; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc03g00100 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g00100
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionReverse transcriptase
Genome locationchr3:30834..32024
RNA-Seq ExpressionMoc03g00100
SyntenyMoc03g00100
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022143500.1 uncharacterized protein LOC111013378 [Momordica charantia]1.0e-3053.15Show/hide
Query:  MRVQDQEMKFSVYESLKYLVEAEECFVLRMLDEVERKNASSKFLLENQNLELETMLQRTEDFYYEVLSMDGGKETTNSWSRMHKDLKLEEVNQKQLKLSI
        MRVQDQE+KFS+Y+S+KY  +A E  VLR+LDE   K+ S++ +LE QN E++T+L++ ++   E+L  D   +   SWSR+H+ L LE++ +KQLK SI
Subjt:  MRVQDQEMKFSVYESLKYLVEAEECFVLRMLDEVERKNASSKFLLENQNLELETMLQRTEDFYYEVLSMDGGKETTNSWSRMHKDLKLEEVNQKQLKLSI

Query:  EEPPELELKALPQHLKYAYLGTANTLPIIIAANLPKNREEELL
        EE PEL LKA+P+H+KYAYLG +N LPIII A L   +E ELL
Subjt:  EEPPELELKALPQHLKYAYLGTANTLPIIIAANLPKNREEELL

XP_022150853.1 uncharacterized protein LOC111018898 [Momordica charantia]2.5e-1660.49Show/hide
Query:  KETTNSWSRMHKDLKLEEVNQKQLKLSIEEPPELELKALPQHLKYAYLGTANTLPIIIAANLPKNREEELLAVSESERLNI
        ++   SWSR+H+ L LE++ +KQLK SIEEPPELELK L +HLKYAYLG +NTLPIII A+L   +E ELLAV    R  I
Subjt:  KETTNSWSRMHKDLKLEEVNQKQLKLSIEEPPELELKALPQHLKYAYLGTANTLPIIIAANLPKNREEELLAVSESERLNI

XP_022157452.1 uncharacterized protein LOC111024147 [Momordica charantia]3.0e-3880.19Show/hide
Query:  LENQNLELETMLQRTEDFYYEVLSMDGGKETTNSWSRMHKDLKLEEVNQKQLKLSIEEPPELELKALPQHLKYAYLGTANTLPIIIAANLPKNREEELLA
        + N+NLELE MLQ+ EDFYYEV S+DGGKE TNSWSR H+DLKLEEVNQKQLK S+EEPP+LELKALPQHLKYAYLG ANTLPIIIAANL KN+EEELLA
Subjt:  LENQNLELETMLQRTEDFYYEVLSMDGGKETTNSWSRMHKDLKLEEVNQKQLKLSIEEPPELELKALPQHLKYAYLGTANTLPIIIAANLPKNREEELLA

Query:  VSESER
        V +  R
Subjt:  VSESER

XP_022158578.1 uncharacterized protein LOC111025032 [Momordica charantia]7.2e-2452.42Show/hide
Query:  AEECFVLRMLDEVERKNASSKFLLENQNLELETMLQRTEDFYYEVLSMDGGKETTNSWSRMHKDLKLEEVNQKQLKLSIEEPPELELKALPQHLKYAYLG
        A E  VLR+LDE   ++ S++ +LE  N E++ ML + ++   E+L +D   +   SWS +H+ L+LE++  KQLK S +EPPELELKALPQHLKYAYL 
Subjt:  AEECFVLRMLDEVERKNASSKFLLENQNLELETMLQRTEDFYYEVLSMDGGKETTNSWSRMHKDLKLEEVNQKQLKLSIEEPPELELKALPQHLKYAYLG

Query:  TANTLPIIIAANLPKNREEELLAV
         +N LPIIIAANL   +E ELLAV
Subjt:  TANTLPIIIAANLPKNREEELLAV

XP_024027316.1 uncharacterized protein LOC112093341 [Morus notabilis]1.8e-1439.6Show/hide
Query:  MRVQDQEMKFSVYESLKYLVEAEECFVLRMLDEVE----RKNASSKFLLENQNLELETMLQRTEDFYYEVLSMDGGKETTNSWSRMHKDLKLEEVNQKQL
        MRV DQ++ F+V++++++  E EEC  + +LD +      K  S K + E+   + E      ED     +S   G+ T+ S  R  + L+L E   KQ 
Subjt:  MRVQDQEMKFSVYESLKYLVEAEECFVLRMLDEVE----RKNASSKFLLENQNLELETMLQRTEDFYYEVLSMDGGKETTNSWSRMHKDLKLEEVNQKQL

Query:  KLSIEEPPELELKALPQHLKYAYLGTANTLPIIIAANLPKNREEELLAV
        K  +EEPP LEL+ LP HL+YAYLG +NTLP+IIA+ L    E +LL V
Subjt:  KLSIEEPPELELKALPQHLKYAYLGTANTLPIIIAANLPKNREEELLAV

TrEMBL top hitse value%identityAlignment
A0A2G9GZX9 Reverse transcriptase9.5e-1437.66Show/hide
Query:  MRVQDQEMKFSVYESLKYLVEAEECFVLRMLDEVERKNASSKFLLENQNLELETMLQRTEDFYYEVLSMDGGKETTNSWSRMHKDLKLEEVNQ----KQL
        MRVQDQ++ F+V++++K+  E+ ECFV+ + D++    + ++  L+     L  +L +  +   EV+      +T N+ S+  K   +E + +    K L
Subjt:  MRVQDQEMKFSVYESLKYLVEAEECFVLRMLDEVERKNASSKFLLENQNLELETMLQRTEDFYYEVLSMDGGKETTNSWSRMHKDLKLEEVNQ----KQL

Query:  KLSIEEPPELELKALPQHLKYAYLGTANTLPIIIAANLPKNREEELLAVSESER
        KLSIEEPP LELK LP HL YAYLG ++TLP+II ++L   + E+LL V  + +
Subjt:  KLSIEEPPELELKALPQHLKYAYLGTANTLPIIIAANLPKNREEELLAVSESER

A0A6J1CNZ2 uncharacterized protein LOC1110133785.0e-3153.15Show/hide
Query:  MRVQDQEMKFSVYESLKYLVEAEECFVLRMLDEVERKNASSKFLLENQNLELETMLQRTEDFYYEVLSMDGGKETTNSWSRMHKDLKLEEVNQKQLKLSI
        MRVQDQE+KFS+Y+S+KY  +A E  VLR+LDE   K+ S++ +LE QN E++T+L++ ++   E+L  D   +   SWSR+H+ L LE++ +KQLK SI
Subjt:  MRVQDQEMKFSVYESLKYLVEAEECFVLRMLDEVERKNASSKFLLENQNLELETMLQRTEDFYYEVLSMDGGKETTNSWSRMHKDLKLEEVNQKQLKLSI

Query:  EEPPELELKALPQHLKYAYLGTANTLPIIIAANLPKNREEELL
        EE PEL LKA+P+H+KYAYLG +N LPIII A L   +E ELL
Subjt:  EEPPELELKALPQHLKYAYLGTANTLPIIIAANLPKNREEELL

A0A6J1DAJ9 uncharacterized protein LOC1110188981.2e-1660.49Show/hide
Query:  KETTNSWSRMHKDLKLEEVNQKQLKLSIEEPPELELKALPQHLKYAYLGTANTLPIIIAANLPKNREEELLAVSESERLNI
        ++   SWSR+H+ L LE++ +KQLK SIEEPPELELK L +HLKYAYLG +NTLPIII A+L   +E ELLAV    R  I
Subjt:  KETTNSWSRMHKDLKLEEVNQKQLKLSIEEPPELELKALPQHLKYAYLGTANTLPIIIAANLPKNREEELLAVSESERLNI

A0A6J1DUI2 uncharacterized protein LOC1110241471.4e-3880.19Show/hide
Query:  LENQNLELETMLQRTEDFYYEVLSMDGGKETTNSWSRMHKDLKLEEVNQKQLKLSIEEPPELELKALPQHLKYAYLGTANTLPIIIAANLPKNREEELLA
        + N+NLELE MLQ+ EDFYYEV S+DGGKE TNSWSR H+DLKLEEVNQKQLK S+EEPP+LELKALPQHLKYAYLG ANTLPIIIAANL KN+EEELLA
Subjt:  LENQNLELETMLQRTEDFYYEVLSMDGGKETTNSWSRMHKDLKLEEVNQKQLKLSIEEPPELELKALPQHLKYAYLGTANTLPIIIAANLPKNREEELLA

Query:  VSESER
        V +  R
Subjt:  VSESER

A0A6J1DWH3 uncharacterized protein LOC1110250323.5e-2452.42Show/hide
Query:  AEECFVLRMLDEVERKNASSKFLLENQNLELETMLQRTEDFYYEVLSMDGGKETTNSWSRMHKDLKLEEVNQKQLKLSIEEPPELELKALPQHLKYAYLG
        A E  VLR+LDE   ++ S++ +LE  N E++ ML + ++   E+L +D   +   SWS +H+ L+LE++  KQLK S +EPPELELKALPQHLKYAYL 
Subjt:  AEECFVLRMLDEVERKNASSKFLLENQNLELETMLQRTEDFYYEVLSMDGGKETTNSWSRMHKDLKLEEVNQKQLKLSIEEPPELELKALPQHLKYAYLG

Query:  TANTLPIIIAANLPKNREEELLAV
         +N LPIIIAANL   +E ELLAV
Subjt:  TANTLPIIIAANLPKNREEELLAV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGGTACAAGACCAAGAGATGAAATTTTCAGTGTACGAGTCTTTGAAATACCTTGTAGAAGCTGAGGAGTGTTTTGTGCTCAGAATGTTGGATGAAGTTGAGAGAAA
GAATGCAAGTTCAAAATTTCTGCTTGAAAACCAAAATTTGGAACTGGAAACCATGTTGCAAAGGACTGAAGATTTCTATTATGAAGTGCTTTCTATGGATGGAGGAAAAG
AAACCACAAATTCATGGTCAAGGATGCACAAAGACTTAAAGCTAGAAGAAGTCAATCAGAAACAATTGAAACTGTCAATAGAAGAACCACCAGAATTGGAATTGAAGGCA
TTACCGCAGCATCTTAAGTATGCGTACTTAGGAACAGCCAACACCTTGCCAATAATTATCGCAGCCAATTTGCCTAAGAACAGGGAGGAGGAGTTGCTGGCAGTGTCTGA
AAGCGAAAGACTAAACATAAAGATAGTGCTAAATCCAGAGAAGAGTGAGCAAGGCAATTTCAAGACAGATCAGATTAAAGCTGGAGCGAAGCGAAGCTGGAGCATGGGTT
CACTGTGCAGTAACAGGCAGACACAGGATTTACCGTGTCCGTACAATTTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGGGTACAAGACCAAGAGATGAAATTTTCAGTGTACGAGTCTTTGAAATACCTTGTAGAAGCTGAGGAGTGTTTTGTGCTCAGAATGTTGGATGAAGTTGAGAGAAA
GAATGCAAGTTCAAAATTTCTGCTTGAAAACCAAAATTTGGAACTGGAAACCATGTTGCAAAGGACTGAAGATTTCTATTATGAAGTGCTTTCTATGGATGGAGGAAAAG
AAACCACAAATTCATGGTCAAGGATGCACAAAGACTTAAAGCTAGAAGAAGTCAATCAGAAACAATTGAAACTGTCAATAGAAGAACCACCAGAATTGGAATTGAAGGCA
TTACCGCAGCATCTTAAGTATGCGTACTTAGGAACAGCCAACACCTTGCCAATAATTATCGCAGCCAATTTGCCTAAGAACAGGGAGGAGGAGTTGCTGGCAGTGTCTGA
AAGCGAAAGACTAAACATAAAGATAGTGCTAAATCCAGAGAAGAGTGAGCAAGGCAATTTCAAGACAGATCAGATTAAAGCTGGAGCGAAGCGAAGCTGGAGCATGGGTT
CACTGTGCAGTAACAGGCAGACACAGGATTTACCGTGTCCGTACAATTTTTAG
Protein sequenceShow/hide protein sequence
MRVQDQEMKFSVYESLKYLVEAEECFVLRMLDEVERKNASSKFLLENQNLELETMLQRTEDFYYEVLSMDGGKETTNSWSRMHKDLKLEEVNQKQLKLSIEEPPELELKA
LPQHLKYAYLGTANTLPIIIAANLPKNREEELLAVSESERLNIKIVLNPEKSEQGNFKTDQIKAGAKRSWSMGSLCSNRQTQDLPCPYNF