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Moc03g00910 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g00910
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionATP-dependent RNA helicase dbp-8
Genome locationchr3:681169..681748
RNA-Seq ExpressionMoc03g00910
SyntenyMoc03g00910
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022154868.1 uncharacterized protein LOC111022023 [Momordica charantia]3.3e-83100Show/hide
Query:  MNATLNSGVVFSEDIADESDSDANSAEGSDYYEPIAAVDDEESDDAGSEDEIHSSDTHLQHLPNGCRVNQVENAVSSLRLNEDEDEERMRKASDSAIRMA
        MNATLNSGVVFSEDIADESDSDANSAEGSDYYEPIAAVDDEESDDAGSEDEIHSSDTHLQHLPNGCRVNQVENAVSSLRLNEDEDEERMRKASDSAIRMA
Subjt:  MNATLNSGVVFSEDIADESDSDANSAEGSDYYEPIAAVDDEESDDAGSEDEIHSSDTHLQHLPNGCRVNQVENAVSSLRLNEDEDEERMRKASDSAIRMA

Query:  FREDETRRNAPLSPENAMRIMEAMRGVSFGGVAPDWTRIVSEDRWIDQLRRLRQTPSSPNNFGN
        FREDETRRNAPLSPENAMRIMEAMRGVSFGGVAPDWTRIVSEDRWIDQLRRLRQTPSSPNNFGN
Subjt:  FREDETRRNAPLSPENAMRIMEAMRGVSFGGVAPDWTRIVSEDRWIDQLRRLRQTPSSPNNFGN

XP_022964640.1 uncharacterized protein LOC111464656 [Cucurbita moschata]5.6e-6781.4Show/hide
Query:  MNATLNSGVVFSEDIADESDSDANSAEGSDYYEPIAAVDDEESDDAGSEDEIHSSDTHLQHLPNGCRVNQVENAVSSLRLNED--------EDEERMRKA
        MNA+LNSG+VFSEDIAD SDSD NSAEGSDYYEPI+A+D EESD+AGS+DE +SSDTHL HLPNGCR   VENAVSSL LN+D        E+EE MR+A
Subjt:  MNATLNSGVVFSEDIADESDSDANSAEGSDYYEPIAAVDDEESDDAGSEDEIHSSDTHLQHLPNGCRVNQVENAVSSLRLNED--------EDEERMRKA

Query:  SDSAIRMAFREDETRRNAPLSPENAMRIMEAMRGVSFGGVAPDWTRIVSEDRWIDQLRRLRQTPSSPNNFGN
        SDSAIRMAFREDETRRNAPLSPENA RIMEAMRG+SFGG APDWTRIVSEDRWIDQLRRLRQTP+SPNNFGN
Subjt:  SDSAIRMAFREDETRRNAPLSPENAMRIMEAMRGVSFGGVAPDWTRIVSEDRWIDQLRRLRQTPSSPNNFGN

XP_022970483.1 uncharacterized protein LOC111469451 [Cucurbita maxima]3.3e-6781.4Show/hide
Query:  MNATLNSGVVFSEDIADESDSDANSAEGSDYYEPIAAVDDEESDDAGSEDEIHSSDTHLQHLPNGCRVNQVENAVSSLRLNED--------EDEERMRKA
        MNA+LNSG+VFSEDIAD SDSD NSAEGSDYYEPI+A+D EESD+AGS+DE +SSDTHL HLPNGCR   VENAVSSL LN+D        E+EE MR+A
Subjt:  MNATLNSGVVFSEDIADESDSDANSAEGSDYYEPIAAVDDEESDDAGSEDEIHSSDTHLQHLPNGCRVNQVENAVSSLRLNED--------EDEERMRKA

Query:  SDSAIRMAFREDETRRNAPLSPENAMRIMEAMRGVSFGGVAPDWTRIVSEDRWIDQLRRLRQTPSSPNNFGN
        SDSAIRMAFREDETRRNAPLSPENA RIMEAMRG+SFGG APDWTRIVSEDRWIDQLRRLRQTP+SPNNFGN
Subjt:  SDSAIRMAFREDETRRNAPLSPENAMRIMEAMRGVSFGGVAPDWTRIVSEDRWIDQLRRLRQTPSSPNNFGN

XP_023520169.1 uncharacterized protein LOC111783470 [Cucurbita pepo subsp. pepo]4.4e-6479.77Show/hide
Query:  MNATLNSGVVFSEDIADESDSDANSAEGSDYYEPIAAVDDEESDD-AGSEDEIHSSDTHLQHLPNGCRVNQVENAVSSLRLNED--------EDEERMRK
        MNA+LNSG+VFSEDIAD SDSD NSAEGSDYYEPI+ +D EESD+ AGS+DE +SSDTHL HLPNG R   VENAVSSL LN+D        E+EE MR+
Subjt:  MNATLNSGVVFSEDIADESDSDANSAEGSDYYEPIAAVDDEESDD-AGSEDEIHSSDTHLQHLPNGCRVNQVENAVSSLRLNED--------EDEERMRK

Query:  ASDSAIRMAFREDETRRNAPLSPENAMRIMEAMRGVSFGGVAPDWTRIVSEDRWIDQLRRLRQTPSSPNNFGN
        ASDSAIRMAFREDETRRNAPLSPENA RIMEAMRG+SFGG APDWTRIVSEDRWIDQLRRLRQTP+SPNNFGN
Subjt:  ASDSAIRMAFREDETRRNAPLSPENAMRIMEAMRGVSFGGVAPDWTRIVSEDRWIDQLRRLRQTPSSPNNFGN

XP_038894769.1 uncharacterized protein LOC120083197 [Benincasa hispida]1.3e-6379.07Show/hide
Query:  MNATLNSGVVFSEDIADESDSDANSAEGSDYYEPIAAVDDEESDDAGSEDEIHSSDTHLQHLPNGCRVNQVENAVSSLRLN--------EDEDEERMRKA
        MNATLNSG+VFSE+IAD SDSD NSAEGSDYYEPI+A+D EESD+AGSE+E +SSD H  HL NGC    VENAVSSL LN        +DE+EERMR+A
Subjt:  MNATLNSGVVFSEDIADESDSDANSAEGSDYYEPIAAVDDEESDDAGSEDEIHSSDTHLQHLPNGCRVNQVENAVSSLRLN--------EDEDEERMRKA

Query:  SDSAIRMAFREDETRRNAPLSPENAMRIMEAMRGVSFGGVAPDWTRIVSEDRWIDQLRRLRQTPSSPNNFGN
        SDSAIRMAFREDETRRNAPLSPENA RIMEAMRG+SFGG APDWTRIVSEDRWIDQLRRLRQTPS  NNFGN
Subjt:  SDSAIRMAFREDETRRNAPLSPENAMRIMEAMRGVSFGGVAPDWTRIVSEDRWIDQLRRLRQTPSSPNNFGN

TrEMBL top hitse value%identityAlignment
A0A0A0LXQ6 Uncharacterized protein7.2e-6076.16Show/hide
Query:  MNATLNSGVVFSEDIADESDSDANSAEGSDYYEPIAAVDDEESDDAGSEDEIHSSDTHLQHLPNGCRVNQVENAVSSLRLN--------EDEDEERMRKA
        MNATLNSG+VF+EDIAD SDSD NSAEGSDYYEPI+A+D EESD A SEDE +SSD H   LPNGC    VENAVSSL LN        +DE+EERMR A
Subjt:  MNATLNSGVVFSEDIADESDSDANSAEGSDYYEPIAAVDDEESDDAGSEDEIHSSDTHLQHLPNGCRVNQVENAVSSLRLN--------EDEDEERMRKA

Query:  SDSAIRMAFREDETRRNAPLSPENAMRIMEAMRGVSFGGVAPDWTRIVSEDRWIDQLRRLRQTPSSPNNFGN
        SDSAIRMAFREDETRRNAPLSPEN  RIMEAMRG+SF G APDWTRIVSEDRWIDQLRRLRQTP+  N+ GN
Subjt:  SDSAIRMAFREDETRRNAPLSPENAMRIMEAMRGVSFGGVAPDWTRIVSEDRWIDQLRRLRQTPSSPNNFGN

A0A1S3C5C0 uncharacterized protein LOC1034970441.1e-6076.74Show/hide
Query:  MNATLNSGVVFSEDIADESDSDANSAEGSDYYEPIAAVDDEESDDAGSEDEIHSSDTHLQHLPNGCRVNQVENAVSSLRLN--------EDEDEERMRKA
        MNATLNSG+VFSEDI D SDSD NSAEGSDYYEPI+A+D EESD A SEDE +SSDTH   LPNGC    VENAVSSL LN        +DE+EERMR+A
Subjt:  MNATLNSGVVFSEDIADESDSDANSAEGSDYYEPIAAVDDEESDDAGSEDEIHSSDTHLQHLPNGCRVNQVENAVSSLRLN--------EDEDEERMRKA

Query:  SDSAIRMAFREDETRRNAPLSPENAMRIMEAMRGVSFGGVAPDWTRIVSEDRWIDQLRRLRQTPSSPNNFGN
        SDSAIRMAFREDETRRNAPLSPEN  RIMEAMRG+SFGG APDWTRIVSEDRWIDQLRRLRQTP+  N+  N
Subjt:  SDSAIRMAFREDETRRNAPLSPENAMRIMEAMRGVSFGGVAPDWTRIVSEDRWIDQLRRLRQTPSSPNNFGN

A0A6J1DLG7 uncharacterized protein LOC1110220231.6e-83100Show/hide
Query:  MNATLNSGVVFSEDIADESDSDANSAEGSDYYEPIAAVDDEESDDAGSEDEIHSSDTHLQHLPNGCRVNQVENAVSSLRLNEDEDEERMRKASDSAIRMA
        MNATLNSGVVFSEDIADESDSDANSAEGSDYYEPIAAVDDEESDDAGSEDEIHSSDTHLQHLPNGCRVNQVENAVSSLRLNEDEDEERMRKASDSAIRMA
Subjt:  MNATLNSGVVFSEDIADESDSDANSAEGSDYYEPIAAVDDEESDDAGSEDEIHSSDTHLQHLPNGCRVNQVENAVSSLRLNEDEDEERMRKASDSAIRMA

Query:  FREDETRRNAPLSPENAMRIMEAMRGVSFGGVAPDWTRIVSEDRWIDQLRRLRQTPSSPNNFGN
        FREDETRRNAPLSPENAMRIMEAMRGVSFGGVAPDWTRIVSEDRWIDQLRRLRQTPSSPNNFGN
Subjt:  FREDETRRNAPLSPENAMRIMEAMRGVSFGGVAPDWTRIVSEDRWIDQLRRLRQTPSSPNNFGN

A0A6J1HLE1 uncharacterized protein LOC1114646562.7e-6781.4Show/hide
Query:  MNATLNSGVVFSEDIADESDSDANSAEGSDYYEPIAAVDDEESDDAGSEDEIHSSDTHLQHLPNGCRVNQVENAVSSLRLNED--------EDEERMRKA
        MNA+LNSG+VFSEDIAD SDSD NSAEGSDYYEPI+A+D EESD+AGS+DE +SSDTHL HLPNGCR   VENAVSSL LN+D        E+EE MR+A
Subjt:  MNATLNSGVVFSEDIADESDSDANSAEGSDYYEPIAAVDDEESDDAGSEDEIHSSDTHLQHLPNGCRVNQVENAVSSLRLNED--------EDEERMRKA

Query:  SDSAIRMAFREDETRRNAPLSPENAMRIMEAMRGVSFGGVAPDWTRIVSEDRWIDQLRRLRQTPSSPNNFGN
        SDSAIRMAFREDETRRNAPLSPENA RIMEAMRG+SFGG APDWTRIVSEDRWIDQLRRLRQTP+SPNNFGN
Subjt:  SDSAIRMAFREDETRRNAPLSPENAMRIMEAMRGVSFGGVAPDWTRIVSEDRWIDQLRRLRQTPSSPNNFGN

A0A6J1I3Z1 uncharacterized protein LOC1114694511.6e-6781.4Show/hide
Query:  MNATLNSGVVFSEDIADESDSDANSAEGSDYYEPIAAVDDEESDDAGSEDEIHSSDTHLQHLPNGCRVNQVENAVSSLRLNED--------EDEERMRKA
        MNA+LNSG+VFSEDIAD SDSD NSAEGSDYYEPI+A+D EESD+AGS+DE +SSDTHL HLPNGCR   VENAVSSL LN+D        E+EE MR+A
Subjt:  MNATLNSGVVFSEDIADESDSDANSAEGSDYYEPIAAVDDEESDDAGSEDEIHSSDTHLQHLPNGCRVNQVENAVSSLRLNED--------EDEERMRKA

Query:  SDSAIRMAFREDETRRNAPLSPENAMRIMEAMRGVSFGGVAPDWTRIVSEDRWIDQLRRLRQTPSSPNNFGN
        SDSAIRMAFREDETRRNAPLSPENA RIMEAMRG+SFGG APDWTRIVSEDRWIDQLRRLRQTP+SPNNFGN
Subjt:  SDSAIRMAFREDETRRNAPLSPENAMRIMEAMRGVSFGGVAPDWTRIVSEDRWIDQLRRLRQTPSSPNNFGN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G07020.1 unknown protein1.1e-2552.08Show/hide
Query:  SDSDANSAEGS-DYYEPIAAVDDEESDDAGSEDEIHSSDTHL----QHLPNG-CRVNQVENAVSSLRLNEDED-EERMRKASDSAIRMAFREDETRRNAP
        SDSD+NS E S DYYEPI+AVD   S+D    DE    D++L      L NG C +   E  +SS+ +N++ D EE     +   IR AF EDE RR +P
Subjt:  SDSDANSAEGS-DYYEPIAAVDDEESDDAGSEDEIHSSDTHL----QHLPNG-CRVNQVENAVSSLRLNEDED-EERMRKASDSAIRMAFREDETRRNAP

Query:  LSPENAMRIMEAMRGVSFGGVAPDWTRIVSEDRWIDQLRRLRQT
        L  ENA+R+MEAMR +SF G APDW   V+EDRWIDQLRRLR T
Subjt:  LSPENAMRIMEAMRGVSFGGVAPDWTRIVSEDRWIDQLRRLRQT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGCAACGTTGAATTCTGGAGTTGTTTTCTCTGAAGACATTGCCGATGAAAGTGATTCCGATGCGAATTCCGCTGAAGGATCGGATTACTACGAGCCAATCGCGGC
CGTTGATGATGAAGAATCCGATGACGCTGGATCAGAGGACGAAATTCACAGCTCCGATACTCATTTGCAGCATTTACCCAACGGTTGTCGTGTGAATCAAGTGGAGAACG
CAGTTTCGTCTCTTAGGCTGAACGAGGATGAGGATGAGGAGAGGATGAGGAAGGCTTCTGATTCGGCGATAAGGATGGCGTTTAGAGAGGATGAGACTCGGAGGAACGCG
CCGCTGTCACCGGAGAATGCGATGAGGATCATGGAGGCCATGCGCGGCGTCTCGTTTGGCGGCGTTGCTCCAGATTGGACTCGGATTGTTTCTGAGGACCGTTGGATTGA
TCAGCTTCGAAGGCTTAGGCAAACGCCCAGCTCTCCCAATAATTTCGGAAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATGCAACGTTGAATTCTGGAGTTGTTTTCTCTGAAGACATTGCCGATGAAAGTGATTCCGATGCGAATTCCGCTGAAGGATCGGATTACTACGAGCCAATCGCGGC
CGTTGATGATGAAGAATCCGATGACGCTGGATCAGAGGACGAAATTCACAGCTCCGATACTCATTTGCAGCATTTACCCAACGGTTGTCGTGTGAATCAAGTGGAGAACG
CAGTTTCGTCTCTTAGGCTGAACGAGGATGAGGATGAGGAGAGGATGAGGAAGGCTTCTGATTCGGCGATAAGGATGGCGTTTAGAGAGGATGAGACTCGGAGGAACGCG
CCGCTGTCACCGGAGAATGCGATGAGGATCATGGAGGCCATGCGCGGCGTCTCGTTTGGCGGCGTTGCTCCAGATTGGACTCGGATTGTTTCTGAGGACCGTTGGATTGA
TCAGCTTCGAAGGCTTAGGCAAACGCCCAGCTCTCCCAATAATTTCGGAAACTGA
Protein sequenceShow/hide protein sequence
MNATLNSGVVFSEDIADESDSDANSAEGSDYYEPIAAVDDEESDDAGSEDEIHSSDTHLQHLPNGCRVNQVENAVSSLRLNEDEDEERMRKASDSAIRMAFREDETRRNA
PLSPENAMRIMEAMRGVSFGGVAPDWTRIVSEDRWIDQLRRLRQTPSSPNNFGN