; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc03g00410 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g00410
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionReverse transcriptase
Genome locationchr3:281860..283113
RNA-Seq ExpressionMoc03g00410
SyntenyMoc03g00410
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022150097.1 uncharacterized protein LOC111018357 [Momordica charantia]9.8e-5246.38Show/hide
Query:  VGQIVNDKKSRPQGTLPGHTKNPKRDREGKEHCKVVITRSALSYDGPSLPDEGTNAVTPVPASTSNPQQEEKAEPVSSEEKGKKADKGKQVVPNTTPQVD
        +GQ+ N+ KSR   TLP  T+ PK  REGKEHCK + T+S L+Y+ P +P E         AS+ + ++E   E                  P+   +++
Subjt:  VGQIVNDKKSRPQGTLPGHTKNPKRDREGKEHCKVVITRSALSYDGPSLPDEGTNAVTPVPASTSNPQQEEKAEPVSSEEKGKKADKGKQVVPNTTPQVD

Query:  ALEQMSNYTKFLKDIISRRKKLGEHETVALTKCSSDALGNPLSIKCKAP--------GEACPITVTLQLADRSIKKLEGKIEDVLVKVDKFIFPVDFIIL
            M+      +DIISRRKKLGEHETVALTKCSSDALGNPL IKCK P        G+A P TVTLQ ADRSI+KLEGKIEDVL+KVDK  FP DFIIL
Subjt:  ALEQMSNYTKFLKDIISRRKKLGEHETVALTKCSSDALGNPLSIKCKAP--------GEACPITVTLQLADRSIKKLEGKIEDVLVKVDKFIFPVDFIIL

Query:  DCEADFE---------------------------VNDEQVTFNVLDAMRLPDVVEECSTI---------------VEDLEADLEAA--EKEFGPILPQFE
        DCE D +                           VNDEQVTFNVLDAMRLPD +EECSTI               +  LE +LE A  E+E    L   E
Subjt:  DCEADFE---------------------------VNDEQVTFNVLDAMRLPDVVEECSTI---------------VEDLEADLEAA--EKEFGPILPQFE

Query:  RFEF
        +FEF
Subjt:  RFEF

XP_022150857.1 uncharacterized protein LOC111018901 [Momordica charantia]4.0e-4556.48Show/hide
Query:  MSNYTKFLKDIISRRKKLGEHETVALTKCSSDALGNPLSIKCKAPG--------------------------------------EACPITVTLQLADRSI
        M NYTKFLKDIISR KKL EHETVALTKCSSDALGNPL +KCK PG                                      EA PITVTLQLA+RSI
Subjt:  MSNYTKFLKDIISRRKKLGEHETVALTKCSSDALGNPLSIKCKAPG--------------------------------------EACPITVTLQLADRSI

Query:  KKLEGKIEDVLVKVDKFIFPVDFI-------------------ILDCEADFEVNDEQVTFNVLDAMRLPDVVEECST-----------IVEDLEADLEAA
        KK EGKIEDVLVKVDKFIFP DFI                   +   E   +VNDEQVTFNVLDAMRLPD VEECST           IVEDLEADLE A
Subjt:  KKLEGKIEDVLVKVDKFIFPVDFI-------------------ILDCEADFEVNDEQVTFNVLDAMRLPDVVEECST-----------IVEDLEADLEAA

Query:  EKEFGPILPQFERFEF
        EKE   ILPQFE   F
Subjt:  EKEFGPILPQFERFEF

XP_022155996.1 uncharacterized protein LOC111022971 [Momordica charantia]1.9e-4742.64Show/hide
Query:  IKSLEMQVGQIVNDKKSRPQGTLPGHTKNPKRDREGKEHCKVVITRSALSYDGPSLPDEGTNAVTPVPASTSNPQQEE------KAEPVSSEEKG-----
        +++LE+Q+GQ+ ND K+RPQG+ P HT+ PKRD  GKE CK V  RS LSY+ P +P E     T +  S S  ++E+      +A   SS+E       
Subjt:  IKSLEMQVGQIVNDKKSRPQGTLPGHTKNPKRDREGKEHCKVVITRSALSYDGPSLPDEGTNAVTPVPASTSNPQQEE------KAEPVSSEEKG-----

Query:  -----------------KKADKGKQVVPNTTPQVDALEQMSNYTKFLKDIISRRKKLGEHETVALTKCSSDALGNPLSIKCKAP----------------
                         K  D  KQ+  N  P +DALEQM NY KFLKDI+SR+KKLGEHE VA+TKCSS+A+G+PL IKCK P                
Subjt:  -----------------KKADKGKQVVPNTTPQVDALEQMSNYTKFLKDIISRRKKLGEHETVALTKCSSDALGNPLSIKCKAP----------------

Query:  ----------------------GEACPITVTLQLADRSIKKLEGKIEDVLVKVDKFIFPVDFIILDCEADFE---------------------------V
                              GEA P TVTLQLADRSIKK EGKI+D    VDKFIFP DFIILDC+AD +                           V
Subjt:  ----------------------GEACPITVTLQLADRSIKKLEGKIEDVLVKVDKFIFPVDFIILDCEADFE---------------------------V

Query:  NDEQVTFNVLDAMRLPDVVEECSTIV
        N+E+V FNVLDAM+LP  +EE + ++
Subjt:  NDEQVTFNVLDAMRLPDVVEECSTIV

XP_022157836.1 uncharacterized protein LOC111024449 [Momordica charantia]4.7e-4637.5Show/hide
Query:  PQQYNKQRGQNTTQQSGSNASLEAMMKKFMT------------------------------RIDAAIKSLEMQVGQIVNDKKSRPQGTLPGHTKNPKRDR
        PQQ+N+Q+  +   Q  + + +E+MMK+ MT                              R DAA+++LE Q+GQ+ ++ K+RP+GTLP  T+ PK   
Subjt:  PQQYNKQRGQNTTQQSGSNASLEAMMKKFMT------------------------------RIDAAIKSLEMQVGQIVNDKKSRPQGTLPGHTKNPKRDR

Query:  EGKEHCKVVITRSALSYDGPSLPDEGTNAVTPVPASTSNPQQEEKAEPVSSEEKGKKADKGKQVVPNTTPQVDALEQMSNYTKFLKDIISRRKKLGEHET
        EG+EHCK + TRS L+Y+ P +P EG++  T    + + P      EP+  E                         M  Y KFLKDII+R+KKLGE+ET
Subjt:  EGKEHCKVVITRSALSYDGPSLPDEGTNAVTPVPASTSNPQQEEKAEPVSSEEKGKKADKGKQVVPNTTPQVDALEQMSNYTKFLKDIISRRKKLGEHET

Query:  VALTKCSSDALGNPLSIKCKAP--------------------------------------GEACPITVTLQLADRSIKKLEGKIEDVLVKVDKFIFPVDF
        VALT+CSS+   + +S K K P                                      G+A P TVTLQLADRSI K EGKIEDVLVKVDKFIFP DF
Subjt:  VALTKCSSDALGNPLSIKCKAP--------------------------------------GEACPITVTLQLADRSIKKLEGKIEDVLVKVDKFIFPVDF

Query:  IILDCEAD---------------------------FEVNDEQVTFNVLDAMRLPDVVEECSTI----------VEDL-----EADLEAAEKE
        IIL+CEAD                             V+D++VTFN+LDAM+ PD +EEC+TI          ++DL     EA LE AEKE
Subjt:  IILDCEAD---------------------------FEVNDEQVTFNVLDAMRLPDVVEECSTI----------VEDL-----EADLEAAEKE

XP_022159235.1 uncharacterized protein LOC111025653 [Momordica charantia]1.5e-4738.01Show/hide
Query:  PQQYNKQRGQ-NTTQQSGSNASL---------EAMMKKFMTRIDAAIK-----------------SLEMQVGQIVNDKKSRPQGTLPGHTKNPKRDREGK
        P QYN+Q+      QQ+ SN  +         +A MK+ MTR D  +K                  LEMQ+GQ+VN+ ++RPQG+LP  T+ P+  R GK
Subjt:  PQQYNKQRGQ-NTTQQSGSNASL---------EAMMKKFMTRIDAAIK-----------------SLEMQVGQIVNDKKSRPQGTLPGHTKNPKRDREGK

Query:  EHCKVVITRSALSYDGPSLPDEGTNA--------------VTPVPASTSNPQQEEKAEPVSSEEK----------GKKADKGKQVVPNTTPQVDALEQMS
        EHC  + TRS L Y+GP +PDE +++              V P  +    PQ      P    ++           K  D  KQ+  N  P V+ALEQM 
Subjt:  EHCKVVITRSALSYDGPSLPDEGTNA--------------VTPVPASTSNPQQEEKAEPVSSEEK----------GKKADKGKQVVPNTTPQVDALEQMS

Query:  NYTKFLKDIISRRKKLGEHETVALTKCSSDALGNPLSIKCKAP--------------------------------------GEACPITVTLQLADRSIKK
         Y KF+KDII+R+KKLGE+ETVALT+CSS+   + +  K K P                                      G+A P TVTLQLADRSI K
Subjt:  NYTKFLKDIISRRKKLGEHETVALTKCSSDALGNPLSIKCKAP--------------------------------------GEACPITVTLQLADRSIKK

Query:  LEGKIEDVLVKVDKFIFPVDFIILDCEAD---------------------------FEVNDEQVTFNVLDAMRLPDVVEECSTIVED-------------
         EGKIEDVLVKVDKFIFP DFIILDCEAD                             V+D++VTFN+LDAM+  D +EEC+ I  D             
Subjt:  LEGKIEDVLVKVDKFIFPVDFIILDCEAD---------------------------FEVNDEQVTFNVLDAMRLPDVVEECSTIVED-------------

Query:  --LEADLEAAEKE
          +EA+LE AEKE
Subjt:  --LEADLEAAEKE

TrEMBL top hitse value%identityAlignment
A0A6J1D9S6 uncharacterized protein LOC1110183574.7e-5246.38Show/hide
Query:  VGQIVNDKKSRPQGTLPGHTKNPKRDREGKEHCKVVITRSALSYDGPSLPDEGTNAVTPVPASTSNPQQEEKAEPVSSEEKGKKADKGKQVVPNTTPQVD
        +GQ+ N+ KSR   TLP  T+ PK  REGKEHCK + T+S L+Y+ P +P E         AS+ + ++E   E                  P+   +++
Subjt:  VGQIVNDKKSRPQGTLPGHTKNPKRDREGKEHCKVVITRSALSYDGPSLPDEGTNAVTPVPASTSNPQQEEKAEPVSSEEKGKKADKGKQVVPNTTPQVD

Query:  ALEQMSNYTKFLKDIISRRKKLGEHETVALTKCSSDALGNPLSIKCKAP--------GEACPITVTLQLADRSIKKLEGKIEDVLVKVDKFIFPVDFIIL
            M+      +DIISRRKKLGEHETVALTKCSSDALGNPL IKCK P        G+A P TVTLQ ADRSI+KLEGKIEDVL+KVDK  FP DFIIL
Subjt:  ALEQMSNYTKFLKDIISRRKKLGEHETVALTKCSSDALGNPLSIKCKAP--------GEACPITVTLQLADRSIKKLEGKIEDVLVKVDKFIFPVDFIIL

Query:  DCEADFE---------------------------VNDEQVTFNVLDAMRLPDVVEECSTI---------------VEDLEADLEAA--EKEFGPILPQFE
        DCE D +                           VNDEQVTFNVLDAMRLPD +EECSTI               +  LE +LE A  E+E    L   E
Subjt:  DCEADFE---------------------------VNDEQVTFNVLDAMRLPDVVEECSTI---------------VEDLEADLEAA--EKEFGPILPQFE

Query:  RFEF
        +FEF
Subjt:  RFEF

A0A6J1DBX0 uncharacterized protein LOC1110189011.9e-4556.48Show/hide
Query:  MSNYTKFLKDIISRRKKLGEHETVALTKCSSDALGNPLSIKCKAPG--------------------------------------EACPITVTLQLADRSI
        M NYTKFLKDIISR KKL EHETVALTKCSSDALGNPL +KCK PG                                      EA PITVTLQLA+RSI
Subjt:  MSNYTKFLKDIISRRKKLGEHETVALTKCSSDALGNPLSIKCKAPG--------------------------------------EACPITVTLQLADRSI

Query:  KKLEGKIEDVLVKVDKFIFPVDFI-------------------ILDCEADFEVNDEQVTFNVLDAMRLPDVVEECST-----------IVEDLEADLEAA
        KK EGKIEDVLVKVDKFIFP DFI                   +   E   +VNDEQVTFNVLDAMRLPD VEECST           IVEDLEADLE A
Subjt:  KKLEGKIEDVLVKVDKFIFPVDFI-------------------ILDCEADFEVNDEQVTFNVLDAMRLPDVVEECST-----------IVEDLEADLEAA

Query:  EKEFGPILPQFERFEF
        EKE   ILPQFE   F
Subjt:  EKEFGPILPQFERFEF

A0A6J1DTH7 uncharacterized protein LOC1110229719.2e-4842.64Show/hide
Query:  IKSLEMQVGQIVNDKKSRPQGTLPGHTKNPKRDREGKEHCKVVITRSALSYDGPSLPDEGTNAVTPVPASTSNPQQEE------KAEPVSSEEKG-----
        +++LE+Q+GQ+ ND K+RPQG+ P HT+ PKRD  GKE CK V  RS LSY+ P +P E     T +  S S  ++E+      +A   SS+E       
Subjt:  IKSLEMQVGQIVNDKKSRPQGTLPGHTKNPKRDREGKEHCKVVITRSALSYDGPSLPDEGTNAVTPVPASTSNPQQEE------KAEPVSSEEKG-----

Query:  -----------------KKADKGKQVVPNTTPQVDALEQMSNYTKFLKDIISRRKKLGEHETVALTKCSSDALGNPLSIKCKAP----------------
                         K  D  KQ+  N  P +DALEQM NY KFLKDI+SR+KKLGEHE VA+TKCSS+A+G+PL IKCK P                
Subjt:  -----------------KKADKGKQVVPNTTPQVDALEQMSNYTKFLKDIISRRKKLGEHETVALTKCSSDALGNPLSIKCKAP----------------

Query:  ----------------------GEACPITVTLQLADRSIKKLEGKIEDVLVKVDKFIFPVDFIILDCEADFE---------------------------V
                              GEA P TVTLQLADRSIKK EGKI+D    VDKFIFP DFIILDC+AD +                           V
Subjt:  ----------------------GEACPITVTLQLADRSIKKLEGKIEDVLVKVDKFIFPVDFIILDCEADFE---------------------------V

Query:  NDEQVTFNVLDAMRLPDVVEECSTIV
        N+E+V FNVLDAM+LP  +EE + ++
Subjt:  NDEQVTFNVLDAMRLPDVVEECSTIV

A0A6J1DY39 uncharacterized protein LOC1110256537.1e-4838.01Show/hide
Query:  PQQYNKQRGQ-NTTQQSGSNASL---------EAMMKKFMTRIDAAIK-----------------SLEMQVGQIVNDKKSRPQGTLPGHTKNPKRDREGK
        P QYN+Q+      QQ+ SN  +         +A MK+ MTR D  +K                  LEMQ+GQ+VN+ ++RPQG+LP  T+ P+  R GK
Subjt:  PQQYNKQRGQ-NTTQQSGSNASL---------EAMMKKFMTRIDAAIK-----------------SLEMQVGQIVNDKKSRPQGTLPGHTKNPKRDREGK

Query:  EHCKVVITRSALSYDGPSLPDEGTNA--------------VTPVPASTSNPQQEEKAEPVSSEEK----------GKKADKGKQVVPNTTPQVDALEQMS
        EHC  + TRS L Y+GP +PDE +++              V P  +    PQ      P    ++           K  D  KQ+  N  P V+ALEQM 
Subjt:  EHCKVVITRSALSYDGPSLPDEGTNA--------------VTPVPASTSNPQQEEKAEPVSSEEK----------GKKADKGKQVVPNTTPQVDALEQMS

Query:  NYTKFLKDIISRRKKLGEHETVALTKCSSDALGNPLSIKCKAP--------------------------------------GEACPITVTLQLADRSIKK
         Y KF+KDII+R+KKLGE+ETVALT+CSS+   + +  K K P                                      G+A P TVTLQLADRSI K
Subjt:  NYTKFLKDIISRRKKLGEHETVALTKCSSDALGNPLSIKCKAP--------------------------------------GEACPITVTLQLADRSIKK

Query:  LEGKIEDVLVKVDKFIFPVDFIILDCEAD---------------------------FEVNDEQVTFNVLDAMRLPDVVEECSTIVED-------------
         EGKIEDVLVKVDKFIFP DFIILDCEAD                             V+D++VTFN+LDAM+  D +EEC+ I  D             
Subjt:  LEGKIEDVLVKVDKFIFPVDFIILDCEAD---------------------------FEVNDEQVTFNVLDAMRLPDVVEECSTIVED-------------

Query:  --LEADLEAAEKE
          +EA+LE AEKE
Subjt:  --LEADLEAAEKE

A0A6J1DZC3 uncharacterized protein LOC1110244492.3e-4637.5Show/hide
Query:  PQQYNKQRGQNTTQQSGSNASLEAMMKKFMT------------------------------RIDAAIKSLEMQVGQIVNDKKSRPQGTLPGHTKNPKRDR
        PQQ+N+Q+  +   Q  + + +E+MMK+ MT                              R DAA+++LE Q+GQ+ ++ K+RP+GTLP  T+ PK   
Subjt:  PQQYNKQRGQNTTQQSGSNASLEAMMKKFMT------------------------------RIDAAIKSLEMQVGQIVNDKKSRPQGTLPGHTKNPKRDR

Query:  EGKEHCKVVITRSALSYDGPSLPDEGTNAVTPVPASTSNPQQEEKAEPVSSEEKGKKADKGKQVVPNTTPQVDALEQMSNYTKFLKDIISRRKKLGEHET
        EG+EHCK + TRS L+Y+ P +P EG++  T    + + P      EP+  E                         M  Y KFLKDII+R+KKLGE+ET
Subjt:  EGKEHCKVVITRSALSYDGPSLPDEGTNAVTPVPASTSNPQQEEKAEPVSSEEKGKKADKGKQVVPNTTPQVDALEQMSNYTKFLKDIISRRKKLGEHET

Query:  VALTKCSSDALGNPLSIKCKAP--------------------------------------GEACPITVTLQLADRSIKKLEGKIEDVLVKVDKFIFPVDF
        VALT+CSS+   + +S K K P                                      G+A P TVTLQLADRSI K EGKIEDVLVKVDKFIFP DF
Subjt:  VALTKCSSDALGNPLSIKCKAP--------------------------------------GEACPITVTLQLADRSIKKLEGKIEDVLVKVDKFIFPVDF

Query:  IILDCEAD---------------------------FEVNDEQVTFNVLDAMRLPDVVEECSTI----------VEDL-----EADLEAAEKE
        IIL+CEAD                             V+D++VTFN+LDAM+ PD +EEC+TI          ++DL     EA LE AEKE
Subjt:  IILDCEAD---------------------------FEVNDEQVTFNVLDAMRLPDVVEECSTI----------VEDL-----EADLEAAEKE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGCAGCCTCAACAATACAATAAGCAAAGAGGTCAAAATACTACTCAGCAAAGTGGTAGCAACGCAAGTTTGGAGGCCATGATGAAAAAGTTCATGACAAGA
ATTGATGCTGCAATAAAAAGCTTGGAGATGCAAGTGGGGCAGATAGTGAATGATAAAAAATCTAGACCCCAAGGAACATTGCCTGGACACACAAAAAACCCGAAG
CGAGATCGTGAGGGAAAGGAGCACTGTAAAGTGGTTATCACGAGAAGCGCATTAAGTTATGATGGACCCTCACTTCCAGACGAAGGAACTAATGCAGTTACACCT
GTTCCTGCATCCACCTCCAATCCACAACAAGAAGAGAAAGCAGAACCTGTAAGTTCAGAAGAAAAAGGTAAGAAGGCGGATAAAGGTAAGCAAGTAGTGCCCAAC
ACTACTCCACAGGTAGATGCTTTAGAACAAATGTCTAACTACACTAAGTTTTTAAAAGACATCATATCTAGGCGTAAGAAGTTGGGTGAGCATGAGACGGTAGCC
TTGACAAAGTGTAGTAGTGATGCTTTAGGGAATCCATTGTCTATTAAATGTAAGGCCCCAGGAGAAGCTTGTCCCATTACTGTCACTTTACAACTAGCAGATAGA
TCCATAAAGAAACTGGAAGGAAAAATAGAAGATGTGCTTGTTAAAGTTGATAAGTTTATTTTTCCTGTCGATTTCATAATTTTGGATTGTGAAGCAGATTTTGAG
GTCAACGATGAGCAAGTAACCTTCAATGTCCTCGATGCGATGCGTCTCCCAGATGTAGTCGAGGAGTGCTCTACAATAGTGGAAGACTTAGAAGCAGATCTGGAG
GCCGCAGAAAAAGAATTTGGCCCAATTTTGCCCCAATTTGAGCGTTTTGAGTTTTTGCAGCCGACAATAGTGGATTTGAAAGCCTTGCAACCTTCCATCATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCGCAGCCTCAACAATACAATAAGCAAAGAGGTCAAAATACTACTCAGCAAAGTGGTAGCAACGCAAGTTTGGAGGCCATGATGAAAAAGTTCATGACAAGA
ATTGATGCTGCAATAAAAAGCTTGGAGATGCAAGTGGGGCAGATAGTGAATGATAAAAAATCTAGACCCCAAGGAACATTGCCTGGACACACAAAAAACCCGAAG
CGAGATCGTGAGGGAAAGGAGCACTGTAAAGTGGTTATCACGAGAAGCGCATTAAGTTATGATGGACCCTCACTTCCAGACGAAGGAACTAATGCAGTTACACCT
GTTCCTGCATCCACCTCCAATCCACAACAAGAAGAGAAAGCAGAACCTGTAAGTTCAGAAGAAAAAGGTAAGAAGGCGGATAAAGGTAAGCAAGTAGTGCCCAAC
ACTACTCCACAGGTAGATGCTTTAGAACAAATGTCTAACTACACTAAGTTTTTAAAAGACATCATATCTAGGCGTAAGAAGTTGGGTGAGCATGAGACGGTAGCC
TTGACAAAGTGTAGTAGTGATGCTTTAGGGAATCCATTGTCTATTAAATGTAAGGCCCCAGGAGAAGCTTGTCCCATTACTGTCACTTTACAACTAGCAGATAGA
TCCATAAAGAAACTGGAAGGAAAAATAGAAGATGTGCTTGTTAAAGTTGATAAGTTTATTTTTCCTGTCGATTTCATAATTTTGGATTGTGAAGCAGATTTTGAG
GTCAACGATGAGCAAGTAACCTTCAATGTCCTCGATGCGATGCGTCTCCCAGATGTAGTCGAGGAGTGCTCTACAATAGTGGAAGACTTAGAAGCAGATCTGGAG
GCCGCAGAAAAAGAATTTGGCCCAATTTTGCCCCAATTTGAGCGTTTTGAGTTTTTGCAGCCGACAATAGTGGATTTGAAAGCCTTGCAACCTTCCATCATTTAA
Protein sequenceShow/hide protein sequence
MSQPQQYNKQRGQNTTQQSGSNASLEAMMKKFMTRIDAAIKSLEMQVGQIVNDKKSRPQGTLPGHTKNPKRDREGKEHCKVVITRSALSYDGPSLPDEGTNAVTP
VPASTSNPQQEEKAEPVSSEEKGKKADKGKQVVPNTTPQVDALEQMSNYTKFLKDIISRRKKLGEHETVALTKCSSDALGNPLSIKCKAPGEACPITVTLQLADR
SIKKLEGKIEDVLVKVDKFIFPVDFIILDCEADFEVNDEQVTFNVLDAMRLPDVVEECSTIVEDLEADLEAAEKEFGPILPQFERFEFLQPTIVDLKALQPSII