; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc03g00460 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g00460
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionStructure-specific endonuclease subunit SLX1 homolog
Genome locationchr3:314324..317388
RNA-Seq ExpressionMoc03g00460
SyntenyMoc03g00460
Gene Ontology termsGO:0000724 - double-strand break repair via homologous recombination (biological process)
GO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0051569 - regulation of histone H3-K4 methylation (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0016593 - Cdc73/Paf1 complex (cellular component)
GO:0033557 - Slx1-Slx4 complex (cellular component)
GO:0000993 - RNA polymerase II complex binding (molecular function)
GO:0008821 - crossover junction endodeoxyribonuclease activity (molecular function)
GO:0017108 - 5'-flap endonuclease activity (molecular function)
InterPro domainsIPR000305 - GIY-YIG endonuclease
IPR027520 - Structure-specific endonuclease subunit Slx1
IPR035901 - GIY-YIG endonuclease superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060004.1 Structure-specific endonuclease subunit SLX1 [Cucumis melo var. makuwa]4.7e-15675Show/hide
Query:  EEENEDEERGNESNGFFSCYLLASACPRYKGHTYIGFTVNPKRRIRQHNGEIGCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSAA
        E+++E+EERGN  NGFFSCYLLASACPR+KGHTYIGFTVNPKRRIRQHNGEI CGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSAA
Subjt:  EEENEDEERGNESNGFFSCYLLASACPRYKGHTYIGFTVNPKRRIRQHNGEIGCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSAA

Query:  ATFKSLSGVANKVKLAYTMLTLPAWCSLNITVNYFSTKYMNNAAGCPSLPEHMKVQVSPIDDLPCYSEGDQGVAENEDDLEYNREYEEVCSFRVYGSTKE
        ATFKSLSGVANKVKLAYTMLTLPAWC LNITVNYFSTK+M NAAGCPSLPEHMKVQVSPID+LPCYSEGDQGV ENEDD EY+RE EE+CSF+VYGS KE
Subjt:  ATFKSLSGVANKVKLAYTMLTLPAWCSLNITVNYFSTKYMNNAAGCPSLPEHMKVQVSPIDDLPCYSEGDQGVAENEDDLEYNREYEEVCSFRVYGSTKE

Query:  VPNEIPQKLTD--------------GCDKELEDSEREPPSSCSPSY--VGMSHDMHGHNKELEDYKRVPPSCAPSYTVAGRSETEIIIEDGEEDQFEGNG
        V NE+PQKL D              GCDKELE +E+ PPSSC+PSY  VGMS+D+   ++ LE+ +R   SC  S TVAG S TEIII+DGEE+QFEG+G
Subjt:  VPNEIPQKLTD--------------GCDKELEDSEREPPSSCSPSY--VGMSHDMHGHNKELEDYKRVPPSCAPSYTVAGRSETEIIIEDGEEDQFEGNG

Query:  VNLQQKPGSTN-------SMSKVGRCNIGYPPS-EYEVIDVCTPSPDCRTSSNSRFKRRITSFVGSEIIDLTKSPTFIRL
        +NLQ++PG  N        +SKV RC+ G  P+ EYEVIDV TPSPDCRTSS+ RFKRR+TS   SE+IDLTKSPTFI+L
Subjt:  VNLQQKPGSTN-------SMSKVGRCNIGYPPS-EYEVIDVCTPSPDCRTSSNSRFKRRITSFVGSEIIDLTKSPTFIRL

XP_004153269.1 structure-specific endonuclease subunit SLX1 homolog [Cucumis sativus]6.6e-15072.89Show/hide
Query:  EEENEDEERGNESNGFFSCYLLASACPRYKGHTYIGFTVNPKRRIRQHNGEIGCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSAA
        +E++E+EERGNE NGFFSCYLLASACPR+KGHTYIGFTVNPKRRIRQHNGEI CGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSAA
Subjt:  EEENEDEERGNESNGFFSCYLLASACPRYKGHTYIGFTVNPKRRIRQHNGEIGCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSAA

Query:  ATFKSLSGVANKVKLAYTMLTLPAWCSLNITVNYFSTKYMNNAAGCPSLPEHMKVQVSPIDDLPCYSEGDQGVAENEDDLEYNREYEEVCSFRVYGSTKE
        ATFKSLSGVANKVKLAYTMLTLPAW  LNITVNYFSTK+M NAAGCPSLPEHMKVQVSPI++LPCYSEGDQ + ENE D EYNRE EE+C FRVYGS KE
Subjt:  ATFKSLSGVANKVKLAYTMLTLPAWCSLNITVNYFSTKYMNNAAGCPSLPEHMKVQVSPIDDLPCYSEGDQGVAENEDDLEYNREYEEVCSFRVYGSTKE

Query:  VPNEIPQKLTD--------------GCDKELEDSEREPPSSCSPSY--VGMSHDMHGHNKELEDYKRVPPSCAPSYTVAGRSETEIIIEDGEEDQFEGNG
        V NE+PQKL D              GCDKELE +E+ PPSSC+PSY  VGMS+D+   ++ LE+ +R   SC  S  VAG S TEI+I+D EE+Q EG+ 
Subjt:  VPNEIPQKLTD--------------GCDKELEDSEREPPSSCSPSY--VGMSHDMHGHNKELEDYKRVPPSCAPSYTVAGRSETEIIIEDGEEDQFEGNG

Query:  VNLQQKPGSTN-------SMSKVGRCNIGYPPS-EYEVIDVCTPSPDCRTSSNSRFKRRITSFVGSEIIDLTKSPTFIRL
        +NLQ++PG  N        +SKV R N G+ P+ EYEVIDV TPSPDCRTSS+ RFKRR+TS   SE+IDLTKSPTFI+L
Subjt:  VNLQQKPGSTN-------SMSKVGRCNIGYPPS-EYEVIDVCTPSPDCRTSSNSRFKRRITSFVGSEIIDLTKSPTFIRL

XP_008457313.1 PREDICTED: uncharacterized protein LOC103497035 [Cucumis melo]4.7e-15675Show/hide
Query:  EEENEDEERGNESNGFFSCYLLASACPRYKGHTYIGFTVNPKRRIRQHNGEIGCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSAA
        E+++E+EERGN  NGFFSCYLLASACPR+KGHTYIGFTVNPKRRIRQHNGEI CGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSAA
Subjt:  EEENEDEERGNESNGFFSCYLLASACPRYKGHTYIGFTVNPKRRIRQHNGEIGCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSAA

Query:  ATFKSLSGVANKVKLAYTMLTLPAWCSLNITVNYFSTKYMNNAAGCPSLPEHMKVQVSPIDDLPCYSEGDQGVAENEDDLEYNREYEEVCSFRVYGSTKE
        ATFKSLSGVANKVKLAYTMLTLPAWC LNITVNYFSTK+M NAAGCPSLPEHMKVQVSPID+LPCYSEGDQGV ENEDD EY+RE EE+CSF+VYGS KE
Subjt:  ATFKSLSGVANKVKLAYTMLTLPAWCSLNITVNYFSTKYMNNAAGCPSLPEHMKVQVSPIDDLPCYSEGDQGVAENEDDLEYNREYEEVCSFRVYGSTKE

Query:  VPNEIPQKLTD--------------GCDKELEDSEREPPSSCSPSY--VGMSHDMHGHNKELEDYKRVPPSCAPSYTVAGRSETEIIIEDGEEDQFEGNG
        V NE+PQKL D              GCDKELE +E+ PPSSC+PSY  VGMS+D+   ++ LE+ +R   SC  S TVAG S TEIII+DGEE+QFEG+G
Subjt:  VPNEIPQKLTD--------------GCDKELEDSEREPPSSCSPSY--VGMSHDMHGHNKELEDYKRVPPSCAPSYTVAGRSETEIIIEDGEEDQFEGNG

Query:  VNLQQKPGSTN-------SMSKVGRCNIGYPPS-EYEVIDVCTPSPDCRTSSNSRFKRRITSFVGSEIIDLTKSPTFIRL
        +NLQ++PG  N        +SKV RC+ G  P+ EYEVIDV TPSPDCRTSS+ RFKRR+TS   SE+IDLTKSPTFI+L
Subjt:  VNLQQKPGSTN-------SMSKVGRCNIGYPPS-EYEVIDVCTPSPDCRTSSNSRFKRRITSFVGSEIIDLTKSPTFIRL

XP_022154854.1 structure-specific endonuclease subunit SLX1 [Momordica charantia]2.1e-21298.35Show/hide
Query:  LSSCVVYLEEENEDEERGNESNGFFSCYLLASACPRYKGHTYIGFTVNPKRRIRQHNGEIGCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNE
        +S  +V  EEENEDEERGNESNGFFSCYLLASACPRYKGHTYIGFTVNPKRRIRQHNGEIGCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNE
Subjt:  LSSCVVYLEEENEDEERGNESNGFFSCYLLASACPRYKGHTYIGFTVNPKRRIRQHNGEIGCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNE

Query:  SLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWCSLNITVNYFSTKYMNNAAGCPSLPEHMKVQVSPIDDLPCYSEGDQGVAENEDDLEYNREYEEVCSF
        SLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWCSLNITVNYFSTKYMNNAAGCPSLPEHMKVQVSPIDDLPCYSEGDQGVAENEDDLEYNREYEEVCSF
Subjt:  SLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWCSLNITVNYFSTKYMNNAAGCPSLPEHMKVQVSPIDDLPCYSEGDQGVAENEDDLEYNREYEEVCSF

Query:  RVYGSTKEVPNEIPQKLTDGCDKELEDSEREPPSSCSPSYVGMSHDMHGHNKELEDYKRVPPSCAPSYTVAGRSETEIIIEDGEEDQFEGNGVNLQQKPG
        RVYGSTKEVPNEIPQKLTDGCDKELEDSEREPPSSCSPSYVGMSHDMHGHNKELEDYKRVPPSCAPSYTVAGRSETEIIIEDGEEDQFEGNGVNLQQKPG
Subjt:  RVYGSTKEVPNEIPQKLTDGCDKELEDSEREPPSSCSPSYVGMSHDMHGHNKELEDYKRVPPSCAPSYTVAGRSETEIIIEDGEEDQFEGNGVNLQQKPG

Query:  STNSMSKVGRCNIGYPPSEYEVIDVCTPSPDCRTSSNSRFKRRITSFVGSEIIDLTKSPTFIRL
        STNSMSKVGRCNIGYPPSEYEVIDVCTPSPDCRTSSNSRFKRRITSFVGSEIIDLTKSPTFIRL
Subjt:  STNSMSKVGRCNIGYPPSEYEVIDVCTPSPDCRTSSNSRFKRRITSFVGSEIIDLTKSPTFIRL

XP_038894793.1 structure-specific endonuclease subunit SLX1 [Benincasa hispida]1.1e-15775.13Show/hide
Query:  EEENEDEERGNESNGFFSCYLLASACPRYKGHTYIGFTVNPKRRIRQHNGEIGCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSAA
        +E+ E+EE  NE NGFFSCYLLASACPRYKGHTYIGFTVNPKRRIRQHNGEI CGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSAA
Subjt:  EEENEDEERGNESNGFFSCYLLASACPRYKGHTYIGFTVNPKRRIRQHNGEIGCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSAA

Query:  ATFKSLSGVANKVKLAYTMLTLPAWCSLNITVNYFSTKYMNNAAGCPSLPEHMKVQVSPIDDLPCYSEGDQGVAENEDDLEYNREYEEVCSFRVYGSTKE
        ATFKSLSGVANKVKLAYTMLTLPAWCSLNITVNYFSTKYM NAAGCPSLP+HMKVQVSPI++LPCYSEGDQ V ENEDD EYNRE EE+CSFRVYGS KE
Subjt:  ATFKSLSGVANKVKLAYTMLTLPAWCSLNITVNYFSTKYMNNAAGCPSLPEHMKVQVSPIDDLPCYSEGDQGVAENEDDLEYNREYEEVCSFRVYGSTKE

Query:  VPNEIPQKLTD-------------GCDKELEDSEREPPSSCSPSYV--GMSHDMHGHNKELEDYKRVPPSCAPSYTVAGRSETEIIIEDGEEDQFEGNGV
        V NE+PQKL D             GCDKE E++E+ PPSSC+PSY+  GMS+D+HG ++ELE+ +R P SCAPS  V   S TEIII+DG+EDQ EG G+
Subjt:  VPNEIPQKLTD-------------GCDKELEDSEREPPSSCSPSYV--GMSHDMHGHNKELEDYKRVPPSCAPSYTVAGRSETEIIIEDGEEDQFEGNGV

Query:  NLQQK-------PGSTNSMSKVGRCNIGYPPSEYEVIDVCTPSPDCRTSSNSRFKRRITSFVGSEIIDLTKSPTFIRL
        NL+Q+        G  + +SKV RCNI  PP EYEVIDV TPSPDCRT+S+ R KR++TS   SEIIDLTKSPTFI+L
Subjt:  NLQQK-------PGSTNSMSKVGRCNIGYPPSEYEVIDVCTPSPDCRTSSNSRFKRRITSFVGSEIIDLTKSPTFIRL

TrEMBL top hitse value%identityAlignment
A0A0A0M0Y6 Structure-specific endonuclease subunit SLX1 homolog3.2e-15072.89Show/hide
Query:  EEENEDEERGNESNGFFSCYLLASACPRYKGHTYIGFTVNPKRRIRQHNGEIGCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSAA
        +E++E+EERGNE NGFFSCYLLASACPR+KGHTYIGFTVNPKRRIRQHNGEI CGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSAA
Subjt:  EEENEDEERGNESNGFFSCYLLASACPRYKGHTYIGFTVNPKRRIRQHNGEIGCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSAA

Query:  ATFKSLSGVANKVKLAYTMLTLPAWCSLNITVNYFSTKYMNNAAGCPSLPEHMKVQVSPIDDLPCYSEGDQGVAENEDDLEYNREYEEVCSFRVYGSTKE
        ATFKSLSGVANKVKLAYTMLTLPAW  LNITVNYFSTK+M NAAGCPSLPEHMKVQVSPI++LPCYSEGDQ + ENE D EYNRE EE+C FRVYGS KE
Subjt:  ATFKSLSGVANKVKLAYTMLTLPAWCSLNITVNYFSTKYMNNAAGCPSLPEHMKVQVSPIDDLPCYSEGDQGVAENEDDLEYNREYEEVCSFRVYGSTKE

Query:  VPNEIPQKLTD--------------GCDKELEDSEREPPSSCSPSY--VGMSHDMHGHNKELEDYKRVPPSCAPSYTVAGRSETEIIIEDGEEDQFEGNG
        V NE+PQKL D              GCDKELE +E+ PPSSC+PSY  VGMS+D+   ++ LE+ +R   SC  S  VAG S TEI+I+D EE+Q EG+ 
Subjt:  VPNEIPQKLTD--------------GCDKELEDSEREPPSSCSPSY--VGMSHDMHGHNKELEDYKRVPPSCAPSYTVAGRSETEIIIEDGEEDQFEGNG

Query:  VNLQQKPGSTN-------SMSKVGRCNIGYPPS-EYEVIDVCTPSPDCRTSSNSRFKRRITSFVGSEIIDLTKSPTFIRL
        +NLQ++PG  N        +SKV R N G+ P+ EYEVIDV TPSPDCRTSS+ RFKRR+TS   SE+IDLTKSPTFI+L
Subjt:  VNLQQKPGSTN-------SMSKVGRCNIGYPPS-EYEVIDVCTPSPDCRTSSNSRFKRRITSFVGSEIIDLTKSPTFIRL

A0A1S3C574 Structure-specific endonuclease subunit SLX1 homolog2.3e-15675Show/hide
Query:  EEENEDEERGNESNGFFSCYLLASACPRYKGHTYIGFTVNPKRRIRQHNGEIGCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSAA
        E+++E+EERGN  NGFFSCYLLASACPR+KGHTYIGFTVNPKRRIRQHNGEI CGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSAA
Subjt:  EEENEDEERGNESNGFFSCYLLASACPRYKGHTYIGFTVNPKRRIRQHNGEIGCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSAA

Query:  ATFKSLSGVANKVKLAYTMLTLPAWCSLNITVNYFSTKYMNNAAGCPSLPEHMKVQVSPIDDLPCYSEGDQGVAENEDDLEYNREYEEVCSFRVYGSTKE
        ATFKSLSGVANKVKLAYTMLTLPAWC LNITVNYFSTK+M NAAGCPSLPEHMKVQVSPID+LPCYSEGDQGV ENEDD EY+RE EE+CSF+VYGS KE
Subjt:  ATFKSLSGVANKVKLAYTMLTLPAWCSLNITVNYFSTKYMNNAAGCPSLPEHMKVQVSPIDDLPCYSEGDQGVAENEDDLEYNREYEEVCSFRVYGSTKE

Query:  VPNEIPQKLTD--------------GCDKELEDSEREPPSSCSPSY--VGMSHDMHGHNKELEDYKRVPPSCAPSYTVAGRSETEIIIEDGEEDQFEGNG
        V NE+PQKL D              GCDKELE +E+ PPSSC+PSY  VGMS+D+   ++ LE+ +R   SC  S TVAG S TEIII+DGEE+QFEG+G
Subjt:  VPNEIPQKLTD--------------GCDKELEDSEREPPSSCSPSY--VGMSHDMHGHNKELEDYKRVPPSCAPSYTVAGRSETEIIIEDGEEDQFEGNG

Query:  VNLQQKPGSTN-------SMSKVGRCNIGYPPS-EYEVIDVCTPSPDCRTSSNSRFKRRITSFVGSEIIDLTKSPTFIRL
        +NLQ++PG  N        +SKV RC+ G  P+ EYEVIDV TPSPDCRTSS+ RFKRR+TS   SE+IDLTKSPTFI+L
Subjt:  VNLQQKPGSTN-------SMSKVGRCNIGYPPS-EYEVIDVCTPSPDCRTSSNSRFKRRITSFVGSEIIDLTKSPTFIRL

A0A5D3BBR0 Structure-specific endonuclease subunit SLX1 homolog2.3e-15675Show/hide
Query:  EEENEDEERGNESNGFFSCYLLASACPRYKGHTYIGFTVNPKRRIRQHNGEIGCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSAA
        E+++E+EERGN  NGFFSCYLLASACPR+KGHTYIGFTVNPKRRIRQHNGEI CGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSAA
Subjt:  EEENEDEERGNESNGFFSCYLLASACPRYKGHTYIGFTVNPKRRIRQHNGEIGCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSAA

Query:  ATFKSLSGVANKVKLAYTMLTLPAWCSLNITVNYFSTKYMNNAAGCPSLPEHMKVQVSPIDDLPCYSEGDQGVAENEDDLEYNREYEEVCSFRVYGSTKE
        ATFKSLSGVANKVKLAYTMLTLPAWC LNITVNYFSTK+M NAAGCPSLPEHMKVQVSPID+LPCYSEGDQGV ENEDD EY+RE EE+CSF+VYGS KE
Subjt:  ATFKSLSGVANKVKLAYTMLTLPAWCSLNITVNYFSTKYMNNAAGCPSLPEHMKVQVSPIDDLPCYSEGDQGVAENEDDLEYNREYEEVCSFRVYGSTKE

Query:  VPNEIPQKLTD--------------GCDKELEDSEREPPSSCSPSY--VGMSHDMHGHNKELEDYKRVPPSCAPSYTVAGRSETEIIIEDGEEDQFEGNG
        V NE+PQKL D              GCDKELE +E+ PPSSC+PSY  VGMS+D+   ++ LE+ +R   SC  S TVAG S TEIII+DGEE+QFEG+G
Subjt:  VPNEIPQKLTD--------------GCDKELEDSEREPPSSCSPSY--VGMSHDMHGHNKELEDYKRVPPSCAPSYTVAGRSETEIIIEDGEEDQFEGNG

Query:  VNLQQKPGSTN-------SMSKVGRCNIGYPPS-EYEVIDVCTPSPDCRTSSNSRFKRRITSFVGSEIIDLTKSPTFIRL
        +NLQ++PG  N        +SKV RC+ G  P+ EYEVIDV TPSPDCRTSS+ RFKRR+TS   SE+IDLTKSPTFI+L
Subjt:  VNLQQKPGSTN-------SMSKVGRCNIGYPPS-EYEVIDVCTPSPDCRTSSNSRFKRRITSFVGSEIIDLTKSPTFIRL

A0A6J1DNH4 Structure-specific endonuclease subunit SLX1 homolog1.0e-21298.35Show/hide
Query:  LSSCVVYLEEENEDEERGNESNGFFSCYLLASACPRYKGHTYIGFTVNPKRRIRQHNGEIGCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNE
        +S  +V  EEENEDEERGNESNGFFSCYLLASACPRYKGHTYIGFTVNPKRRIRQHNGEIGCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNE
Subjt:  LSSCVVYLEEENEDEERGNESNGFFSCYLLASACPRYKGHTYIGFTVNPKRRIRQHNGEIGCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNE

Query:  SLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWCSLNITVNYFSTKYMNNAAGCPSLPEHMKVQVSPIDDLPCYSEGDQGVAENEDDLEYNREYEEVCSF
        SLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWCSLNITVNYFSTKYMNNAAGCPSLPEHMKVQVSPIDDLPCYSEGDQGVAENEDDLEYNREYEEVCSF
Subjt:  SLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWCSLNITVNYFSTKYMNNAAGCPSLPEHMKVQVSPIDDLPCYSEGDQGVAENEDDLEYNREYEEVCSF

Query:  RVYGSTKEVPNEIPQKLTDGCDKELEDSEREPPSSCSPSYVGMSHDMHGHNKELEDYKRVPPSCAPSYTVAGRSETEIIIEDGEEDQFEGNGVNLQQKPG
        RVYGSTKEVPNEIPQKLTDGCDKELEDSEREPPSSCSPSYVGMSHDMHGHNKELEDYKRVPPSCAPSYTVAGRSETEIIIEDGEEDQFEGNGVNLQQKPG
Subjt:  RVYGSTKEVPNEIPQKLTDGCDKELEDSEREPPSSCSPSYVGMSHDMHGHNKELEDYKRVPPSCAPSYTVAGRSETEIIIEDGEEDQFEGNGVNLQQKPG

Query:  STNSMSKVGRCNIGYPPSEYEVIDVCTPSPDCRTSSNSRFKRRITSFVGSEIIDLTKSPTFIRL
        STNSMSKVGRCNIGYPPSEYEVIDVCTPSPDCRTSSNSRFKRRITSFVGSEIIDLTKSPTFIRL
Subjt:  STNSMSKVGRCNIGYPPSEYEVIDVCTPSPDCRTSSNSRFKRRITSFVGSEIIDLTKSPTFIRL

A0A6J1I681 Structure-specific endonuclease subunit SLX1 homolog1.3e-13867.37Show/hide
Query:  EEENEDEERGNESNGFFSCYLLASACPRYKGHTYIGFTVNPKRRIRQHNGEIGCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSAA
        +E++EDEERGNE NGFFSCYLLASACPRYKGHTYIGFTVNPKRRIRQHNGEI CGAWRTKRKRPWEMV CIYGFPTNVSALQFEWAWQHPNESLAVRSAA
Subjt:  EEENEDEERGNESNGFFSCYLLASACPRYKGHTYIGFTVNPKRRIRQHNGEIGCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSAA

Query:  ATFKSLSGVANKVKLAYTMLTLPAWCSLNITVNYFSTKYMNNAAGCPSLPEHMKVQVSPIDDLPCYSEGDQGVAENEDDLEYNREYEEVCSFRVYGSTKE
        ATFKSLSG+ANK+KLAYTMLTLPAWCSLNITVNYFSTKYMNNAAGCPSLP HM+VQ+SPID+LPCYSEGD+ V ENE+D EYN+EYEEVCS +V+G   E
Subjt:  ATFKSLSGVANKVKLAYTMLTLPAWCSLNITVNYFSTKYMNNAAGCPSLPEHMKVQVSPIDDLPCYSEGDQGVAENEDDLEYNREYEEVCSFRVYGSTKE

Query:  VPNEIPQKLTD-------------GCDKELEDSEREPPSSCSPSY--VGMSHDMHGHNKELEDYKRVPPSCAPSYTVAGRSETEIIIEDGEEDQFEGNGV
        VPNEIPQ L D             G D+EL+D+E+ P SSC+PSY  VG+S+D+ G +++       P  CA   TV G   TEIII+DGEE+Q EG+G+
Subjt:  VPNEIPQKLTD-------------GCDKELEDSEREPPSSCSPSY--VGMSHDMHGHNKELEDYKRVPPSCAPSYTVAGRSETEIIIEDGEEDQFEGNGV

Query:  NLQQKPGSTNSMS----KVGRCNIGYPPSEYEVIDVCTPSPDCRTSSNSRFKRRITS---------FVGSEIIDLTKSPT
         LQQ+PG   ++S    ++ + + G PP EYEVIDV TPSP CRTSS+ +FKRR+ +          VGS ++D  +  T
Subjt:  NLQQKPGSTNSMS----KVGRCNIGYPPSEYEVIDVCTPSPDCRTSSNSRFKRRITS---------FVGSEIIDLTKSPT

SwissProt top hitse value%identityAlignment
Q0IH86 Structure-specific endonuclease subunit slx11.1e-2538.96Show/hide
Query:  ESNGFFSCYLLASACPRYKGHTYIGFTVNPKRRIRQHN-GEIGCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSAAATFKSLSGVA
        E  GF+  YLL    P+YKG  YIGFTVNP+RRI+QHN G+   GAW+T  + PW+MVL ++GFP +++AL+FEWAWQHP+ S  +       K  S   
Subjt:  ESNGFFSCYLLASACPRYKGHTYIGFTVNPKRRIRQHN-GEIGCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSAAATFKSLSGVA

Query:  NKVKLAYTMLTLPAWCSLNITVNYFSTKYMNNAAGCPSLPEHMKVQVSPIDDLP
          + +   ML +  W  L +T+ +   +Y          P HM +    +   P
Subjt:  NKVKLAYTMLTLPAWCSLNITVNYFSTKYMNNAAGCPSLPEHMKVQVSPIDDLP

Q32PI0 Structure-specific endonuclease subunit SLX11.9e-2741.38Show/hide
Query:  FFSCYLLASACPRYKGHTYIGFTVNPKRRIRQHN-GEIGCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVK
        FF  YLL    PR++G  Y+GFTVNP RR++QHN G    GAWRT  + PWEMVL ++GFP+ V+AL+FEWAWQHP  S  +       +  +  A  ++
Subjt:  FFSCYLLASACPRYKGHTYIGFTVNPKRRIRQHN-GEIGCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVK

Query:  LAYTMLTLPAWCSLNITVNYFSTKYMNNAAGCPSLPEHMKVQVSP
        +   ML  P W  L +T+ +    +  +   CP  P HM +   P
Subjt:  LAYTMLTLPAWCSLNITVNYFSTKYMNNAAGCPSLPEHMKVQVSP

Q5PQP5 Structure-specific endonuclease subunit SLX11.3e-2840.12Show/hide
Query:  FFSCYLLASACPRYKGHTYIGFTVNPKRRIRQHN-GEIGCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVK
        FF  YLL    PR++G  Y+GFTVNP RR+RQHN G    GAWRT  + PW+MVL ++GFP+ V+AL+FEWAWQHP  S  +       +S +     ++
Subjt:  FFSCYLLASACPRYKGHTYIGFTVNPKRRIRQHN-GEIGCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVK

Query:  LAYTMLTLPAWCSLNITVNYFSTKYMNNAAGCPSLPEHMKVQVSP------IDDLPCYSEGD
        +   ML +P W  L +TV +    + +    CP+ P HM +   P      +   P  SE D
Subjt:  LAYTMLTLPAWCSLNITVNYFSTKYMNNAAGCPSLPEHMKVQVSP------IDDLPCYSEGD

Q8BX32 Structure-specific endonuclease subunit SLX14.6e-2940.74Show/hide
Query:  FFSCYLLASACPRYKGHTYIGFTVNPKRRIRQHN-GEIGCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVK
        FF  YLL    PR++G  Y+GFTVNP RR+RQHN G    GAWRT  + PW+MVL I+GFP+ V+AL+FEWAWQHP  S  +       +S +  A  ++
Subjt:  FFSCYLLASACPRYKGHTYIGFTVNPKRRIRQHN-GEIGCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVK

Query:  LAYTMLTLPAWCSLNITVNYFSTKYMNNAAGCPSLPEHMKVQVSP------IDDLPCYSEGD
        +   ML +P W  L +T+ +    + +    CP+ P HM +   P      +   P  SE D
Subjt:  LAYTMLTLPAWCSLNITVNYFSTKYMNNAAGCPSLPEHMKVQVSP------IDDLPCYSEGD

Q9BQ83 Structure-specific endonuclease subunit SLX11.4e-2540Show/hide
Query:  FFSCYLLASACPRYKGHTYIGFTVNPKRRIRQHN-GEIGCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVK
        FF  YLL    PRY+G  Y+GFTVN  RR++QHN G    GAWRT  + PWEMVL ++GFP++V+AL+FEWAWQHP+ S  +       +  +  A  ++
Subjt:  FFSCYLLASACPRYKGHTYIGFTVNPKRRIRQHN-GEIGCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVK

Query:  LAYTMLTLPAWCSLNITVNYFSTKYMNNAAGCPSLPEHMKVQVSP
        +   ML  P W  L +T+ +       +   C   P H+ +   P
Subjt:  LAYTMLTLPAWCSLNITVNYFSTKYMNNAAGCPSLPEHMKVQVSP

Arabidopsis top hitse value%identityAlignment
AT2G30350.1 Excinuclease ABC, C subunit, N-terminal1.3e-3438.33Show/hide
Query:  LQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWCSLNITVNYFSTKYMNNAAGCPSLPEHMKVQVSPIDDLPCYSE-GDQGVAENEDD
        LQFEWAWQHP ES+AVR AAA FKS SGVA+K+KL YTML LPAW SLN+TVNYFS+KY ++    PSLP HMKVQV  ++DL  +++  D    E+E+ 
Subjt:  LQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWCSLNITVNYFSTKYMNNAAGCPSLPEHMKVQVSPIDDLPCYSE-GDQGVAENEDD

Query:  LEYNREYEE------------------VCSFRVYGSTKEVPNEIPQ--KLTDGCDKELEDSEREPPSSCSPSYVGMSHDMHGHNKELEDYKRVPPSCAPS
         E N E ++                      R +   KE      +  +L +     L D E       S   VG    +    KE E    V      S
Subjt:  LEYNREYEE------------------VCSFRVYGSTKEVPNEIPQ--KLTDGCDKELEDSEREPPSSCSPSYVGMSHDMHGHNKELEDYKRVPPSCAPS

Query:  YTVAGRSETEIIIEDGEEDQFEGNGVNLQQKPGSTNSMSKVGRCNIGYPPS-----EYEVIDVCTPSPDCRTSSNSRFKRRITSFVGSEIIDLTKSPTFI
        +T  G      ++E  E++   G         GST +M K  R    +  S     + EVID+ TPSP CR  S+ + +RR+     SE IDLT SP FI
Subjt:  YTVAGRSETEIIIEDGEEDQFEGNGVNLQQKPGSTNSMSKVGRCNIGYPPS-----EYEVIDVCTPSPDCRTSSNSRFKRRITSFVGSEIIDLTKSPTFI

AT2G30350.2 Excinuclease ABC, C subunit, N-terminal3.7e-7445.93Show/hide
Query:  LEEENEDEERGNESNGFFSCYLLASACPRYKGHTYIGFTVNPKRRIRQHNGEIGCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSA
        L+   ED   G +  GFF+CYLL S  PR+KG TYIGFTVNP+RRIRQHNGEI  GAWRTK+KRPWEMVLCIYGFPTNVSALQFEWAWQHP ES+AVR A
Subjt:  LEEENEDEERGNESNGFFSCYLLASACPRYKGHTYIGFTVNPKRRIRQHNGEIGCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSA

Query:  AATFKSLSGVANKVKLAYTMLTLPAWCSLNITVNYFSTKYMNNAAGCPSLPEHMKVQVSPIDDLPCYSE-GDQGVAENEDDLEYNREYEE----------
        AA FKS SGVA+K+KL YTML LPAW SLN+TVNYFS+KY ++    PSLP HMKVQV  ++DL  +++  D    E+E+  E N E ++          
Subjt:  AATFKSLSGVANKVKLAYTMLTLPAWCSLNITVNYFSTKYMNNAAGCPSLPEHMKVQVSPIDDLPCYSE-GDQGVAENEDDLEYNREYEE----------

Query:  --------VCSFRVYGSTKEVPNEIPQ--KLTDGCDKELEDSEREPPSSCSPSYVGMSHDMHGHNKELEDYKRVPPSCAPSYTVAGRSETEIIIEDGEED
                    R +   KE      +  +L +     L D E       S   VG    +    KE E    V      S+T  G      ++E  E++
Subjt:  --------VCSFRVYGSTKEVPNEIPQ--KLTDGCDKELEDSEREPPSSCSPSYVGMSHDMHGHNKELEDYKRVPPSCAPSYTVAGRSETEIIIEDGEED

Query:  QFEGNGVNLQQKPGSTNSMSKVGRCNIGYPPS-----EYEVIDVCTPSPDCRTSSNSRFKRRITSFVGSEIIDLTKSPTFI
           G         GST +M K  R    +  S     + EVID+ TPSP CR  S+ + +RR+     SE IDLT SP FI
Subjt:  QFEGNGVNLQQKPGSTNSMSKVGRCNIGYPPS-----EYEVIDVCTPSPDCRTSSNSRFKRRITSFVGSEIIDLTKSPTFI

AT5G14602.1 FUNCTIONS IN: molecular_function unknown1.1e-0945.45Show/hide
Query:  MCPLRFILIFLSATLAGFFVLRNLKSQPQDFEAADDNSDAHSNDSSAAHSSNSTSKVSSGFWTVVDMASGRYLWRHL
        MCPLRF+L+F SA LAG+   R + S P+ F  +D+   A + +       +   K+ +G WT VDMASGRYLWR+L
Subjt:  MCPLRFILIFLSATLAGFFVLRNLKSQPQDFEAADDNSDAHSNDSSAAHSSNSTSKVSSGFWTVVDMASGRYLWRHL

AT5G18150.1 Methyltransferase-related protein9.9e-1144.16Show/hide
Query:  MCPLRFILIFLSATLAGFFVLRNLKSQPQDFEAADDNSDAHSNDSSAAHSSNSTSKVSSGFWTVVDMASGRYLWRHL
        MCP+RF+L+F SA LAG+F  + + S P +F++ D+ ++            N   K+ +GFW  VDMASGRYLWR+L
Subjt:  MCPLRFILIFLSATLAGFFVLRNLKSQPQDFEAADDNSDAHSNDSSAAHSSNSTSKVSSGFWTVVDMASGRYLWRHL

AT5G58375.1 Methyltransferase-related protein1.2e-1358.97Show/hide
Query:  MCPLRFILIFLSATLAGFFVLRNLKSQPQDFEAADDNSDA-HSNDSSAAHSSNSTSKVSSGFWTVVDMASGRYLWRHL
        MCPLR ILIFLSATLAGFFVL+ L S   D    D  +DA H++D S +  S     + SGFWT VDMASGRYLW +L
Subjt:  MCPLRFILIFLSATLAGFFVLRNLKSQPQDFEAADDNSDA-HSNDSSAAHSSNSTSKVSSGFWTVVDMASGRYLWRHL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTCCGCTGAGATTTATTCTGATATTTCTCTCAGCGACTCTTGCCGGCTTCTTCGTTCTCCGGAACCTCAAATCTCAACCTCAAGATTTCGAGGCCGCCGACGACAA
TTCCGACGCCCACTCCAACGATTCCTCTGCTGCTCATTCTTCCAATTCCACCTCCAAGGTGTCTTCGGGGTTCTGGACGGTGGTCGACATGGCCAGCGGCCGCTACTTGT
GGAGGCATTTGTTTCCGTCGTCATCGTTTGCTATGCTATTGCTGGATGAATGCACCTTGTCTTCTTGTGTTGTATATCTCGAGGAGGAAAATGAAGACGAAGAGAGGGGC
AATGAATCGAACGGCTTCTTCTCATGCTATCTCTTGGCTTCTGCTTGCCCTCGTTACAAAGGCCATACCTATATCGGATTCACAGTGAACCCAAAACGTAGAATCAGGCA
GCACAATGGTGAAATTGGATGCGGTGCGTGGCGTACTAAAAGGAAGAGACCTTGGGAGATGGTCTTGTGCATTTATGGCTTCCCCACTAATGTCTCTGCTCTCCAGTTTG
AATGGGCGTGGCAGCACCCTAATGAGTCATTGGCTGTAAGAAGTGCTGCTGCAACTTTCAAGTCTCTCTCTGGAGTTGCCAACAAAGTTAAACTTGCATACACAATGCTC
ACACTTCCAGCTTGGTGCAGTTTGAATATCACTGTAAACTACTTCTCAACAAAGTACATGAATAATGCCGCTGGTTGCCCAAGTTTGCCAGAGCATATGAAGGTCCAAGT
TTCCCCCATTGATGACCTTCCATGTTATTCTGAAGGAGACCAAGGTGTAGCTGAAAATGAAGATGACTTGGAGTACAACAGAGAGTACGAAGAAGTTTGCAGTTTTCGAG
TATATGGATCGACAAAAGAAGTTCCAAATGAAATTCCTCAAAAGTTAACGGATGGATGCGATAAAGAACTTGAGGACAGTGAACGAGAGCCACCTTCTTCGTGTAGTCCG
TCCTATGTGGGTATGTCCCATGACATGCATGGACACAATAAAGAACTTGAGGATTATAAACGAGTGCCACCTTCGTGTGCTCCGTCTTATACTGTTGCGGGTAGGTCCGA
GACTGAAATCATCATTGAAGATGGAGAGGAAGACCAATTTGAAGGGAATGGTGTGAACTTGCAGCAGAAACCTGGTAGTACGAATTCAATGAGCAAAGTTGGGAGGTGTA
ATATTGGGTATCCCCCTAGTGAGTATGAGGTTATAGATGTGTGTACCCCATCTCCCGACTGCAGAACAAGTTCCAACAGTCGATTCAAGAGAAGAATTACTTCTTTTGTT
GGGTCTGAGATTATTGACTTGACCAAATCTCCTACGTTTATCCGATTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTGTCCGCTGAGATTTATTCTGATATTTCTCTCAGCGACTCTTGCCGGCTTCTTCGTTCTCCGGAACCTCAAATCTCAACCTCAAGATTTCGAGGCCGCCGACGACAA
TTCCGACGCCCACTCCAACGATTCCTCTGCTGCTCATTCTTCCAATTCCACCTCCAAGGTGTCTTCGGGGTTCTGGACGGTGGTCGACATGGCCAGCGGCCGCTACTTGT
GGAGGCATTTGTTTCCGTCGTCATCGTTTGCTATGCTATTGCTGGATGAATGCACCTTGTCTTCTTGTGTTGTATATCTCGAGGAGGAAAATGAAGACGAAGAGAGGGGC
AATGAATCGAACGGCTTCTTCTCATGCTATCTCTTGGCTTCTGCTTGCCCTCGTTACAAAGGCCATACCTATATCGGATTCACAGTGAACCCAAAACGTAGAATCAGGCA
GCACAATGGTGAAATTGGATGCGGTGCGTGGCGTACTAAAAGGAAGAGACCTTGGGAGATGGTCTTGTGCATTTATGGCTTCCCCACTAATGTCTCTGCTCTCCAGTTTG
AATGGGCGTGGCAGCACCCTAATGAGTCATTGGCTGTAAGAAGTGCTGCTGCAACTTTCAAGTCTCTCTCTGGAGTTGCCAACAAAGTTAAACTTGCATACACAATGCTC
ACACTTCCAGCTTGGTGCAGTTTGAATATCACTGTAAACTACTTCTCAACAAAGTACATGAATAATGCCGCTGGTTGCCCAAGTTTGCCAGAGCATATGAAGGTCCAAGT
TTCCCCCATTGATGACCTTCCATGTTATTCTGAAGGAGACCAAGGTGTAGCTGAAAATGAAGATGACTTGGAGTACAACAGAGAGTACGAAGAAGTTTGCAGTTTTCGAG
TATATGGATCGACAAAAGAAGTTCCAAATGAAATTCCTCAAAAGTTAACGGATGGATGCGATAAAGAACTTGAGGACAGTGAACGAGAGCCACCTTCTTCGTGTAGTCCG
TCCTATGTGGGTATGTCCCATGACATGCATGGACACAATAAAGAACTTGAGGATTATAAACGAGTGCCACCTTCGTGTGCTCCGTCTTATACTGTTGCGGGTAGGTCCGA
GACTGAAATCATCATTGAAGATGGAGAGGAAGACCAATTTGAAGGGAATGGTGTGAACTTGCAGCAGAAACCTGGTAGTACGAATTCAATGAGCAAAGTTGGGAGGTGTA
ATATTGGGTATCCCCCTAGTGAGTATGAGGTTATAGATGTGTGTACCCCATCTCCCGACTGCAGAACAAGTTCCAACAGTCGATTCAAGAGAAGAATTACTTCTTTTGTT
GGGTCTGAGATTATTGACTTGACCAAATCTCCTACGTTTATCCGATTGTAG
Protein sequenceShow/hide protein sequence
MCPLRFILIFLSATLAGFFVLRNLKSQPQDFEAADDNSDAHSNDSSAAHSSNSTSKVSSGFWTVVDMASGRYLWRHLFPSSSFAMLLLDECTLSSCVVYLEEENEDEERG
NESNGFFSCYLLASACPRYKGHTYIGFTVNPKRRIRQHNGEIGCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTML
TLPAWCSLNITVNYFSTKYMNNAAGCPSLPEHMKVQVSPIDDLPCYSEGDQGVAENEDDLEYNREYEEVCSFRVYGSTKEVPNEIPQKLTDGCDKELEDSEREPPSSCSP
SYVGMSHDMHGHNKELEDYKRVPPSCAPSYTVAGRSETEIIIEDGEEDQFEGNGVNLQQKPGSTNSMSKVGRCNIGYPPSEYEVIDVCTPSPDCRTSSNSRFKRRITSFV
GSEIIDLTKSPTFIRL