CuGenDBv2

Gene ID	Moc03g01170
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	CCHC-type domain-containing protein
Genome location	chr3:848738..849343
RNA-Seq Expression	Moc03g01170
Synteny	Moc03g01170
Gene Ontology terms	GO:0016020 - membrane (cellular component) GO:0000166 - nucleotide binding (molecular function) GO:0016787 - hydrolase activity (molecular function) GO:0043167 - ion binding (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

BBG97541.1 disease resistance family protein / LRR family protein [Prunus dulcis]

9.7e-37

47.22

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Query:  EVLKFNGKNFSFWKMQVKDLLTCKKIHKTLGE-RPAGMVDKDWNEMDEQAVANIRMTLSMNVCSLMAKETTTKDLLKALQDTYEKPSANTKKLLWTRYFN
        ++ KF+G +F FWKMQ++D L  KK+++ L E +P GM D+DW  +D QA+  IR+TLS NV   +AKE TT  L+ AL   YEKPSA+ K  L  R FN
Subjt:  EVLKFNGKNFSFWKMQVKDLLTCKKIHKTLGE-RPAGMVDKDWNEMDEQAVANIRMTLSMNVCSLMAKETTTKDLLKALQDTYEKPSANTKKLLWTRYFN

Query:  IHMEEGTLVNSHINELTEILNRLEGMGVKIDKEVKAMRLLTSLPDSWETMKTAVSNSLGKNSLKFTAIYDAAISEETWRK
        + M EG  V  H+NEL  +  +L  +G++ D+EV+A+ LL+SLP+SW    TAVS+S G N L F  + D  +SEE  R+
Subjt:  IHMEEGTLVNSHINELTEILNRLEGMGVKIDKEVKAMRLLTSLPDSWETMKTAVSNSLGKNSLKFTAIYDAAISEETWRK

BBH05460.1 hypothetical protein Prudu_016848 [Prunus dulcis]

9.7e-37

47.22

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Query:  EVLKFNGKNFSFWKMQVKDLLTCKKIHKTLGE-RPAGMVDKDWNEMDEQAVANIRMTLSMNVCSLMAKETTTKDLLKALQDTYEKPSANTKKLLWTRYFN
        ++ KF+G +F FWKMQ++D L  KK+++ L E +P GM D+DW  +D QA+  IR+TLS NV   +AKE TT  L+ AL   YEKPSA+ K  L  R FN
Subjt:  EVLKFNGKNFSFWKMQVKDLLTCKKIHKTLGE-RPAGMVDKDWNEMDEQAVANIRMTLSMNVCSLMAKETTTKDLLKALQDTYEKPSANTKKLLWTRYFN

Query:  IHMEEGTLVNSHINELTEILNRLEGMGVKIDKEVKAMRLLTSLPDSWETMKTAVSNSLGKNSLKFTAIYDAAISEETWRK
        + M EG  V  H+NEL  +  +L  +G++ D+EV+A+ LL+SLP+SW    TAVS+S G N L F  + D  +SEE  R+
Subjt:  IHMEEGTLVNSHINELTEILNRLEGMGVKIDKEVKAMRLLTSLPDSWETMKTAVSNSLGKNSLKFTAIYDAAISEETWRK

KAG7561662.1 Zinc finger CCHC-type superfamily [Arabidopsis thaliana x Arabidopsis arenosa]

1.5e-37

46.29

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Query:  KFNGKNFSFWKMQVKDLLTCKKIHKTLGERPAGMVDKDWNEMDEQAVANIRMTLSMNVCSLMAKETTTKDLLKALQDTYEKPSANTKKLLWTRYFNIHME
        KF+G +F+FW+MQ++D L  KK+H+ L  +P  M  ++W+ +D Q +  IR+TLS NV   +AKE TT+ L+K L D YEKPSAN K  L  + F++ ME
Subjt:  KFNGKNFSFWKMQVKDLLTCKKIHKTLGERPAGMVDKDWNEMDEQAVANIRMTLSMNVCSLMAKETTTKDLLKALQDTYEKPSANTKKLLWTRYFNIHME

Query:  EGTLVNSHINELTEILNRLEGMGVKIDKEVKAMRLLTSLPDSWETMKTAVSNSLGKNSLKFTAIYDAAISEETWR
        EG  V +H+NE   I+N+L  + ++ D EV+A+ L+ SLP+SWE M+ AVSNS+G   LKF  + D  + EE  R
Subjt:  EGTLVNSHINELTEILNRLEGMGVKIDKEVKAMRLLTSLPDSWETMKTAVSNSLGKNSLKFTAIYDAAISEETWR

KAG7584790.1 Zinc finger CCHC-type superfamily [Arabidopsis thaliana x Arabidopsis arenosa]

8.7e-38

46.86

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Query:  KFNGKNFSFWKMQVKDLLTCKKIHKTLGERPAGMVDKDWNEMDEQAVANIRMTLSMNVCSLMAKETTTKDLLKALQDTYEKPSANTKKLLWTRYFNIHME
        KF+G +F+FW+MQ++D L  KK+H+ L  +P  M  ++W+ +D Q +  IR+TLS NV   +AKE TT+ L+K L D YEKPSAN K  L  + F++ ME
Subjt:  KFNGKNFSFWKMQVKDLLTCKKIHKTLGERPAGMVDKDWNEMDEQAVANIRMTLSMNVCSLMAKETTTKDLLKALQDTYEKPSANTKKLLWTRYFNIHME

Query:  EGTLVNSHINELTEILNRLEGMGVKIDKEVKAMRLLTSLPDSWETMKTAVSNSLGKNSLKFTAIYDAAISEETWR
        EG  V +H+NE   I+N+L  + ++ D EV+A+ LL SLP+SWE M+ AVSNS+G   LKF  + D  + EE  R
Subjt:  EGTLVNSHINELTEILNRLEGMGVKIDKEVKAMRLLTSLPDSWETMKTAVSNSLGKNSLKFTAIYDAAISEETWR

KAG7593230.1 Pentatricopeptide repeat [Arabidopsis thaliana x Arabidopsis arenosa]

8.7e-38

46.86

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Query:  KFNGKNFSFWKMQVKDLLTCKKIHKTLGERPAGMVDKDWNEMDEQAVANIRMTLSMNVCSLMAKETTTKDLLKALQDTYEKPSANTKKLLWTRYFNIHME
        KF+G +F+FW+MQ++D L  KK+H+ L  +P  M  ++W+ +D Q +  IR+TLS NV   +AKE TT+ L+K L D YEKPSAN K  L  + F++ ME
Subjt:  KFNGKNFSFWKMQVKDLLTCKKIHKTLGERPAGMVDKDWNEMDEQAVANIRMTLSMNVCSLMAKETTTKDLLKALQDTYEKPSANTKKLLWTRYFNIHME

Query:  EGTLVNSHINELTEILNRLEGMGVKIDKEVKAMRLLTSLPDSWETMKTAVSNSLGKNSLKFTAIYDAAISEETWR
        EG  V +H+NE   I+N+L  + ++ D EV+A+ LL SLP+SWE M+ AVSNS+G   LKF  + D  + EE  R
Subjt:  EGTLVNSHINELTEILNRLEGMGVKIDKEVKAMRLLTSLPDSWETMKTAVSNSLGKNSLKFTAIYDAAISEETWR

TrEMBL top hits

e value

%identity

Alignment

A0A0D3AEM1 CCHC-type domain-containing protein

5.5e-38

46.29

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Query:  KFNGKNFSFWKMQVKDLLTCKKIHKTLGERPAGMVDKDWNEMDEQAVANIRMTLSMNVCSLMAKETTTKDLLKALQDTYEKPSANTKKLLWTRYFNIHME
        KF+G +++FW+MQ++D L  KK+H+ L ++P  M   +W  +D Q +  IR+TLS NV   + KE TT+ L+K L D YEKPSAN+K  L  + F++ ME
Subjt:  KFNGKNFSFWKMQVKDLLTCKKIHKTLGERPAGMVDKDWNEMDEQAVANIRMTLSMNVCSLMAKETTTKDLLKALQDTYEKPSANTKKLLWTRYFNIHME

Query:  EGTLVNSHINELTEILNRLEGMGVKIDKEVKAMRLLTSLPDSWETMKTAVSNSLGKNSLKFTAIYDAAISEETWR
        EG LV +HINE   I+N+L  + ++ + EV+A+ LL SLP+SWE+M+ AVSNS+G   LKF  + D  ++EE  R
Subjt:  EGTLVNSHINELTEILNRLEGMGVKIDKEVKAMRLLTSLPDSWETMKTAVSNSLGKNSLKFTAIYDAAISEETWR

A0A0D3CS45 Uncharacterized protein

5.5e-38

46.86

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Query:  KFNGKNFSFWKMQVKDLLTCKKIHKTLGERPAGMVDKDWNEMDEQAVANIRMTLSMNVCSLMAKETTTKDLLKALQDTYEKPSANTKKLLWTRYFNIHME
        KF+G NF+FW+MQ++D L  KK+H+ L ++P  M   +W  +D Q +  IR+TLS NV   +AKE  T+ L+K L D YEKPSAN K  L  + F++ ME
Subjt:  KFNGKNFSFWKMQVKDLLTCKKIHKTLGERPAGMVDKDWNEMDEQAVANIRMTLSMNVCSLMAKETTTKDLLKALQDTYEKPSANTKKLLWTRYFNIHME

Query:  EGTLVNSHINELTEILNRLEGMGVKIDKEVKAMRLLTSLPDSWETMKTAVSNSLGKNSLKFTAIYDAAISEETWR
        EG LV +H+NE   I+N+L  + ++ + EV+A+ LL SLP+SWE M+ AVSNS+G   LKF  + D  ++EE  R
Subjt:  EGTLVNSHINELTEILNRLEGMGVKIDKEVKAMRLLTSLPDSWETMKTAVSNSLGKNSLKFTAIYDAAISEETWR

A0A0D3DMW7 CCHC-type domain-containing protein

2.7e-37

45.71

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Query:  KFNGKNFSFWKMQVKDLLTCKKIHKTLGERPAGMVDKDWNEMDEQAVANIRMTLSMNVCSLMAKETTTKDLLKALQDTYEKPSANTKKLLWTRYFNIHME
        KF+G +++FW+MQ++D L  KK+H+ L ++P  M   +W  +D Q +  IR+TLS NV   +AKE TT+ L+K L D YEKPS N K  L  + F++ ME
Subjt:  KFNGKNFSFWKMQVKDLLTCKKIHKTLGERPAGMVDKDWNEMDEQAVANIRMTLSMNVCSLMAKETTTKDLLKALQDTYEKPSANTKKLLWTRYFNIHME

Query:  EGTLVNSHINELTEILNRLEGMGVKIDKEVKAMRLLTSLPDSWETMKTAVSNSLGKNSLKFTAIYDAAISEETWR
        EG LV +H+NE   I+N+L  + ++ D EV+A+ LL SLP+SWE M+ AV+NS+G   LKF  + D  ++EE  R
Subjt:  EGTLVNSHINELTEILNRLEGMGVKIDKEVKAMRLLTSLPDSWETMKTAVSNSLGKNSLKFTAIYDAAISEETWR

A0A3P6FTI2 Abhydrolase_3 domain-containing protein

4.7e-37

45.14

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Query:  KFNGKNFSFWKMQVKDLLTCKKIHKTLGERPAGMVDKDWNEMDEQAVANIRMTLSMNVCSLMAKETTTKDLLKALQDTYEKPSANTKKLLWTRYFNIHME
        KF+G +++FW+MQ++D L  KK+H+ L ++P  +   +W  +D Q +  IR+TLS NV   +AKE TT+ L+K L D YEKPSAN K  L  + F++ ME
Subjt:  KFNGKNFSFWKMQVKDLLTCKKIHKTLGERPAGMVDKDWNEMDEQAVANIRMTLSMNVCSLMAKETTTKDLLKALQDTYEKPSANTKKLLWTRYFNIHME

Query:  EGTLVNSHINELTEILNRLEGMGVKIDKEVKAMRLLTSLPDSWETMKTAVSNSLGKNSLKFTAIYDAAISEETWR
        EG LV +H+NE   I+N+L  + ++ + EV+A+ LL SLP+SWE M+ AVSN +G   LKF  + D  ++EE  R
Subjt:  EGTLVNSHINELTEILNRLEGMGVKIDKEVKAMRLLTSLPDSWETMKTAVSNSLGKNSLKFTAIYDAAISEETWR

A0A4Y1RCM7 CCHC-type domain-containing protein

4.7e-37

47.22

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Query:  EVLKFNGKNFSFWKMQVKDLLTCKKIHKTLGE-RPAGMVDKDWNEMDEQAVANIRMTLSMNVCSLMAKETTTKDLLKALQDTYEKPSANTKKLLWTRYFN
        ++ KF+G +F FWKMQ++D L  KK+++ L E +P GM D+DW  +D QA+  IR+TLS NV   +AKE TT  L+ AL   YEKPSA+ K  L  R FN
Subjt:  EVLKFNGKNFSFWKMQVKDLLTCKKIHKTLGE-RPAGMVDKDWNEMDEQAVANIRMTLSMNVCSLMAKETTTKDLLKALQDTYEKPSANTKKLLWTRYFN

Query:  IHMEEGTLVNSHINELTEILNRLEGMGVKIDKEVKAMRLLTSLPDSWETMKTAVSNSLGKNSLKFTAIYDAAISEETWRK
        + M EG  V  H+NEL  +  +L  +G++ D+EV+A+ LL+SLP+SW    TAVS+S G N L F  + D  +SEE  R+
Subjt:  IHMEEGTLVNSHINELTEILNRLEGMGVKIDKEVKAMRLLTSLPDSWETMKTAVSNSLGKNSLKFTAIYDAAISEETWRK

SwissProt top hits

e value

%identity

Alignment

P04146 Copia protein

4.0e-09

22.81

Show/hide

Query:  FNGKNFSFWKMQVKDLLTCKKIHKTLGERPAGMVDKDWNEMDEQAVANIRMTLSMNVCSLMAKETTTKDLLKALQDTYEKPSANTKKLLWTRYFNIHMEE
        F+G+ ++ WK +++ LL  + + K +       VD  W + +  A + I   LS +  +    + T + +L+ L   YE+ S  ++  L  R  ++ +  
Subjt:  FNGKNFSFWKMQVKDLLTCKKIHKTLGERPAGMVDKDWNEMDEQAVANIRMTLSMNVCSLMAKETTTKDLLKALQDTYEKPSANTKKLLWTRYFNIHMEE

Query:  GTLVNSHINELTEILNRLEGMGVKIDKEVKAMRLLTSLPDSWETMKTAVSNSLGKNSLKFTAIYDAAISEE
           + SH +   E+++ L   G KI++  K   LL +LP  ++ + TA+  +L + +L    + +  + +E
Subjt:  GTLVNSHINELTEILNRLEGMGVKIDKEVKAMRLLTSLPDSWETMKTAVSNSLGKNSLKFTAIYDAAISEE

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94

1.4e-22

34.43

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Query:  EVLKFNGKN-FSFWKMQVKDLLTCKKIHKTL---GERPAGMVDKDWNEMDEQAVANIRMTLSMNVCSLMAKETTTKDLLKALQDTYEKPSANTKKLLWTR
        EV KFNG N FS W+ +++DLL  + +HK L    ++P  M  +DW ++DE+A + IR+ LS +V + +  E T + +   L+  Y   +   K  L  +
Subjt:  EVLKFNGKN-FSFWKMQVKDLLTCKKIHKTL---GERPAGMVDKDWNEMDEQAVANIRMTLSMNVCSLMAKETTTKDLLKALQDTYEKPSANTKKLLWTR

Query:  YFNIHMEEGTLVNSHINELTEILNRLEGMGVKIDKEVKAMRLLTSLPDSWETMKTAVSNSLGKNSLKFTAIYDAAISEETWRK
         + +HM EGT   SH+N    ++ +L  +GVKI++E KA+ LL SLP S++ + T + +  GK +++   +  A +  E  RK
Subjt:  YFNIHMEEGTLVNSHINELTEILNRLEGMGVKIDKEVKAMRLLTSLPDSWETMKTAVSNSLGKNSLKFTAIYDAAISEETWRK

Arabidopsis top hits

e value

%identity

Alignment

AT3G29785.1 unknown protein

1.4e-12

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Query:  KFNGKNFSFWKMQVKDLLTCKKIHKTLGERPAGMVDKDWNEMDEQAVANIRMTLSMNVCSLMAKETTTKDLLKALQDTYEKPSAN
        K +G ++SF +M+++D L  KK+H+ LG++   M   DWN +  Q +  IR+T+S N+   +AKE +   L+K L D Y+KPS N
Subjt:  KFNGKNFSFWKMQVKDLLTCKKIHKTLGERPAGMVDKDWNEMDEQAVANIRMTLSMNVCSLMAKETTTKDLLKALQDTYEKPSAN

Sequences

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CDS sequence

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ATGGGAGACAAATATCACGCACACCATTACTATGAAGAGGTCCTGAAGTTCAATGGGAAGAATTTCAGTTTTTGGAAGATGCAGGTAAAGGATCTTCTTACATGCAAGAA
GATACACAAGACTTTAGGGGAGAGACCAGCAGGGATGGTAGACAAGGATTGGAATGAGATGGATGAGCAGGCCGTTGCGAACATCAGAATGACGTTATCAATGAATGTTT
GTAGTCTGATGGCAAAAGAGACTACAACAAAAGATTTGTTGAAGGCCTTGCAAGATACGTATGAAAAACCTTCTGCCAATACAAAAAAACTTCTATGGACGAGGTATTTT
AATATCCATATGGAGGAGGGAACCTTGGTGAATTCCCACATTAATGAACTCACTGAAATCTTGAATAGGTTAGAAGGGATGGGTGTCAAGATTGACAAGGAGGTGAAAGC
TATGAGGCTGTTGACGTCTTTGCCTGACAGTTGGGAGACGATGAAGACCGCGGTGTCGAATTCGCTAGGGAAAAATAGCTTGAAATTTACAGCTATTTATGATGCCGCCA
TATCTGAGGAAACCTGGAGAAAATTAGGAAAATGTCTGCATCTACTTCAAGGGTAG

mRNA sequence

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Protein sequence

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MGDKYHAHHYYEEVLKFNGKNFSFWKMQVKDLLTCKKIHKTLGERPAGMVDKDWNEMDEQAVANIRMTLSMNVCSLMAKETTTKDLLKALQDTYEKPSANTKKLLWTRYF
NIHMEEGTLVNSHINELTEILNRLEGMGVKIDKEVKAMRLLTSLPDSWETMKTAVSNSLGKNSLKFTAIYDAAISEETWRKLGKCLHLLQG

Moc03g01170 (gene) of Bitter gourd (OHB3-1) v2 genome