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Moc03g01810 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g01810
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr3:1370320..1372423
RNA-Seq ExpressionMoc03g01810
SyntenyMoc03g01810
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0030430 - host cell cytoplasm (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022136647.1 uncharacterized protein LOC111008302 [Momordica charantia]6.6e-2384.51Show/hide
Query:  EADLPKSGKREFSIPTEELNLVPLLSPEKQVSIGTKLGATTREELINFLRSNSDVFAWSHEDMPDIDPKIM
        EADLP   +RE + PTEEL LVPLLSPEKQVSIGTKLGAT REELI+FLRSNSDVFAWSHEDMP IDPKIM
Subjt:  EADLPKSGKREFSIPTEELNLVPLLSPEKQVSIGTKLGATTREELINFLRSNSDVFAWSHEDMPDIDPKIM

XP_022149378.1 uncharacterized protein LOC111017809 [Momordica charantia]1.4e-3675.93Show/hide
Query:  MVRGEQKTSRECYASELKGSSVCALEEQASLDELPKPEADLPKSGKREFSIPTEELNLVPLLSPEKQVSIGTKLGATTREELINFLRSNSDVFAWSHEDM
        +VRGEQ+ SRECYAS LKG SVCALEEQA  D+  + +ADLP+ GKREF   TEEL LVPLLSPE+QVSIGTKLGAT REE INFLR+NS+VFAWSHE+M
Subjt:  MVRGEQKTSRECYASELKGSSVCALEEQASLDELPKPEADLPKSGKREFSIPTEELNLVPLLSPEKQVSIGTKLGATTREELINFLRSNSDVFAWSHEDM

Query:  PDIDPKIM
        P IDPKIM
Subjt:  PDIDPKIM

XP_022149985.1 uncharacterized protein LOC111018267 [Momordica charantia]1.9e-4184.55Show/hide
Query:  VRGEQKTSRECYASELKGSSVCALEEQASLDELPKPEADLPKSGKREFSIPTEELNLVPLLSPEKQVSIGTKLGATTREELINFLRSNSDVFAWSHEDMP
        +RGEQKTSRECYAS LKGSSVCALEEQA+ DEL K EADLPK+GKREFS P EEL LVPLLS E+QVSI TKLGAT REELINFLRSNSDVFAWSHEDMP
Subjt:  VRGEQKTSRECYASELKGSSVCALEEQASLDELPKPEADLPKSGKREFSIPTEELNLVPLLSPEKQVSIGTKLGATTREELINFLRSNSDVFAWSHEDMP

Query:  DIDPKIMVGP
         ID KIMV P
Subjt:  DIDPKIMVGP

XP_022154846.1 uncharacterized protein LOC111022006 [Momordica charantia]2.6e-3576.92Show/hide
Query:  VRGEQKTSRECYASELKGSSVCALEEQASLDELPKPEADLPKSGKREFSIPTEELNLVPLLSPEKQVSIGTKLGATTREELINFLRSNSDVFAWSHEDMP
        VRGEQKTSR+CYAS LKG +VC LEEQ +  +L   EADLPK  KR+FS PTEEL LVPLLSPEK V+IGTKL AT R+ELINFLRSNSDVFAWSHEDMP
Subjt:  VRGEQKTSRECYASELKGSSVCALEEQASLDELPKPEADLPKSGKREFSIPTEELNLVPLLSPEKQVSIGTKLGATTREELINFLRSNSDVFAWSHEDMP

Query:  DIDP
         IDP
Subjt:  DIDP

XP_022159205.1 uncharacterized protein LOC111025624 [Momordica charantia]1.3e-2357.41Show/hide
Query:  VRGEQKTSRECYASELKGSSVCALEEQASLDELPKPEADLPKSGKREFSIPTEELNLVPLLSPEKQVSIGTKLGATTREELINFLRSNSDVFAWSHEDMP
        VRGEQK SRECYA+ +KG++ CA    A+     +P AD P   +     P EEL LVPLL PEKQVSIG++L A  +EEL++FL++N+DVFAWSH+DMP
Subjt:  VRGEQKTSRECYASELKGSSVCALEEQASLDELPKPEADLPKSGKREFSIPTEELNLVPLLSPEKQVSIGTKLGATTREELINFLRSNSDVFAWSHEDMP

Query:  DIDPKIMV
         IDP IMV
Subjt:  DIDPKIMV

TrEMBL top hitse value%identityAlignment
A0A6J1C617 Ribonuclease H3.2e-2384.51Show/hide
Query:  EADLPKSGKREFSIPTEELNLVPLLSPEKQVSIGTKLGATTREELINFLRSNSDVFAWSHEDMPDIDPKIM
        EADLP   +RE + PTEEL LVPLLSPEKQVSIGTKLGAT REELI+FLRSNSDVFAWSHEDMP IDPKIM
Subjt:  EADLPKSGKREFSIPTEELNLVPLLSPEKQVSIGTKLGATTREELINFLRSNSDVFAWSHEDMPDIDPKIM

A0A6J1D6M1 Ribonuclease H6.6e-3775.93Show/hide
Query:  MVRGEQKTSRECYASELKGSSVCALEEQASLDELPKPEADLPKSGKREFSIPTEELNLVPLLSPEKQVSIGTKLGATTREELINFLRSNSDVFAWSHEDM
        +VRGEQ+ SRECYAS LKG SVCALEEQA  D+  + +ADLP+ GKREF   TEEL LVPLLSPE+QVSIGTKLGAT REE INFLR+NS+VFAWSHE+M
Subjt:  MVRGEQKTSRECYASELKGSSVCALEEQASLDELPKPEADLPKSGKREFSIPTEELNLVPLLSPEKQVSIGTKLGATTREELINFLRSNSDVFAWSHEDM

Query:  PDIDPKIM
        P IDPKIM
Subjt:  PDIDPKIM

A0A6J1D787 uncharacterized protein LOC1110182679.0e-4284.55Show/hide
Query:  VRGEQKTSRECYASELKGSSVCALEEQASLDELPKPEADLPKSGKREFSIPTEELNLVPLLSPEKQVSIGTKLGATTREELINFLRSNSDVFAWSHEDMP
        +RGEQKTSRECYAS LKGSSVCALEEQA+ DEL K EADLPK+GKREFS P EEL LVPLLS E+QVSI TKLGAT REELINFLRSNSDVFAWSHEDMP
Subjt:  VRGEQKTSRECYASELKGSSVCALEEQASLDELPKPEADLPKSGKREFSIPTEELNLVPLLSPEKQVSIGTKLGATTREELINFLRSNSDVFAWSHEDMP

Query:  DIDPKIMVGP
         ID KIMV P
Subjt:  DIDPKIMVGP

A0A6J1DPX9 uncharacterized protein LOC1110220061.3e-3576.92Show/hide
Query:  VRGEQKTSRECYASELKGSSVCALEEQASLDELPKPEADLPKSGKREFSIPTEELNLVPLLSPEKQVSIGTKLGATTREELINFLRSNSDVFAWSHEDMP
        VRGEQKTSR+CYAS LKG +VC LEEQ +  +L   EADLPK  KR+FS PTEEL LVPLLSPEK V+IGTKL AT R+ELINFLRSNSDVFAWSHEDMP
Subjt:  VRGEQKTSRECYASELKGSSVCALEEQASLDELPKPEADLPKSGKREFSIPTEELNLVPLLSPEKQVSIGTKLGATTREELINFLRSNSDVFAWSHEDMP

Query:  DIDP
         IDP
Subjt:  DIDP

A0A6J1DY08 uncharacterized protein LOC1110256246.5e-2457.41Show/hide
Query:  VRGEQKTSRECYASELKGSSVCALEEQASLDELPKPEADLPKSGKREFSIPTEELNLVPLLSPEKQVSIGTKLGATTREELINFLRSNSDVFAWSHEDMP
        VRGEQK SRECYA+ +KG++ CA    A+     +P AD P   +     P EEL LVPLL PEKQVSIG++L A  +EEL++FL++N+DVFAWSH+DMP
Subjt:  VRGEQKTSRECYASELKGSSVCALEEQASLDELPKPEADLPKSGKREFSIPTEELNLVPLLSPEKQVSIGTKLGATTREELINFLRSNSDVFAWSHEDMP

Query:  DIDPKIMV
         IDP IMV
Subjt:  DIDPKIMV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCCGAGGAGAGCAGAAAACTTCAAGGGAGTGCTACGCCTCCGAGCTCAAGGGATCATCAGTATGCGCCCTAGAGGAACAAGCTAGCTTGGACGAGTTGCCGAAGCC
CGAGGCCGACCTACCGAAATCAGGAAAAAGGGAATTCTCAATACCAACAGAGGAGCTCAATCTTGTTCCTTTGCTTAGCCCCGAGAAACAAGTAAGCATAGGAACCAAGC
TGGGGGCCACTACCAGGGAGGAGCTGATCAACTTCCTCAGGTCCAACTCGGACGTCTTTGCATGGTCTCACGAGGACATGCCCGACATCGACCCAAAGATCATGGTCGGT
CCTAGTCGAGATCTTGGACAATCCTTCAATCTTGGAGCCAGACATGATGGAGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTCCGAGGAGAGCAGAAAACTTCAAGGGAGTGCTACGCCTCCGAGCTCAAGGGATCATCAGTATGCGCCCTAGAGGAACAAGCTAGCTTGGACGAGTTGCCGAAGCC
CGAGGCCGACCTACCGAAATCAGGAAAAAGGGAATTCTCAATACCAACAGAGGAGCTCAATCTTGTTCCTTTGCTTAGCCCCGAGAAACAAGTAAGCATAGGAACCAAGC
TGGGGGCCACTACCAGGGAGGAGCTGATCAACTTCCTCAGGTCCAACTCGGACGTCTTTGCATGGTCTCACGAGGACATGCCCGACATCGACCCAAAGATCATGGTCGGT
CCTAGTCGAGATCTTGGACAATCCTTCAATCTTGGAGCCAGACATGATGGAGATTGA
Protein sequenceShow/hide protein sequence
MVRGEQKTSRECYASELKGSSVCALEEQASLDELPKPEADLPKSGKREFSIPTEELNLVPLLSPEKQVSIGTKLGATTREELINFLRSNSDVFAWSHEDMPDIDPKIMVG
PSRDLGQSFNLGARHDGD