subjt:  GVAGVFGSSLFSAMHGSLVTSSLIKETIENESANEVYRFGQEEETYNIVAAYGYFGRLIFQYASFNNSRSLHFLIAAWPVVGIWFTALGCIT

Q33282 Photosystem II protein D1

7.1e-156

94.18

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Query:  MTAILERRESESLWGRFCNWITSTENYLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVGIDGISEPVYGSLFYGNNIISGAIIPTSAAIGLHFYPIWEAA
        MTAILERRESESLWGRFCNWITSTEN LYIGWFGVLMIPTLLTATSVFIIAFIAAPPV IDGI EPV GSL YGNNIISGAIIPTSAAIGLHFYPIWEAA
Subjt:  MTAILERRESESLWGRFCNWITSTENYLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVGIDGISEPVYGSLFYGNNIISGAIIPTSAAIGLHFYPIWEAA

Query:  FVDEWLYNGGPYELIVLHILLGVACYMGREWELSFRLGMCPWIAVAYSAPVAAATAVFLIYPIGKGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHML
         VDEWLYNGGPYELIVLH LLGVACYMGREWELSFRLGM PWIAVAYSAPVAAATAVFLIYPIG+GSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHML
Subjt:  FVDEWLYNGGPYELIVLHILLGVACYMGREWELSFRLGMCPWIAVAYSAPVAAATAVFLIYPIGKGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHML

Query:  GVAGVFGSSLFSAMHGSLVTSSLIKETIENESANEVYRFGQEEETYNIVAAYGYFGRLIFQYASFNNSRSLHFLIAAWPVVGIWFTALGCIT
        GVAGVFGSSLFSAMHGSLVTSSLI+ET ENESANE YRFGQEEETYNIVAA+GYFGRLIFQYASFNNSRSLHF +AAWPVVGIWFTALG  T
Subjt:  GVAGVFGSSLFSAMHGSLVTSSLIKETIENESANEVYRFGQEEETYNIVAAYGYFGRLIFQYASFNNSRSLHFLIAAWPVVGIWFTALGCIT

Q7FNT3 Photosystem II protein D1

2.1e-155

93.84

Show/hide

Query:  MTAILERRESESLWGRFCNWITSTENYLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVGIDGISEPVYGSLFYGNNIISGAIIPTSAAIGLHFYPIWEAA
        MTAILERRESESLWGRFCNWITSTEN LYIGWFGVLMIPTLLTATSVFIIAFIAAPPV IDGI EPV GSL YGNNIISGAIIPTSAAIGLHFYPIWEAA
Subjt:  MTAILERRESESLWGRFCNWITSTENYLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVGIDGISEPVYGSLFYGNNIISGAIIPTSAAIGLHFYPIWEAA

Query:  FVDEWLYNGGPYELIVLHILLGVACYMGREWELSFRLGMCPWIAVAYSAPVAAATAVFLIYPIGKGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHML
         VDEWLYNGGPYELIVLH LLGVACYMGREWELSFRLGM PWIAVAYSAPVAAATAVFLIYPIG+GSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHML
Subjt:  FVDEWLYNGGPYELIVLHILLGVACYMGREWELSFRLGMCPWIAVAYSAPVAAATAVFLIYPIGKGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHML

Query:  GVAGVFGSSLFSAMHGSLVTSSLIKETIENESANEVYRFGQEEETYNIVAAYGYFGRLIFQYASFNNSRSLHFLIAAWPVVGIWFTALGCIT
        GVAGVFG SLFSAMHGSLVTSSLI+ET ENESANE YRFGQEEETYNIVAA+GYFGRLIFQYASFNNSRSLHF +AAWPVVGIWFTALG  T
Subjt:  GVAGVFGSSLFSAMHGSLVTSSLIKETIENESANEVYRFGQEEETYNIVAAYGYFGRLIFQYASFNNSRSLHFLIAAWPVVGIWFTALGCIT

Arabidopsis top hits

e value

%identity

Alignment

ATCG00020.1 photosystem II reaction center protein A

1.5e-156

93.84

Show/hide

Query:  MTAILERRESESLWGRFCNWITSTENYLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVGIDGISEPVYGSLFYGNNIISGAIIPTSAAIGLHFYPIWEAA
        MTAILERRESESLWGRFCNWITSTEN LYIGWFGVLMIPTLLTATSVFIIAFIAAPPV IDGI EPV GSL YGNNIISGAIIPTSAAIGLHFYPIWEAA
Subjt:  MTAILERRESESLWGRFCNWITSTENYLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVGIDGISEPVYGSLFYGNNIISGAIIPTSAAIGLHFYPIWEAA

Query:  FVDEWLYNGGPYELIVLHILLGVACYMGREWELSFRLGMCPWIAVAYSAPVAAATAVFLIYPIGKGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHML
         VDEWLYNGGPYELIVLH LLGVACYMGREWELSFRLGM PWIAVAYSAPVAAATAVFLIYPIG+GSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHML
Subjt:  FVDEWLYNGGPYELIVLHILLGVACYMGREWELSFRLGMCPWIAVAYSAPVAAATAVFLIYPIGKGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHML

Query:  GVAGVFGSSLFSAMHGSLVTSSLIKETIENESANEVYRFGQEEETYNIVAAYGYFGRLIFQYASFNNSRSLHFLIAAWPVVGIWFTALGCIT
        GVAGVFG SLFSAMHGSLVTSSLI+ET ENESANE YRFGQEEETYNIVAA+GYFGRLIFQYASFNNSRSLHF +AAWPVVGIWFTALG  T
Subjt:  GVAGVFGSSLFSAMHGSLVTSSLIKETIENESANEVYRFGQEEETYNIVAAYGYFGRLIFQYASFNNSRSLHFLIAAWPVVGIWFTALGCIT

ATCG00270.1 photosystem II reaction center protein D

1.9e-31

28.37

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Query:  RESESLWGRFCNWITSTENYLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVGIDGISEPVYGSLFYGNNIISGAIIPTSAAIGLHFYPIW---EAAFVDE
        ++ + L+    +W+   + ++++GW G+L+ P    A   +             G++     S   G N ++ A+   + ++      +W          
Subjt:  RESESLWGRFCNWITSTENYLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVGIDGISEPVYGSLFYGNNIISGAIIPTSAAIGLHFYPIW---EAAFVDE

Query:  WLYNGGPYELIVLHILLGVACYMGREWELSFRLGMCPWIAVAYSAPVAAATAVFLIYPIGKGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAG
        W   GG +  + LH    +  +M R++EL+  + + P+ A+A+S P+A   +VFLIYP+G+  +      G++  F F++ FQ  HN  ++PFHM+GVAG
Subjt:  WLYNGGPYELIVLHILLGVACYMGREWELSFRLGMCPWIAVAYSAPVAAATAVFLIYPIGKGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAG

Query:  VFGSSLFSAMHGSLVTSSLIKETIENESANEVYRFG--QEEETYNIVAAYGYFGRLIFQYASFNNSRSLHFLIAAWPVVGIWFTALGCI
        V G++L  A+HG+ V ++L +   + + AN    F   Q EETY++V A  ++ ++     +F+N R LHF +   PV G+W +ALG +
Subjt:  VFGSSLFSAMHGSLVTSSLIKETIENESANEVYRFG--QEEETYNIVAAYGYFGRLIFQYASFNNSRSLHFLIAAWPVVGIWFTALGCI

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGACTGCAATTTTAGAGAGACGCGAAAGTGAAAGCCTATGGGGTCGTTTCTGTAACTGGATAACCAGCACTGAAAACTATCTTTACATTGGATGGTTTGGTGTTTTGAT
GATCCCTACCTTATTGACTGCAACTTCTGTATTTATTATTGCCTTCATTGCTGCTCCTCCAGTAGGTATTGATGGTATTAGTGAACCTGTTTATGGATCTCTATTTTACG
GAAACAATATTATTTCTGGTGCCATTATCCCTACTTCTGCAGCTATCGGGTTGCACTTTTACCCGATATGGGAAGCTGCTTTCGTTGATGAATGGTTATACAATGGTGGT
CCTTATGAGCTAATTGTTCTACACATCTTACTTGGTGTAGCATGTTACATGGGTCGAGAGTGGGAACTTAGTTTCCGTCTGGGTATGTGTCCTTGGATTGCTGTTGCATA
TTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATCTACCCAATTGGTAAAGGAAGCTTTTCTGACGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGA
TTGTGTTCCAGGCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCAGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACT
TCTAGTTTGATCAAGGAAACCATAGAAAATGAATCTGCTAATGAAGTTTACAGATTCGGGCAAGAGGAAGAAACTTATAATATCGTAGCTGCTTATGGTTATTTTGGCCG
ATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTAATAGCTGCTTGGCCTGTAGTAGGTATCTGGTTCACCGCTTTAGGGTGCATAACTACTC
CTCTTACTAGAGGACGCTTACCTAGCCAACATTTAGATTCGGCTCTACCCAAACTTTTCTGGTTTACCCAAGCATTCCGCACTTGTCCGACTGTTGCTGAGCAATTTTTG
GATATCAAACGGACCTCTCCGGAAGGTAATTTTAATGTGGCCGATTTCCCCTCTTTTGCAATCAGTTTCGCTATAGCACCTGCTGCTCTAGCTAATTGTCCCCCCTTCCC
AAGTGTGATTTCTATGTTATGTATGGTTGTGCCTAAGGGCATATCGGTTGAAGTAGATTCTTCTTTTTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MTAILERRESESLWGRFCNWITSTENYLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVGIDGISEPVYGSLFYGNNIISGAIIPTSAAIGLHFYPIWEAAFVDEWLYNGG
PYELIVLHILLGVACYMGREWELSFRLGMCPWIAVAYSAPVAAATAVFLIYPIGKGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGSSLFSAMHGSLVT
SSLIKETIENESANEVYRFGQEEETYNIVAAYGYFGRLIFQYASFNNSRSLHFLIAAWPVVGIWFTALGCITTPLTRGRLPSQHLDSALPKLFWFTQAFRTCPTVAEQFL
DIKRTSPEGNFNVADFPSFAISFAIAPAALANCPPFPSVISMLCMVVPKGISVEVDSSF

Moc02g25730 (gene) of Bitter gourd (OHB3-1) v2 genome