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Moc03g01330 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g01330
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr3:1022711..1023503
RNA-Seq ExpressionMoc03g01330
SyntenyMoc03g01330
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022147761.1 uncharacterized protein LOC111016619 [Momordica charantia]8.4e-4073.15Show/hide
Query:  MGEKVPPKFKLPSLKQFDGTTGLVDHLDAYREWMDIYRVSEAIQCRVFSFALDGSVRVWFRQLKRGSISSFKSLARAFVTQFVGGWNQSRPVAYLLTIKQ
        M EKVPPKFKLP++K++DG+T  +DHLD Y EW DIY ++EAI+CRVFSF L GS R+WF+QLKR SISSFK LARAFVTQF GGWN+SRPVAYLLTIKQ
Subjt:  MGEKVPPKFKLPSLKQFDGTTGLVDHLDAYREWMDIYRVSEAIQCRVFSFALDGSVRVWFRQLKRGSISSFKSLARAFVTQFVGGWNQSRPVAYLLTIKQ

Query:  RTAESLHD
        +  ESL D
Subjt:  RTAESLHD

XP_022150035.1 uncharacterized protein LOC111018307 [Momordica charantia]1.5e-4481.98Show/hide
Query:  EEIMGEKVPPKFKLPSLKQFDGTTGLVDHLDAYREWMDIYRVSEAIQCRVFSFALDGSVRVWFRQLKRGSISSFKSLARAFVTQFVGGWNQSRPVAYLLT
        EEIM  KVPPKFKLP++KQFDGT  LVDHLDAYREWMDIY VSEA++CRVFS  L GS RVWFRQLKRGSISSFKSLA+AFVTQF+GG ++SRPVAYLLT
Subjt:  EEIMGEKVPPKFKLPSLKQFDGTTGLVDHLDAYREWMDIYRVSEAIQCRVFSFALDGSVRVWFRQLKRGSISSFKSLARAFVTQFVGGWNQSRPVAYLLT

Query:  IKQRTAESLHD
        IKQR  ESLHD
Subjt:  IKQRTAESLHD

XP_022158344.1 uncharacterized protein LOC111024851 [Momordica charantia]6.9e-3467.59Show/hide
Query:  MGEKVPPKFKLPSLKQFDGTTGLVDHLDAYREWMDIYRVSEAIQCRVFSFALDGSVRVWFRQLKRGSISSFKSLARAFVTQFVGGWNQSRPVAYLLTIKQ
        M EK  PKFKLP++ ++DG+   +DHLDAYREW DIY + EAI+CRVFSF L GS R WFRQLKR SISSFK LA AFVTQFVGG  +S+PV YLLTIKQ
Subjt:  MGEKVPPKFKLPSLKQFDGTTGLVDHLDAYREWMDIYRVSEAIQCRVFSFALDGSVRVWFRQLKRGSISSFKSLARAFVTQFVGGWNQSRPVAYLLTIKQ

Query:  RTAESLHD
        +  ESL +
Subjt:  RTAESLHD

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]1.6e-5960.09Show/hide
Query:  LKQREASLPPLVRDPRKGKGSALSEADES--------------RMLTR-DDPSLQHLLRAKMSRIPEEISGKG----------TLTKKSLESGPELSKKQ
        L+ +E+   PLVRDP+KGKG   S+ +ES              R  TR  DP        K  + P    GK           +L K      PE S+K+
Subjt:  LKQREASLPPLVRDPRKGKGSALSEADES--------------RMLTR-DDPSLQHLLRAKMSRIPEEISGKG----------TLTKKSLESGPELSKKQ

Query:  VSLKEKGFDLEELIDQADSSFTEEIMGEKVPPKFKLPSLKQFDGTTGLVDHLDAYREWMDIYRVSEAIQCRVFSFALDGSVRVWFRQLKRGSISSFKSLA
         S KEKGFDLEEL+DQADS FTEEIM EKVPPKFKLP++KQFD TT  VDHLDAYREWMDIY VSEA++CRVFS  L+GS R+WFRQLKRGSISSFKSLA
Subjt:  VSLKEKGFDLEELIDQADSSFTEEIMGEKVPPKFKLPSLKQFDGTTGLVDHLDAYREWMDIYRVSEAIQCRVFSFALDGSVRVWFRQLKRGSISSFKSLA

Query:  RAFVTQFVGGWNQSRPVAYLLTIKQRTAESLHD
        RAFVTQFVGG  +SRPVAYLLTIKQRT ESL D
Subjt:  RAFVTQFVGGWNQSRPVAYLLTIKQRTAESLHD

XP_022159109.1 uncharacterized protein LOC111025548 [Momordica charantia]7.1e-5580Show/hide
Query:  PELSKKQVSLKEKGFDLEELIDQADSSFTEEIMGEKVPPKFKLPSLKQFDGTTGLVDHLDAYREWMDIYRVSEAIQCRVFSFALDGSVRVWFRQLKRGSI
        PE S+K+ + KEKGFDLEEL+ QADS FTEEIM EKVPPKFKLP++K FDG T  VDHLDAYREWMDIY VS+AI+CRVFS  L+GS R+WFRQLKRGSI
Subjt:  PELSKKQVSLKEKGFDLEELIDQADSSFTEEIMGEKVPPKFKLPSLKQFDGTTGLVDHLDAYREWMDIYRVSEAIQCRVFSFALDGSVRVWFRQLKRGSI

Query:  SSFKSLARAFVTQFVGGWNQSRPVAYLLTIKQRTAESLHD
        SSFKSLARAF+TQFVGG  +SRPVAYLLTIKQRTAESLHD
Subjt:  SSFKSLARAFVTQFVGGWNQSRPVAYLLTIKQRTAESLHD

TrEMBL top hitse value%identityAlignment
A0A6J1D3B7 uncharacterized protein LOC1110166194.1e-4073.15Show/hide
Query:  MGEKVPPKFKLPSLKQFDGTTGLVDHLDAYREWMDIYRVSEAIQCRVFSFALDGSVRVWFRQLKRGSISSFKSLARAFVTQFVGGWNQSRPVAYLLTIKQ
        M EKVPPKFKLP++K++DG+T  +DHLD Y EW DIY ++EAI+CRVFSF L GS R+WF+QLKR SISSFK LARAFVTQF GGWN+SRPVAYLLTIKQ
Subjt:  MGEKVPPKFKLPSLKQFDGTTGLVDHLDAYREWMDIYRVSEAIQCRVFSFALDGSVRVWFRQLKRGSISSFKSLARAFVTQFVGGWNQSRPVAYLLTIKQ

Query:  RTAESLHD
        +  ESL D
Subjt:  RTAESLHD

A0A6J1D7D2 uncharacterized protein LOC1110183077.2e-4581.98Show/hide
Query:  EEIMGEKVPPKFKLPSLKQFDGTTGLVDHLDAYREWMDIYRVSEAIQCRVFSFALDGSVRVWFRQLKRGSISSFKSLARAFVTQFVGGWNQSRPVAYLLT
        EEIM  KVPPKFKLP++KQFDGT  LVDHLDAYREWMDIY VSEA++CRVFS  L GS RVWFRQLKRGSISSFKSLA+AFVTQF+GG ++SRPVAYLLT
Subjt:  EEIMGEKVPPKFKLPSLKQFDGTTGLVDHLDAYREWMDIYRVSEAIQCRVFSFALDGSVRVWFRQLKRGSISSFKSLARAFVTQFVGGWNQSRPVAYLLT

Query:  IKQRTAESLHD
        IKQR  ESLHD
Subjt:  IKQRTAESLHD

A0A6J1DWY0 uncharacterized protein LOC1110252937.9e-6060.09Show/hide
Query:  LKQREASLPPLVRDPRKGKGSALSEADES--------------RMLTR-DDPSLQHLLRAKMSRIPEEISGKG----------TLTKKSLESGPELSKKQ
        L+ +E+   PLVRDP+KGKG   S+ +ES              R  TR  DP        K  + P    GK           +L K      PE S+K+
Subjt:  LKQREASLPPLVRDPRKGKGSALSEADES--------------RMLTR-DDPSLQHLLRAKMSRIPEEISGKG----------TLTKKSLESGPELSKKQ

Query:  VSLKEKGFDLEELIDQADSSFTEEIMGEKVPPKFKLPSLKQFDGTTGLVDHLDAYREWMDIYRVSEAIQCRVFSFALDGSVRVWFRQLKRGSISSFKSLA
         S KEKGFDLEEL+DQADS FTEEIM EKVPPKFKLP++KQFD TT  VDHLDAYREWMDIY VSEA++CRVFS  L+GS R+WFRQLKRGSISSFKSLA
Subjt:  VSLKEKGFDLEELIDQADSSFTEEIMGEKVPPKFKLPSLKQFDGTTGLVDHLDAYREWMDIYRVSEAIQCRVFSFALDGSVRVWFRQLKRGSISSFKSLA

Query:  RAFVTQFVGGWNQSRPVAYLLTIKQRTAESLHD
        RAFVTQFVGG  +SRPVAYLLTIKQRT ESL D
Subjt:  RAFVTQFVGGWNQSRPVAYLLTIKQRTAESLHD

A0A6J1DZ49 uncharacterized protein LOC1110248513.4e-3467.59Show/hide
Query:  MGEKVPPKFKLPSLKQFDGTTGLVDHLDAYREWMDIYRVSEAIQCRVFSFALDGSVRVWFRQLKRGSISSFKSLARAFVTQFVGGWNQSRPVAYLLTIKQ
        M EK  PKFKLP++ ++DG+   +DHLDAYREW DIY + EAI+CRVFSF L GS R WFRQLKR SISSFK LA AFVTQFVGG  +S+PV YLLTIKQ
Subjt:  MGEKVPPKFKLPSLKQFDGTTGLVDHLDAYREWMDIYRVSEAIQCRVFSFALDGSVRVWFRQLKRGSISSFKSLARAFVTQFVGGWNQSRPVAYLLTIKQ

Query:  RTAESLHD
        +  ESL +
Subjt:  RTAESLHD

A0A6J1E1E7 uncharacterized protein LOC1110255483.4e-5580Show/hide
Query:  PELSKKQVSLKEKGFDLEELIDQADSSFTEEIMGEKVPPKFKLPSLKQFDGTTGLVDHLDAYREWMDIYRVSEAIQCRVFSFALDGSVRVWFRQLKRGSI
        PE S+K+ + KEKGFDLEEL+ QADS FTEEIM EKVPPKFKLP++K FDG T  VDHLDAYREWMDIY VS+AI+CRVFS  L+GS R+WFRQLKRGSI
Subjt:  PELSKKQVSLKEKGFDLEELIDQADSSFTEEIMGEKVPPKFKLPSLKQFDGTTGLVDHLDAYREWMDIYRVSEAIQCRVFSFALDGSVRVWFRQLKRGSI

Query:  SSFKSLARAFVTQFVGGWNQSRPVAYLLTIKQRTAESLHD
        SSFKSLARAF+TQFVGG  +SRPVAYLLTIKQRTAESLHD
Subjt:  SSFKSLARAFVTQFVGGWNQSRPVAYLLTIKQRTAESLHD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGGTGCAGTCCGAAAACCGATTTGTTGTTCTAGAGGAGAAGGTCAAAGGGATGTACCAGCGCATGACCCAACTGCTTCAACAATTGAAACAGAGGGAAGCAAGTCT
ACCGCCACTTGTCAGAGACCCCCGAAAGGGAAAGGGCTCGGCTCTGAGTGAGGCAGATGAGTCCCGAATGCTGACAAGGGACGACCCAAGTCTCCAACACCTGCTGAGGG
CAAAGATGAGCCGAATACCTGAGGAGATCTCGGGCAAGGGGACTTTGACAAAGAAAAGCTTGGAGAGCGGGCCCGAGTTATCCAAGAAGCAAGTAAGCTTGAAAGAGAAA
GGCTTCGACCTGGAAGAACTAATAGATCAAGCAGATTCCTCGTTCACGGAGGAGATAATGGGGGAGAAAGTCCCTCCGAAATTCAAGCTACCATCTCTAAAGCAGTTCGA
CGGAACGACTGGCCTGGTTGATCATCTTGATGCTTACCGAGAATGGATGGACATCTACAGGGTCTCAGAGGCAATCCAATGCCGCGTTTTCTCTTTCGCCCTAGATGGAT
CAGTTAGGGTTTGGTTCCGACAACTAAAGCGAGGGTCGATTTCAAGCTTCAAAAGCTTGGCCAGGGCATTTGTAACCCAGTTTGTAGGAGGTTGGAATCAGAGTCGGCCG
GTGGCGTATCTCTTAACCATTAAGCAGAGAACGGCGGAGAGCCTCCATGATTAG
mRNA sequenceShow/hide mRNA sequence
ATGCAGGTGCAGTCCGAAAACCGATTTGTTGTTCTAGAGGAGAAGGTCAAAGGGATGTACCAGCGCATGACCCAACTGCTTCAACAATTGAAACAGAGGGAAGCAAGTCT
ACCGCCACTTGTCAGAGACCCCCGAAAGGGAAAGGGCTCGGCTCTGAGTGAGGCAGATGAGTCCCGAATGCTGACAAGGGACGACCCAAGTCTCCAACACCTGCTGAGGG
CAAAGATGAGCCGAATACCTGAGGAGATCTCGGGCAAGGGGACTTTGACAAAGAAAAGCTTGGAGAGCGGGCCCGAGTTATCCAAGAAGCAAGTAAGCTTGAAAGAGAAA
GGCTTCGACCTGGAAGAACTAATAGATCAAGCAGATTCCTCGTTCACGGAGGAGATAATGGGGGAGAAAGTCCCTCCGAAATTCAAGCTACCATCTCTAAAGCAGTTCGA
CGGAACGACTGGCCTGGTTGATCATCTTGATGCTTACCGAGAATGGATGGACATCTACAGGGTCTCAGAGGCAATCCAATGCCGCGTTTTCTCTTTCGCCCTAGATGGAT
CAGTTAGGGTTTGGTTCCGACAACTAAAGCGAGGGTCGATTTCAAGCTTCAAAAGCTTGGCCAGGGCATTTGTAACCCAGTTTGTAGGAGGTTGGAATCAGAGTCGGCCG
GTGGCGTATCTCTTAACCATTAAGCAGAGAACGGCGGAGAGCCTCCATGATTAG
Protein sequenceShow/hide protein sequence
MQVQSENRFVVLEEKVKGMYQRMTQLLQQLKQREASLPPLVRDPRKGKGSALSEADESRMLTRDDPSLQHLLRAKMSRIPEEISGKGTLTKKSLESGPELSKKQVSLKEK
GFDLEELIDQADSSFTEEIMGEKVPPKFKLPSLKQFDGTTGLVDHLDAYREWMDIYRVSEAIQCRVFSFALDGSVRVWFRQLKRGSISSFKSLARAFVTQFVGGWNQSRP
VAYLLTIKQRTAESLHD