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Moc03g01840 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g01840
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr3:1385629..1391830
RNA-Seq ExpressionMoc03g01840
SyntenyMoc03g01840
Gene Ontology termsGO:0010073 - meristem maintenance (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025972.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]3.1e-0541.46Show/hide
Query:  VARLCNVGGRHLQSLHQMYKVPTPVRGPIRRGRRQVDQDAPVELDDSIPEVIYYNVEEVPSFTQTQDDAGPSTPMVMIPTSG
        V  +CN   RH++ +H MY +P  V   I RGR QV++    ELD+     +Y+NVEE+   TQ Q+  G  +PM+M+PT G
Subjt:  VARLCNVGGRHLQSLHQMYKVPTPVRGPIRRGRRQVDQDAPVELDDSIPEVIYYNVEEVPSFTQTQDDAGPSTPMVMIPTSG

KAA0038951.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]1.1e-0540.96Show/hide
Query:  VARLCNVGGRHLQSLHQMYKVPTPVRGPIRRGRRQVDQDAPVELDDSIPEVIYYNVEEVPSFTQTQDDAGPSTPMVMIPTSGS
        V  +CN   R+++ +H MY + + V  P+ RGR +V++    ELD+     +Y+NVEEVP  TQTQ   G  +PM M+PT G+
Subjt:  VARLCNVGGRHLQSLHQMYKVPTPVRGPIRRGRRQVDQDAPVELDDSIPEVIYYNVEEVPSFTQTQDDAGPSTPMVMIPTSGS

TYK11193.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]1.1e-0540.96Show/hide
Query:  VARLCNVGGRHLQSLHQMYKVPTPVRGPIRRGRRQVDQDAPVELDDSIPEVIYYNVEEVPSFTQTQDDAGPSTPMVMIPTSGS
        V  +CN   R+++ +H MY + + V  P+ RGR +V++    ELD+     +Y+NVEEVP  TQTQ   G  +PM M+PT G+
Subjt:  VARLCNVGGRHLQSLHQMYKVPTPVRGPIRRGRRQVDQDAPVELDDSIPEVIYYNVEEVPSFTQTQDDAGPSTPMVMIPTSGS

XP_022149984.1 serine/threonine-protein phosphatase 7 long form homolog [Momordica charantia]1.0e-1977.27Show/hide
Query:  MYKVPTPVRGPIRRGRRQVDQDAPVELDDSIPEVIYYNVEEVPSFTQTQDDAGPSTPMVMIPTSGS
        MY V TP RGP  RGRRQVDQDAP+ELDD +PEVIY+NVE++P FTQTQDDAG STPM MIPT GS
Subjt:  MYKVPTPVRGPIRRGRRQVDQDAPVELDDSIPEVIYYNVEEVPSFTQTQDDAGPSTPMVMIPTSGS

XP_022152034.1 disease resistance protein RGA2-like [Momordica charantia]1.0e-1663.16Show/hide
Query:  GRHLQSLHQMYKVPTPVRGPIRRGRRQVDQDAPVELDDSIPEVIYYNVEEVPSFTQTQDDAGPSTPMVMIPTSGSS
        GRHLQ LHQMY+VP P     RRGRRQ++QDAP E +   PE IY+NV+ VP F +TQ+D GP TPMVMIPT  SS
Subjt:  GRHLQSLHQMYKVPTPVRGPIRRGRRQVDQDAPVELDDSIPEVIYYNVEEVPSFTQTQDDAGPSTPMVMIPTSGSS

TrEMBL top hitse value%identityAlignment
A0A5A7SLF8 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.5e-0541.46Show/hide
Query:  VARLCNVGGRHLQSLHQMYKVPTPVRGPIRRGRRQVDQDAPVELDDSIPEVIYYNVEEVPSFTQTQDDAGPSTPMVMIPTSG
        V  +CN   RH++ +H MY +P  V   I RGR QV++    ELD+     +Y+NVEE+   TQ Q+  G  +PM+M+PT G
Subjt:  VARLCNVGGRHLQSLHQMYKVPTPVRGPIRRGRRQVDQDAPVELDDSIPEVIYYNVEEVPSFTQTQDDAGPSTPMVMIPTSG

A0A5A7TBF8 Mediator of RNA polymerase II transcription subunit 12-like isoform X15.2e-0640.96Show/hide
Query:  VARLCNVGGRHLQSLHQMYKVPTPVRGPIRRGRRQVDQDAPVELDDSIPEVIYYNVEEVPSFTQTQDDAGPSTPMVMIPTSGS
        V  +CN   R+++ +H MY + + V  P+ RGR +V++    ELD+     +Y+NVEEVP  TQTQ   G  +PM M+PT G+
Subjt:  VARLCNVGGRHLQSLHQMYKVPTPVRGPIRRGRRQVDQDAPVELDDSIPEVIYYNVEEVPSFTQTQDDAGPSTPMVMIPTSGS

A0A5D3CH23 Mediator of RNA polymerase II transcription subunit 12-like isoform X15.2e-0640.96Show/hide
Query:  VARLCNVGGRHLQSLHQMYKVPTPVRGPIRRGRRQVDQDAPVELDDSIPEVIYYNVEEVPSFTQTQDDAGPSTPMVMIPTSGS
        V  +CN   R+++ +H MY + + V  P+ RGR +V++    ELD+     +Y+NVEEVP  TQTQ   G  +PM M+PT G+
Subjt:  VARLCNVGGRHLQSLHQMYKVPTPVRGPIRRGRRQVDQDAPVELDDSIPEVIYYNVEEVPSFTQTQDDAGPSTPMVMIPTSGS

A0A6J1D8N6 serine/threonine-protein phosphatase 7 long form homolog4.9e-2077.27Show/hide
Query:  MYKVPTPVRGPIRRGRRQVDQDAPVELDDSIPEVIYYNVEEVPSFTQTQDDAGPSTPMVMIPTSGS
        MY V TP RGP  RGRRQVDQDAP+ELDD +PEVIY+NVE++P FTQTQDDAG STPM MIPT GS
Subjt:  MYKVPTPVRGPIRRGRRQVDQDAPVELDDSIPEVIYYNVEEVPSFTQTQDDAGPSTPMVMIPTSGS

A0A6J1DEU3 disease resistance protein RGA2-like5.0e-1763.16Show/hide
Query:  GRHLQSLHQMYKVPTPVRGPIRRGRRQVDQDAPVELDDSIPEVIYYNVEEVPSFTQTQDDAGPSTPMVMIPTSGSS
        GRHLQ LHQMY+VP P     RRGRRQ++QDAP E +   PE IY+NV+ VP F +TQ+D GP TPMVMIPT  SS
Subjt:  GRHLQSLHQMYKVPTPVRGPIRRGRRQVDQDAPVELDDSIPEVIYYNVEEVPSFTQTQDDAGPSTPMVMIPTSGSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATTTCTGGGCTTGGCTTAAAACCTCCAAGAAAGTGCCTGGAGTTCTCTTCCCAAAAGAGAATATCAATTGCTCGTCTTTCACACTGGATACAAAGGCTAGCAGTGC
CACTACATCTGTATGCTACAGTAGTATGCCCGAGGTCGGCTCGGTCAACTGGGTTGCTCTTGCTTTAGTTGGACACGACAACCTCTGTTGTCATACATCTGCTTGCCGAC
CTGACCGGCCGAAGACGTTGGTTCGAGAACTTCGATCGGTTTGTCTTTCTGTCCGAGAACTAGTCGGCCCGTATCCTTCTGTCCGTCATTTGGTCGGCTCGTATCCTTTG
AATGTTGTAGACTCCTTCCCGAACTCATGTCGACAAGTCTGCAATCTCCAGTCTTCCCTAAAGAGGGCGTCAATTGTTGATGCTAGAATTCGGCCTCTTGGGATCTCGCC
CAGTTCACACCAATCTTCTCGAACAACGGGATGGATGAGACCTGCAAAACAAAATAACGCTAAGACCGGTGTGGCTTTTGCCACACGGGCTCCGATGCTTAAGTTAGGCC
GAGACCAAGTCTACTCGGACTGGGCTGCGTGGGGGTCAGGGCGTATTGGAGAGGTTCTCAGCTACTGGGTCGAGAAGTCCTCGACGCCGAGGTCTGGTCGGCGCCTAGCA
ATGCTCGGCATTGCTCGACGTCGACCCCGGGTCGGCTATGGCCGGCCTGAGTTGTTGCTGGGCCCCGACCCAGTTACCTCTCTTTGGATCAAACCCCAAACAGATCGGAC
TTCGGCATGTATACTTAGCCTGTTCCCGATGGGTGAATCCGACCTCTTCGGCAGGGCCGATGTGGACCTGGGATATTCAATCCTTGCACACTATAGTGATAGCCTAGGCA
ACGCAGGTCGAACTATAAGCAGTTCGTCCCCCAAACCAAGTGATTCTGGGGAGGTCCTAGCTCTTAGGTTAGAGTCCGAGCTGGAAGAAATAGAAAATTGCACATGGCAG
GAACAGACTGCACCTTATGTGGCGAGGTTGTGTAACGTTGGTGGGAGACATCTGCAAAGCCTTCATCAGATGTATAAAGTGCCTACTCCGGTTCGTGGTCCTATACGTAG
AGGACGTCGTCAAGTAGATCAGGATGCCCCAGTAGAGCTTGATGATTCTATACCTGAAGTTATTTATTATAACGTCGAAGAGGTTCCATCGTTTACACAGACACAGGATG
ATGCTGGTCCGTCCACGCCTATGGTCATGATACCAACTTCTGGTTCTAGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTATTTCTGGGCTTGGCTTAAAACCTCCAAGAAAGTGCCTGGAGTTCTCTTCCCAAAAGAGAATATCAATTGCTCGTCTTTCACACTGGATACAAAGGCTAGCAGTGC
CACTACATCTGTATGCTACAGTAGTATGCCCGAGGTCGGCTCGGTCAACTGGGTTGCTCTTGCTTTAGTTGGACACGACAACCTCTGTTGTCATACATCTGCTTGCCGAC
CTGACCGGCCGAAGACGTTGGTTCGAGAACTTCGATCGGTTTGTCTTTCTGTCCGAGAACTAGTCGGCCCGTATCCTTCTGTCCGTCATTTGGTCGGCTCGTATCCTTTG
AATGTTGTAGACTCCTTCCCGAACTCATGTCGACAAGTCTGCAATCTCCAGTCTTCCCTAAAGAGGGCGTCAATTGTTGATGCTAGAATTCGGCCTCTTGGGATCTCGCC
CAGTTCACACCAATCTTCTCGAACAACGGGATGGATGAGACCTGCAAAACAAAATAACGCTAAGACCGGTGTGGCTTTTGCCACACGGGCTCCGATGCTTAAGTTAGGCC
GAGACCAAGTCTACTCGGACTGGGCTGCGTGGGGGTCAGGGCGTATTGGAGAGGTTCTCAGCTACTGGGTCGAGAAGTCCTCGACGCCGAGGTCTGGTCGGCGCCTAGCA
ATGCTCGGCATTGCTCGACGTCGACCCCGGGTCGGCTATGGCCGGCCTGAGTTGTTGCTGGGCCCCGACCCAGTTACCTCTCTTTGGATCAAACCCCAAACAGATCGGAC
TTCGGCATGTATACTTAGCCTGTTCCCGATGGGTGAATCCGACCTCTTCGGCAGGGCCGATGTGGACCTGGGATATTCAATCCTTGCACACTATAGTGATAGCCTAGGCA
ACGCAGGTCGAACTATAAGCAGTTCGTCCCCCAAACCAAGTGATTCTGGGGAGGTCCTAGCTCTTAGGTTAGAGTCCGAGCTGGAAGAAATAGAAAATTGCACATGGCAG
GAACAGACTGCACCTTATGTGGCGAGGTTGTGTAACGTTGGTGGGAGACATCTGCAAAGCCTTCATCAGATGTATAAAGTGCCTACTCCGGTTCGTGGTCCTATACGTAG
AGGACGTCGTCAAGTAGATCAGGATGCCCCAGTAGAGCTTGATGATTCTATACCTGAAGTTATTTATTATAACGTCGAAGAGGTTCCATCGTTTACACAGACACAGGATG
ATGCTGGTCCGTCCACGCCTATGGTCATGATACCAACTTCTGGTTCTAGTTAG
Protein sequenceShow/hide protein sequence
MYFWAWLKTSKKVPGVLFPKENINCSSFTLDTKASSATTSVCYSSMPEVGSVNWVALALVGHDNLCCHTSACRPDRPKTLVRELRSVCLSVRELVGPYPSVRHLVGSYPL
NVVDSFPNSCRQVCNLQSSLKRASIVDARIRPLGISPSSHQSSRTTGWMRPAKQNNAKTGVAFATRAPMLKLGRDQVYSDWAAWGSGRIGEVLSYWVEKSSTPRSGRRLA
MLGIARRRPRVGYGRPELLLGPDPVTSLWIKPQTDRTSACILSLFPMGESDLFGRADVDLGYSILAHYSDSLGNAGRTISSSSPKPSDSGEVLALRLESELEEIENCTWQ
EQTAPYVARLCNVGGRHLQSLHQMYKVPTPVRGPIRRGRRQVDQDAPVELDDSIPEVIYYNVEEVPSFTQTQDDAGPSTPMVMIPTSGSS