; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc03g01760 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g01760
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionSWIM-type domain-containing protein
Genome locationchr3:1333904..1337980
RNA-Seq ExpressionMoc03g01760
SyntenyMoc03g01760
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3957745.1 hypothetical protein CMV_017272 [Castanea mollissima]4.6e-2229.62Show/hide
Query:  IQYISGKVDCYTNFDPDYWSFFDVVDVVEQLGYYNYLKLWGRDP--TKEVGGYRVIESDKD--VIELASLLSDGMTFEIYVEHECEDEAILLDNDSDALP
        I+Y    ++ +   + D WS  ++ ++VE+LGY +Y KLW R P  + E GG R +  D D   + +A  +      E+YVEH C D   ++D+  D + 
Subjt:  IQYISGKVDCYTNFDPDYWSFFDVVDVVEQLGYYNYLKLWGRDP--TKEVGGYRVIESDKD--VIELASLLSDGMTFEIYVEHECEDEAILLDNDSDALP

Query:  YMSGCESEFEDDDDVLSNIYVDKDVEGTSKPSDI-IRTYDNVENNDGRNDID----SSELLSLKDSFDSEVCVVTKYPIYREITGDEKPYFELGMLFNLL
        Y    +     DD     +    D+   SK  D  +    N +   G +D D    S ELLS+ D  D+    +  YP++   T  +   F  GMLF  L
Subjt:  YMSGCESEFEDDDDVLSNIYVDKDVEGTSKPSDI-IRTYDNVENNDGRNDID----SSELLSLKDSFDSEVCVVTKYPIYREITGDEKPYFELGMLFNLL

Query:  SEFKNVVDDYAVQG---------------------------------EMTYQLKTFVGEHSCSRSFNNLRLTSRWLSRQIVNDVKEQ
         +FKNVV DYAV G                                 +MT+Q++T+ G H+C+R+F N R TS+WL + +V+++ ++
Subjt:  SEFKNVVDDYAVQG---------------------------------EMTYQLKTFVGEHSCSRSFNNLRLTSRWLSRQIVNDVKEQ

KAF7138490.1 hypothetical protein RHSIM_Rhsim07G0255600 [Rhododendron simsii]7.9e-2227.19Show/hide
Query:  IQYISGKVDCYTNFDPDYWSFFDVVDVVEQLGYYNYLKLWGRDPTKEV-GGYRVIESDKDVIELASLLSDGMTFEIYVEHECEDEAILLDNDSDALPY--
        ++Y+ G V+   + DPD  S  +V D+VE+LGY  Y  LW R P   +  G RVIE+DKD + + +++      EIYVEH  ++    LD +++ +P+  
Subjt:  IQYISGKVDCYTNFDPDYWSFFDVVDVVEQLGYYNYLKLWGRDPTKEV-GGYRVIESDKDVIELASLLSDGMTFEIYVEHECEDEAILLDNDSDALPY--

Query:  ------------------MSG----CESEFE--------------DDDDVLSNIYVDKDVEGTSKPSDIIRTYDN---VENNDGRNDIDSSELLSLKDSF
                          ++G    C S+ +              D DDVL + Y +K+ E T K +     +D+   ++N    ND   ++ +  +   
Subjt:  ------------------MSG----CESEFE--------------DDDDVLSNIYVDKDVEGTSKPSDIIRTYDN---VENNDGRNDIDSSELLSLKDSF

Query:  DSEVCVVTKYPIYREITGDEKPYFELGMLFNLLSEFKNVVDDYAVQG---------------------------------EMTYQLKTFVGEHSCSRSFN
                ++  ++     E   F  GMLF+ L +FK  + +YAV G                                 + T+QLKT   EH C+R++ 
Subjt:  DSEVCVVTKYPIYREITGDEKPYFELGMLFNLLSEFKNVVDDYAVQG---------------------------------EMTYQLKTFVGEHSCSRSFN

Query:  NLRLTSRWLSRQIVNDVKEQPDMRLKAIQDK
        N+RL+S++L+ ++V  VK+QP++RL  IQ+K
Subjt:  NLRLTSRWLSRQIVNDVKEQPDMRLKAIQDK

KAG5541483.1 hypothetical protein RHGRI_021341 [Rhododendron griersonianum]3.8e-2427.3Show/hide
Query:  QYISGKVDCYTNFDPDYWSFFDVVDVVEQLGYYNYLKLWGRDPTKEV--GGYRVIESDKDVIELASLLSDGMTFEIYVEHECEDEAILLDNDSDALPYMS
        +Y+ G V+   + D D WS  ++ +++  LGY  +  +W R P  E+  GG RV+  D D +++AS   +    E+YVEH  E+  ++ D   + LP +S
Subjt:  QYISGKVDCYTNFDPDYWSFFDVVDVVEQLGYYNYLKLWGRDPTKEV--GGYRVIESDKDVIELASLLSDGMTFEIYVEHECEDEAILLDNDSDALPYMS

Query:  G-------------CESEFED--------------------------DDDVLSNIYVDKDVEGTSKPSDIIRTYDNVENNDGRN-------------DID
        G             C+++  D                          DDD L + Y D  V+G  +  D     D +  +D                D +
Subjt:  G-------------CESEFED--------------------------DDDVLSNIYVDKDVEGTSKPSDIIRTYDNVENNDGRN-------------DID

Query:  SSELLSLKDSFDS----EVCVVTKYPIYREITGDEKPYFELGMLFNLLSEFKNVVDDYAVQG-----------------------------------EMT
        S ELLS   S +S    E   V  + +YR +   E   F+ GM+F  L++FK  V +YAV G                                   ++T
Subjt:  SSELLSLKDSFDS----EVCVVTKYPIYREITGDEKPYFELGMLFNLLSEFKNVVDDYAVQG-----------------------------------EMT

Query:  YQLKTFVGEHSCSRSFNNLRLTSRWLSRQIVNDVKEQPDMRLKAIQDK
        +Q+KT V EH+C+RS+ N+RL S++LS +++N VK+QP+++L  IQ++
Subjt:  YQLKTFVGEHSCSRSFNNLRLTSRWLSRQIVNDVKEQPDMRLKAIQDK

XP_022150916.1 uncharacterized protein LOC111018953 [Momordica charantia]3.7e-1972.37Show/hide
Query:  MTYQLKTFVGEHSCSRSFNNLRLTSRWLSRQIVNDVKEQPDMRLKAIQDK----------ACLFSVLTLPNLYACL
        MTYQLKTFVGEHSCSRSFNNLRLTSRWLSRQIVNDVKEQPDMRLKAIQDK            + ++ T   LY CL
Subjt:  MTYQLKTFVGEHSCSRSFNNLRLTSRWLSRQIVNDVKEQPDMRLKAIQDK----------ACLFSVLTLPNLYACL

XP_022153708.1 uncharacterized protein LOC111021158 [Momordica charantia]2.4e-11976.27Show/hide
Query:  MHEPYIQYISGKVDCYTNFDPDYWSFFDVVDVVEQLGYYNYLKLWGRDPTKEVGGYRVIESDKDVIELASLLSDGMTFEIYVEHECEDEAILLDNDSDAL
        +HEPYI+YISGKVD YTNFDPDYWSFF+V+ VVEQLGYY+YLKLWGRDPTKEVGGYR+IESDKDV+ELASLLSDGM FEIYVEHECEDEAILLDNDSDAL
Subjt:  MHEPYIQYISGKVDCYTNFDPDYWSFFDVVDVVEQLGYYNYLKLWGRDPTKEVGGYRVIESDKDVIELASLLSDGMTFEIYVEHECEDEAILLDNDSDAL

Query:  PYMSGCESEFEDDDDVLSNIYVDKDVEGT-SKPSDIIRTYDNVENNDGRNDIDSSELLSLKDSFDSEVCVVTKYPIYREITGDEKPYFELGMLFNLLSEF
        PY+SGCESEFEDDDD+LSNIY+DKDVEGT SKPS+II   DNVENNDG +DIDSSELLSLKDS DSEV V  KYP+YRE TGDEKP FELGM FN L EF
Subjt:  PYMSGCESEFEDDDDVLSNIYVDKDVEGT-SKPSDIIRTYDNVENNDGRNDIDSSELLSLKDSFDSEVCVVTKYPIYREITGDEKPYFELGMLFNLLSEF

Query:  KNVVDDYA---------------------------------VQGEMTYQLKTFVGEHSCSRSFNNLRLTSRWLSRQIVNDVKEQPDMRLKAIQDK
        KNVVDDYA                                 VQGEMTYQLKTFVGEHSCSRSF+N  LTSRWL RQIVNDVKEQPD+RL+AIQ+K
Subjt:  KNVVDDYA---------------------------------VQGEMTYQLKTFVGEHSCSRSFNNLRLTSRWLSRQIVNDVKEQPDMRLKAIQDK

TrEMBL top hitse value%identityAlignment
A0A2N9HKG1 SWIM-type domain-containing protein2.6e-1828.52Show/hide
Query:  VVEQLGYYNYLKLWGRDP--TKEVGGYRVIESDKDVIELASLLSDGMTFEIYVEHECEDEAILLDNDSDALPYMSGCESEFEDDDDVLSNIYVDKDVEGT
        +V +LGY    +LW R P  + E GG + + SD D + +  L+      E++VEH  E+  I    +SD            +DD  V  +  VD D E  
Subjt:  VVEQLGYYNYLKLWGRDP--TKEVGGYRVIESDKDVIELASLLSDGMTFEIYVEHECEDEAILLDNDSDALPYMSGCESEFEDDDDVLSNIYVDKDVEGT

Query:  SKPSDIIRTY---------DNVENNDGRNDIDSSELLSLKDSFDSEVCVVTK----------YPIYREITGDEKPYFELGMLFNLLSEFKNVVDDYAVQG
            D+   Y         D   NN   ++ D+   +      +S   V  +          +PI+R +   +   FELGMLF    +FK  + +YAV+G
Subjt:  SKPSDIIRTY---------DNVENNDGRNDIDSSELLSLKDSFDSEVCVVTK----------YPIYREITGDEKPYFELGMLFNLLSEFKNVVDDYAVQG

Query:  ---------------------------------EMTYQLKTFVGEHSCSRSFNNLRLTSRWLSRQIVNDVKEQPDMRLKAIQDK
                                         E+T+QLKT   EHSCSR F N R+T+++L++++V  VK+QPD++L++IQ K
Subjt:  ---------------------------------EMTYQLKTFVGEHSCSRSFNNLRLTSRWLSRQIVNDVKEQPDMRLKAIQDK

A0A6A4M1H5 DBD_Tnp_Mut domain-containing protein (Fragment)5.7e-1826.19Show/hide
Query:  IQYISGKVDCYTNFDPDYWSFFDVVDVVEQLGYYNYLKLWGRDPTKEV-GGYRVIESDKDVIELASLLSDGMTFEIYVEHECEDEAILLDNDSDALPYMS
        ++Y+ G V+   + DPD WS  +V D+VE+LGY NY  LW R P   +  G RVI +DKD + +  ++      EI+VEH  ++    LD +++ +P+ +
Subjt:  IQYISGKVDCYTNFDPDYWSFFDVVDVVEQLGYYNYLKLWGRDPTKEV-GGYRVIESDKDVIELASLLSDGMTFEIYVEHECEDEAILLDNDSDALPYMS

Query:  --------GCESEFEDD------------------------------DDVLSNIYVDKDVEGTSKPSDIIRTYDNVENNDG------------------R
                G E   ++D                              DDVL + Y +K+ E T + +     +D+    D                   R
Subjt:  --------GCESEFEDD------------------------------DDVLSNIYVDKDVEGTSKPSDIIRTYDNVENNDG------------------R

Query:  NDIDSSELLSLKDSFDSEVCVVT---------KYPIYREITGDEKPYFELGMLFNLLSEFKNVVDDYAVQG-----------------------------
        +D +S EL+S + S +SEV   T         ++  ++     E   F  GMLF+ L +FK  + +YAV G                             
Subjt:  NDIDSSELLSLKDSFDSEVCVVT---------KYPIYREITGDEKPYFELGMLFNLLSEFKNVVDDYAVQG-----------------------------

Query:  ----EMTYQLKTFVGEHSCSRSFNNLRLTSRWLSRQ
            + T+QLKT   EH C+R++ N+RL+S++L+ Q
Subjt:  ----EMTYQLKTFVGEHSCSRSFNNLRLTSRWLSRQ

A0A6J1D9B6 uncharacterized protein LOC1110184415.2e-1983.61Show/hide
Query:  YAVQGEMTYQLKTFVGEHSCSRSFNNLRLTSRWLSRQIVNDVKEQPDMRLKAIQDKACLFS
        Y VQGEMTYQLKTFVGEHSCSRSF+N RLTSRWLSRQIVNDVKEQ +MRL+AIQ+K   FS
Subjt:  YAVQGEMTYQLKTFVGEHSCSRSFNNLRLTSRWLSRQIVNDVKEQPDMRLKAIQDKACLFS

A0A6J1DCZ7 uncharacterized protein LOC1110189531.8e-1972.37Show/hide
Query:  MTYQLKTFVGEHSCSRSFNNLRLTSRWLSRQIVNDVKEQPDMRLKAIQDK----------ACLFSVLTLPNLYACL
        MTYQLKTFVGEHSCSRSFNNLRLTSRWLSRQIVNDVKEQPDMRLKAIQDK            + ++ T   LY CL
Subjt:  MTYQLKTFVGEHSCSRSFNNLRLTSRWLSRQIVNDVKEQPDMRLKAIQDK----------ACLFSVLTLPNLYACL

A0A6J1DI69 uncharacterized protein LOC1110211581.2e-11976.27Show/hide
Query:  MHEPYIQYISGKVDCYTNFDPDYWSFFDVVDVVEQLGYYNYLKLWGRDPTKEVGGYRVIESDKDVIELASLLSDGMTFEIYVEHECEDEAILLDNDSDAL
        +HEPYI+YISGKVD YTNFDPDYWSFF+V+ VVEQLGYY+YLKLWGRDPTKEVGGYR+IESDKDV+ELASLLSDGM FEIYVEHECEDEAILLDNDSDAL
Subjt:  MHEPYIQYISGKVDCYTNFDPDYWSFFDVVDVVEQLGYYNYLKLWGRDPTKEVGGYRVIESDKDVIELASLLSDGMTFEIYVEHECEDEAILLDNDSDAL

Query:  PYMSGCESEFEDDDDVLSNIYVDKDVEGT-SKPSDIIRTYDNVENNDGRNDIDSSELLSLKDSFDSEVCVVTKYPIYREITGDEKPYFELGMLFNLLSEF
        PY+SGCESEFEDDDD+LSNIY+DKDVEGT SKPS+II   DNVENNDG +DIDSSELLSLKDS DSEV V  KYP+YRE TGDEKP FELGM FN L EF
Subjt:  PYMSGCESEFEDDDDVLSNIYVDKDVEGT-SKPSDIIRTYDNVENNDGRNDIDSSELLSLKDSFDSEVCVVTKYPIYREITGDEKPYFELGMLFNLLSEF

Query:  KNVVDDYA---------------------------------VQGEMTYQLKTFVGEHSCSRSFNNLRLTSRWLSRQIVNDVKEQPDMRLKAIQDK
        KNVVDDYA                                 VQGEMTYQLKTFVGEHSCSRSF+N  LTSRWL RQIVNDVKEQPD+RL+AIQ+K
Subjt:  KNVVDDYA---------------------------------VQGEMTYQLKTFVGEHSCSRSFNNLRLTSRWLSRQIVNDVKEQPDMRLKAIQDK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATGAGCCATATATTCAATACATAAGTGGTAAGGTGGATTGCTATACAAATTTTGATCCAGATTATTGGTCTTTCTTTGATGTAGTTGATGTTGTTGAACAA
TTGGGGTACTATAATTATCTAAAATTGTGGGGTAGGGATCCAACAAAAGAGGTGGGTGGTTATCGAGTAATAGAATCTGATAAAGATGTCATAGAATTAGCTAGC
CTTTTAAGTGATGGAATGACATTTGAGATATATGTAGAACATGAATGTGAGGATGAAGCAATATTGTTAGACAATGATAGTGATGCATTACCATATATGAGTGGT
TGTGAATCTGAATTTGAAGATGATGATGATGTATTGTCTAATATATATGTTGATAAGGATGTAGAGGGTACTTCAAAACCATCGGATATCATAAGAACATATGAT
AATGTTGAGAATAATGATGGCAGAAATGATATTGACTCTAGCGAGCTACTCTCATTAAAAGACTCGTTTGATTCTGAAGTTTGTGTTGTAACAAAATATCCTATT
TATAGAGAAATAACAGGTGATGAGAAACCATACTTTGAATTAGGCATGTTATTTAACTTATTGAGTGAGTTCAAGAATGTTGTAGATGATTATGCTGTACAAGGA
GAAATGACTTATCAGTTGAAGACCTTTGTTGGTGAGCACTCGTGTAGTAGATCCTTCAACAATCTACGCCTAACATCTAGGTGGCTAAGTAGGCAGATTGTAAAT
GATGTGAAGGAACAACCAGATATGAGATTGAAAGCCATCCAGGATAAGGCCTGCCTGTTTTCTGTTTTAACCTTGCCGAACCTGTACGCGTGCCTTCTTCAGCAC
CTCGGGATTCTTTTCCCTGGTTTTACTGATTGGCTTTTAGCTTATTGGCCTGCTTCTAGGTCTGTCCCGGTCGAGTTCCTTGACTAG
mRNA sequenceShow/hide mRNA sequence
ATGCATGAGCCATATATTCAATACATAAGTGGTAAGGTGGATTGCTATACAAATTTTGATCCAGATTATTGGTCTTTCTTTGATGTAGTTGATGTTGTTGAACAA
TTGGGGTACTATAATTATCTAAAATTGTGGGGTAGGGATCCAACAAAAGAGGTGGGTGGTTATCGAGTAATAGAATCTGATAAAGATGTCATAGAATTAGCTAGC
CTTTTAAGTGATGGAATGACATTTGAGATATATGTAGAACATGAATGTGAGGATGAAGCAATATTGTTAGACAATGATAGTGATGCATTACCATATATGAGTGGT
TGTGAATCTGAATTTGAAGATGATGATGATGTATTGTCTAATATATATGTTGATAAGGATGTAGAGGGTACTTCAAAACCATCGGATATCATAAGAACATATGAT
AATGTTGAGAATAATGATGGCAGAAATGATATTGACTCTAGCGAGCTACTCTCATTAAAAGACTCGTTTGATTCTGAAGTTTGTGTTGTAACAAAATATCCTATT
TATAGAGAAATAACAGGTGATGAGAAACCATACTTTGAATTAGGCATGTTATTTAACTTATTGAGTGAGTTCAAGAATGTTGTAGATGATTATGCTGTACAAGGA
GAAATGACTTATCAGTTGAAGACCTTTGTTGGTGAGCACTCGTGTAGTAGATCCTTCAACAATCTACGCCTAACATCTAGGTGGCTAAGTAGGCAGATTGTAAAT
GATGTGAAGGAACAACCAGATATGAGATTGAAAGCCATCCAGGATAAGGCCTGCCTGTTTTCTGTTTTAACCTTGCCGAACCTGTACGCGTGCCTTCTTCAGCAC
CTCGGGATTCTTTTCCCTGGTTTTACTGATTGGCTTTTAGCTTATTGGCCTGCTTCTAGGTCTGTCCCGGTCGAGTTCCTTGACTAG
Protein sequenceShow/hide protein sequence
MHEPYIQYISGKVDCYTNFDPDYWSFFDVVDVVEQLGYYNYLKLWGRDPTKEVGGYRVIESDKDVIELASLLSDGMTFEIYVEHECEDEAILLDNDSDALPYMSG
CESEFEDDDDVLSNIYVDKDVEGTSKPSDIIRTYDNVENNDGRNDIDSSELLSLKDSFDSEVCVVTKYPIYREITGDEKPYFELGMLFNLLSEFKNVVDDYAVQG
EMTYQLKTFVGEHSCSRSFNNLRLTSRWLSRQIVNDVKEQPDMRLKAIQDKACLFSVLTLPNLYACLLQHLGILFPGFTDWLLAYWPASRSVPVEFLD