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Moc03g01340 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g01340
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr3:1023534..1024187
RNA-Seq ExpressionMoc03g01340
SyntenyMoc03g01340
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022142767.1 uncharacterized protein LOC111012805 [Momordica charantia]1.2e-6365.26Show/hide
Query:  MEGLTDAVSLLAFMSGIKDEHL------------------------PGEFFHSKKESEGRRADQKRERSREKPLSSKWEKRDRVVGQKDLPMKFEKYTPT
        +EGLTDAVSLLAF+ G++DEHL                         GEFF+SK+ES G+R DQKRERS +KP  S+WEKRDR   QKD P KFEKYT T
Subjt:  MEGLTDAVSLLAFMSGIKDEHL------------------------PGEFFHSKKESEGRRADQKRERSREKPLSSKWEKRDRVVGQKDLPMKFEKYTPT

Query:  TVPLEQVLMEIKDQKLLKWPERMKAPPNKRSKGRYCLLQIDHGHVTQDCFDLKEVVEGLIRKGYLKEYVDDLKATPNRENDNKSPIREIRTIIGGSTEQE
        TVPLEQVLMEIK+Q+LLKWPERM A   KRSKGRYCL   DHGH TQDCFDLKE VEGLI +GYLKEYV++ KAT N E+D KSP REIRTI+GG  E+E
Subjt:  TVPLEQVLMEIKDQKLLKWPERMKAPPNKRSKGRYCLLQIDHGHVTQDCFDLKEVVEGLIRKGYLKEYVDDLKATPNRENDNKSPIREIRTIIGGSTEQE

Query:  SGRKRNTSVREAR
        SGRKR   VREAR
Subjt:  SGRKRNTSVREAR

XP_022143483.1 uncharacterized protein LOC111013355 [Momordica charantia]2.7e-4462.72Show/hide
Query:  GEFFHSKKESEGRRADQKRERSREKPLSSKWEKRDRVVGQKDLPMKFEKYTPTTVPLEQVLMEIKDQKLLKWPERMKAPPNKRSKGRYCLLQIDHGHVTQ
        GEFFHSKK+ EG+ +DQK ERSR+KP  S+WEKRDR   QKD P KF+KYTPTTVPL QV+M+IKDQ+LLK  ERMK P N                   
Subjt:  GEFFHSKKESEGRRADQKRERSREKPLSSKWEKRDRVVGQKDLPMKFEKYTPTTVPLEQVLMEIKDQKLLKWPERMKAPPNKRSKGRYCLLQIDHGHVTQ

Query:  DCFDLKEVVEGLIRKGYLKEYVDDLKATPNRENDNKSPIREIRTIIGGSTEQESGRKRNTSVREARMGL
         CFDLKE VEGLIR+GYLKEYV+D KAT N +ND+KSP REIRTI+GG  E+E GRKRN S+RE R  L
Subjt:  DCFDLKEVVEGLIRKGYLKEYVDDLKATPNRENDNKSPIREIRTIIGGSTEQESGRKRNTSVREARMGL

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]2.5e-6666.67Show/hide
Query:  MEGLTDAVSLLAFMSGIKDEHL------------------------PGEFFHSKKESEGRRADQKRERSREKPLSSKWEKRDRVVGQKDLPMKFEKYTPT
        +EGLTDAVSLLAFMSG++DEHL                         GEFF+SK+E +G+R D KRERS +KP  S+WEKRDR   QKD P KFEKYTPT
Subjt:  MEGLTDAVSLLAFMSGIKDEHL------------------------PGEFFHSKKESEGRRADQKRERSREKPLSSKWEKRDRVVGQKDLPMKFEKYTPT

Query:  TVPLEQVLMEIKDQKLLKWPERMKAPPNKRSKGRYCLLQIDHGHVTQDCFDLKEVVEGLIRKGYLKEYVDDLKATPNRENDNKSPIREIRTIIGGSTEQE
        TVP+EQVLMEIKDQ+LLKWPERMKA   KRSKGRYCL   DHGH TQDCFDLKE VEGLIR+GYLKEYV++ KAT N E+D KSP REIRTI+GG  E+E
Subjt:  TVPLEQVLMEIKDQKLLKWPERMKAPPNKRSKGRYCLLQIDHGHVTQDCFDLKEVVEGLIRKGYLKEYVDDLKATPNRENDNKSPIREIRTIIGGSTEQE

Query:  SGRKRNTSVREAR
        SGRKR   VREAR
Subjt:  SGRKRNTSVREAR

XP_022159192.1 uncharacterized protein LOC111025612 [Momordica charantia]6.0e-7677.23Show/hide
Query:  MSGIKDEHL------------------------PGEFFHSKKESEGRRADQKRERSREKPLSSKWEKRDRVVGQKDLPMKFEKYTPTTVPLEQVLMEIKD
        MSGIKDEHL                          EFFH KKE EG+RADQKRERS EKPLSSKWEK+DRVVGQKDLP KFEKYTPTTVPLEQVLMEIKD
Subjt:  MSGIKDEHL------------------------PGEFFHSKKESEGRRADQKRERSREKPLSSKWEKRDRVVGQKDLPMKFEKYTPTTVPLEQVLMEIKD

Query:  QKLLKWPERMKAPPNKRSKGRYCLLQIDHGHVTQDCFDLKEVVEGLIRKGYLKEYVDDLKATPNRENDNKSPIREIRTIIGGSTEQESGRKRNTSVREAR
        Q+LLKWPE MKAPPNKRSKGRYCL   DHGH T DCFDLKE VEGLIRKGYLKEYVDDLKATPNRENDNKSP REIRTI+GGSTEQES RKR  SVREAR
Subjt:  QKLLKWPERMKAPPNKRSKGRYCLLQIDHGHVTQDCFDLKEVVEGLIRKGYLKEYVDDLKATPNRENDNKSPIREIRTIIGGSTEQESGRKRNTSVREAR

Query:  MG
         G
Subjt:  MG

XP_022159368.1 uncharacterized protein LOC111025785 [Momordica charantia]3.4e-6364.32Show/hide
Query:  MEGLTDAVSLLAFMSGIKDEHL------------------------PGEFFHSKKESEGRRADQKRERSREKPLSSKWEKRDRVVGQKDLPMKFEKYTPT
        +E LTD VSLLAFMSG++DEHL                         GEFF+SK+E +G+R DQKRERS +KP  S+WEKRDR   QKD P KFEKYTPT
Subjt:  MEGLTDAVSLLAFMSGIKDEHL------------------------PGEFFHSKKESEGRRADQKRERSREKPLSSKWEKRDRVVGQKDLPMKFEKYTPT

Query:  TVPLEQVLMEIKDQKLLKWPERMKAPPNKRSKGRYCLLQIDHGHVTQDCFDLKEVVEGLIRKGYLKEYVDDLKATPNRENDNKSPIREIRTIIGGSTEQE
        TVPLEQVLMEIKDQ+LLKWPERMK P  KRSKGRYCL   DH H TQD FDLKE VEGLIR+GYL+EYV++ KAT N E++ KSP REIRTI+GG  E+E
Subjt:  TVPLEQVLMEIKDQKLLKWPERMKAPPNKRSKGRYCLLQIDHGHVTQDCFDLKEVVEGLIRKGYLKEYVDDLKATPNRENDNKSPIREIRTIIGGSTEQE

Query:  SGRKRNTSVREAR
        S RKR   VREAR
Subjt:  SGRKRNTSVREAR

TrEMBL top hitse value%identityAlignment
A0A6J1CNT2 uncharacterized protein LOC1110128055.6e-6465.26Show/hide
Query:  MEGLTDAVSLLAFMSGIKDEHL------------------------PGEFFHSKKESEGRRADQKRERSREKPLSSKWEKRDRVVGQKDLPMKFEKYTPT
        +EGLTDAVSLLAF+ G++DEHL                         GEFF+SK+ES G+R DQKRERS +KP  S+WEKRDR   QKD P KFEKYT T
Subjt:  MEGLTDAVSLLAFMSGIKDEHL------------------------PGEFFHSKKESEGRRADQKRERSREKPLSSKWEKRDRVVGQKDLPMKFEKYTPT

Query:  TVPLEQVLMEIKDQKLLKWPERMKAPPNKRSKGRYCLLQIDHGHVTQDCFDLKEVVEGLIRKGYLKEYVDDLKATPNRENDNKSPIREIRTIIGGSTEQE
        TVPLEQVLMEIK+Q+LLKWPERM A   KRSKGRYCL   DHGH TQDCFDLKE VEGLI +GYLKEYV++ KAT N E+D KSP REIRTI+GG  E+E
Subjt:  TVPLEQVLMEIKDQKLLKWPERMKAPPNKRSKGRYCLLQIDHGHVTQDCFDLKEVVEGLIRKGYLKEYVDDLKATPNRENDNKSPIREIRTIIGGSTEQE

Query:  SGRKRNTSVREAR
        SGRKR   VREAR
Subjt:  SGRKRNTSVREAR

A0A6J1CQU1 uncharacterized protein LOC1110133551.3e-4462.72Show/hide
Query:  GEFFHSKKESEGRRADQKRERSREKPLSSKWEKRDRVVGQKDLPMKFEKYTPTTVPLEQVLMEIKDQKLLKWPERMKAPPNKRSKGRYCLLQIDHGHVTQ
        GEFFHSKK+ EG+ +DQK ERSR+KP  S+WEKRDR   QKD P KF+KYTPTTVPL QV+M+IKDQ+LLK  ERMK P N                   
Subjt:  GEFFHSKKESEGRRADQKRERSREKPLSSKWEKRDRVVGQKDLPMKFEKYTPTTVPLEQVLMEIKDQKLLKWPERMKAPPNKRSKGRYCLLQIDHGHVTQ

Query:  DCFDLKEVVEGLIRKGYLKEYVDDLKATPNRENDNKSPIREIRTIIGGSTEQESGRKRNTSVREARMGL
         CFDLKE VEGLIR+GYLKEYV+D KAT N +ND+KSP REIRTI+GG  E+E GRKRN S+RE R  L
Subjt:  DCFDLKEVVEGLIRKGYLKEYVDDLKATPNRENDNKSPIREIRTIIGGSTEQESGRKRNTSVREARMGL

A0A6J1DWY0 uncharacterized protein LOC1110252931.2e-6666.67Show/hide
Query:  MEGLTDAVSLLAFMSGIKDEHL------------------------PGEFFHSKKESEGRRADQKRERSREKPLSSKWEKRDRVVGQKDLPMKFEKYTPT
        +EGLTDAVSLLAFMSG++DEHL                         GEFF+SK+E +G+R D KRERS +KP  S+WEKRDR   QKD P KFEKYTPT
Subjt:  MEGLTDAVSLLAFMSGIKDEHL------------------------PGEFFHSKKESEGRRADQKRERSREKPLSSKWEKRDRVVGQKDLPMKFEKYTPT

Query:  TVPLEQVLMEIKDQKLLKWPERMKAPPNKRSKGRYCLLQIDHGHVTQDCFDLKEVVEGLIRKGYLKEYVDDLKATPNRENDNKSPIREIRTIIGGSTEQE
        TVP+EQVLMEIKDQ+LLKWPERMKA   KRSKGRYCL   DHGH TQDCFDLKE VEGLIR+GYLKEYV++ KAT N E+D KSP REIRTI+GG  E+E
Subjt:  TVPLEQVLMEIKDQKLLKWPERMKAPPNKRSKGRYCLLQIDHGHVTQDCFDLKEVVEGLIRKGYLKEYVDDLKATPNRENDNKSPIREIRTIIGGSTEQE

Query:  SGRKRNTSVREAR
        SGRKR   VREAR
Subjt:  SGRKRNTSVREAR

A0A6J1DYL6 uncharacterized protein LOC1110257851.6e-6364.32Show/hide
Query:  MEGLTDAVSLLAFMSGIKDEHL------------------------PGEFFHSKKESEGRRADQKRERSREKPLSSKWEKRDRVVGQKDLPMKFEKYTPT
        +E LTD VSLLAFMSG++DEHL                         GEFF+SK+E +G+R DQKRERS +KP  S+WEKRDR   QKD P KFEKYTPT
Subjt:  MEGLTDAVSLLAFMSGIKDEHL------------------------PGEFFHSKKESEGRRADQKRERSREKPLSSKWEKRDRVVGQKDLPMKFEKYTPT

Query:  TVPLEQVLMEIKDQKLLKWPERMKAPPNKRSKGRYCLLQIDHGHVTQDCFDLKEVVEGLIRKGYLKEYVDDLKATPNRENDNKSPIREIRTIIGGSTEQE
        TVPLEQVLMEIKDQ+LLKWPERMK P  KRSKGRYCL   DH H TQD FDLKE VEGLIR+GYL+EYV++ KAT N E++ KSP REIRTI+GG  E+E
Subjt:  TVPLEQVLMEIKDQKLLKWPERMKAPPNKRSKGRYCLLQIDHGHVTQDCFDLKEVVEGLIRKGYLKEYVDDLKATPNRENDNKSPIREIRTIIGGSTEQE

Query:  SGRKRNTSVREAR
        S RKR   VREAR
Subjt:  SGRKRNTSVREAR

A0A6J1DZ52 uncharacterized protein LOC1110256122.9e-7677.23Show/hide
Query:  MSGIKDEHL------------------------PGEFFHSKKESEGRRADQKRERSREKPLSSKWEKRDRVVGQKDLPMKFEKYTPTTVPLEQVLMEIKD
        MSGIKDEHL                          EFFH KKE EG+RADQKRERS EKPLSSKWEK+DRVVGQKDLP KFEKYTPTTVPLEQVLMEIKD
Subjt:  MSGIKDEHL------------------------PGEFFHSKKESEGRRADQKRERSREKPLSSKWEKRDRVVGQKDLPMKFEKYTPTTVPLEQVLMEIKD

Query:  QKLLKWPERMKAPPNKRSKGRYCLLQIDHGHVTQDCFDLKEVVEGLIRKGYLKEYVDDLKATPNRENDNKSPIREIRTIIGGSTEQESGRKRNTSVREAR
        Q+LLKWPE MKAPPNKRSKGRYCL   DHGH T DCFDLKE VEGLIRKGYLKEYVDDLKATPNRENDNKSP REIRTI+GGSTEQES RKR  SVREAR
Subjt:  QKLLKWPERMKAPPNKRSKGRYCLLQIDHGHVTQDCFDLKEVVEGLIRKGYLKEYVDDLKATPNRENDNKSPIREIRTIIGGSTEQESGRKRNTSVREAR

Query:  MG
         G
Subjt:  MG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGGTCTAACTGATGCAGTATCGCTATTAGCATTCATGTCAGGCATCAAGGACGAGCACCTTCCTGGGGAGTTCTTCCATTCAAAGAAAGAGTCTGAAGGGAGGCG
CGCCGACCAGAAAAGAGAGAGATCAAGGGAAAAGCCCCTAAGCTCGAAGTGGGAGAAGCGAGATCGGGTCGTCGGACAGAAGGATCTACCTATGAAGTTTGAAAAGTATA
CTCCGACCACGGTTCCATTGGAGCAGGTATTGATGGAGATCAAAGACCAAAAGCTACTTAAATGGCCAGAGAGGATGAAGGCGCCTCCGAACAAGAGAAGCAAAGGGCGA
TACTGCCTCCTCCAAATAGACCATGGACATGTTACACAGGATTGCTTTGATCTCAAGGAAGTGGTAGAAGGGCTCATCCGGAAAGGGTACCTCAAAGAATATGTGGATGA
TCTCAAAGCAACTCCGAATAGGGAAAATGACAACAAATCCCCTATCAGGGAAATTCGTACGATCATTGGAGGTTCAACAGAACAGGAGTCTGGCAGGAAGAGAAATACAA
GTGTACGGGAAGCAAGAATGGGCCTAGGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGGTCTAACTGATGCAGTATCGCTATTAGCATTCATGTCAGGCATCAAGGACGAGCACCTTCCTGGGGAGTTCTTCCATTCAAAGAAAGAGTCTGAAGGGAGGCG
CGCCGACCAGAAAAGAGAGAGATCAAGGGAAAAGCCCCTAAGCTCGAAGTGGGAGAAGCGAGATCGGGTCGTCGGACAGAAGGATCTACCTATGAAGTTTGAAAAGTATA
CTCCGACCACGGTTCCATTGGAGCAGGTATTGATGGAGATCAAAGACCAAAAGCTACTTAAATGGCCAGAGAGGATGAAGGCGCCTCCGAACAAGAGAAGCAAAGGGCGA
TACTGCCTCCTCCAAATAGACCATGGACATGTTACACAGGATTGCTTTGATCTCAAGGAAGTGGTAGAAGGGCTCATCCGGAAAGGGTACCTCAAAGAATATGTGGATGA
TCTCAAAGCAACTCCGAATAGGGAAAATGACAACAAATCCCCTATCAGGGAAATTCGTACGATCATTGGAGGTTCAACAGAACAGGAGTCTGGCAGGAAGAGAAATACAA
GTGTACGGGAAGCAAGAATGGGCCTAGGGTAA
Protein sequenceShow/hide protein sequence
MEGLTDAVSLLAFMSGIKDEHLPGEFFHSKKESEGRRADQKRERSREKPLSSKWEKRDRVVGQKDLPMKFEKYTPTTVPLEQVLMEIKDQKLLKWPERMKAPPNKRSKGR
YCLLQIDHGHVTQDCFDLKEVVEGLIRKGYLKEYVDDLKATPNRENDNKSPIREIRTIIGGSTEQESGRKRNTSVREARMGLG