; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc03g01960 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g01960
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionDNA-directed DNA polymerase
Genome locationchr3:1473078..1478797
RNA-Seq ExpressionMoc03g01960
SyntenyMoc03g01960
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022147186.1 uncharacterized protein LOC111016198 [Momordica charantia]1.9e-4363.4Show/hide
Query:  KNVTLSVFNSIKYPNDVEECSLLRIADDLKSDEIQTEELLNQMEDELTRILKTGDKEAKLIQDQPNEPATDRIYKKTFEQLEFNDRVHAPLQPSMVKALK
        + VT  +FNSIK+P D+EECSLLR+ADDL+S+E+QTEELL+Q+E+E+T+I +  +KEAKLIQ +PNE ++DR+YKK FE  E  DR  A LQ S+ KA K
Subjt:  KNVTLSVFNSIKYPNDVEECSLLRIADDLKSDEIQTEELLNQMEDELTRILKTGDKEAKLIQDQPNEPATDRIYKKTFEQLEFNDRVHAPLQPSMVKALK

Query:  LELKVLPSHLKYAYLGEAKTLPVIIAAGLAEEKECCLIEMLKNHKRQLSPELA
        LELKVLP+HLKYAYLG+A+TL + IAA LAE+KE  LIEMLKNHKR +   +A
Subjt:  LELKVLPSHLKYAYLGEAKTLPVIIAAGLAEEKECCLIEMLKNHKRQLSPELA

XP_022156989.1 uncharacterized protein LOC111023818 [Momordica charantia]4.1e-3864.05Show/hide
Query:  KNVTLSVFNSIKYPNDVEECSLLRIADDLKSDEIQTEELLNQMEDELTRILKTGDKEAKLIQDQPNEPATDRIYKKTFEQLEFNDRVHAPLQPSMVKALK
        + VTLS+FNSIKYP DVEECS LRIADDL SDEIQTEELLNQ+EDELTRI+K                                DRV APLQPS+VKA K
Subjt:  KNVTLSVFNSIKYPNDVEECSLLRIADDLKSDEIQTEELLNQMEDELTRILKTGDKEAKLIQDQPNEPATDRIYKKTFEQLEFNDRVHAPLQPSMVKALK

Query:  LELKVLPSHLKYAYLGEAKTLPVIIAAGLAEEKECCLIEMLKNHKRQLSPELA
        LELKVLPSHLKYAYLGE +TLPV IAA LAEEKEC LIEML+NHK+ +   LA
Subjt:  LELKVLPSHLKYAYLGEAKTLPVIIAAGLAEEKECCLIEMLKNHKRQLSPELA

XP_030485610.1 uncharacterized protein LOC115702304 [Cannabis sativa]5.2e-1737.97Show/hide
Query:  KNVTLSVFNSIKYPNDVEECSLLRIADDLKSDEI-----QTEELLNQMEDELTRILKTGDKEAKLIQDQPNEPATDRIYKKTFEQLEFNDRVHAPLQPSM
        + VT +VFN++++ +++EECS L + D + ++       + E +++ +ED L  +  + D+E ++   +P +P+    +K++FE LE  +    P +PS+
Subjt:  KNVTLSVFNSIKYPNDVEECSLLRIADDLKSDEI-----QTEELLNQMEDELTRILKTGDKEAKLIQDQPNEPATDRIYKKTFEQLEFNDRVHAPLQPSM

Query:  VKALKLELKVLPSHLKYAYLGEAKTLPVIIAAGLAEEKECCLIEMLKNHKRQLSPELA
         +  KLELK LPSHLKYAYLGE + LP+II+A L  E E  L+E+LK HKR +   +A
Subjt:  VKALKLELKVLPSHLKYAYLGEAKTLPVIIAAGLAEEKECCLIEMLKNHKRQLSPELA

XP_030502183.1 uncharacterized protein LOC115717351 [Cannabis sativa]8.0e-1839.52Show/hide
Query:  EEVATETPVQKNVTLSVFNSIKYPNDVEECSLLRIADDLKSDEIQTE----ELLNQMEDELTRILKTGDKEAKLIQDQPNEPATDRIYKKTFEQLEFNDR
        EE+      QK VT +VFN++++P+++EECS + + D + +++   E    E      DEL  + +  D +   +  +P +P     +KK FE LE  + 
Subjt:  EEVATETPVQKNVTLSVFNSIKYPNDVEECSLLRIADDLKSDEIQTE----ELLNQMEDELTRILKTGDKEAKLIQDQPNEPATDRIYKKTFEQLEFNDR

Query:  VHAPLQPSMVKALKLELKVLPSHLKYAYLGEAKTLPVIIAAGLAEEKECCLIEMLKNHKRQLSPELA
           P +PS  +  KLELK LPSHLKYAYLGE  TLPVIIA+ L  E E  L+E+LK HK+ +   +A
Subjt:  VHAPLQPSMVKALKLELKVLPSHLKYAYLGEAKTLPVIIAAGLAEEKECCLIEMLKNHKRQLSPELA

XP_030504461.1 uncharacterized protein LOC115719521 [Cannabis sativa]3.3e-1940.51Show/hide
Query:  KNVTLSVFNSIKYPNDVEECSLLRIADDLKSDEI-----QTEELLNQMEDELTRILKTGDKEAKLIQDQPNEPATDRIYKKTFEQLEFNDRVHAPLQPSM
        + VT +VFN++++P+++EECS L + D + ++       + E +++ +ED L  +  + D+E ++   +P +P     +K+ FE LE  +    PL+PS+
Subjt:  KNVTLSVFNSIKYPNDVEECSLLRIADDLKSDEI-----QTEELLNQMEDELTRILKTGDKEAKLIQDQPNEPATDRIYKKTFEQLEFNDRVHAPLQPSM

Query:  VKALKLELKVLPSHLKYAYLGEAKTLPVIIAAGLAEEKECCLIEMLKNHKRQLSPELA
         +  KLELK LPSHLKYAYLGE +TLPVII+A L  E E  L+E+LK HKR +   +A
Subjt:  VKALKLELKVLPSHLKYAYLGEAKTLPVIIAAGLAEEKECCLIEMLKNHKRQLSPELA

TrEMBL top hitse value%identityAlignment
A0A2G9I815 DNA-directed DNA polymerase7.1e-1236.54Show/hide
Query:  KNVTLSVFNSIKYPNDVEECSLLRIADDLKSDEIQTEELLNQMEDELTRILKTGDKEAKLIQDQPNEPATDRIYKKTFEQLEFNDRVHAP---LQPSMVK
        + +T +VF +IK+PN+ +EC  + + D+L  +E   E+ L+ +E  L  +L   +KE     D+      D      +  +E  +R  AP   L+PS+ +
Subjt:  KNVTLSVFNSIKYPNDVEECSLLRIADDLKSDEIQTEELLNQMEDELTRILKTGDKEAKLIQDQPNEPATDRIYKKTFEQLEFNDRVHAP---LQPSMVK

Query:  ALKLELKVLPSHLKYAYLGEAKTLPVIIAAGLAEEKECCLIEMLKNHKRQLSPELA
           LELK LPSHL YAYLGE+ TLPVII++ L++ +   L+ +L+NHKR +   +A
Subjt:  ALKLELKVLPSHLKYAYLGEAKTLPVIIAAGLAEEKECCLIEMLKNHKRQLSPELA

A0A4Y1QSK5 Reverse transcriptase1.2e-1132.41Show/hide
Query:  KNVTLSVFNSIKYPNDVEECSLLRIADDLKSDEIQTEELLNQMEDELTRILKTGDKEAKLIQDQPNEPATDRIYKKTFEQLEFNDRVHAPLQPSMVKALK
        +  T  VF +IK+P + E+C  + + D++ SD  + E   + +E  L     + D    + +      A+   + +   Q E          PS++ A  
Subjt:  KNVTLSVFNSIKYPNDVEECSLLRIADDLKSDEIQTEELLNQMEDELTRILKTGDKEAKLIQDQPNEPATDRIYKKTFEQLEFNDRVHAPLQPSMVKALK

Query:  LELKVLPSHLKYAYLGEAKTLPVIIAAGLAEEKECCLIEMLKNHK
        L LK LP+HL+YAYLG ++TLPVIIAA L+E +E  ++ +L+ HK
Subjt:  LELKVLPSHLKYAYLGEAKTLPVIIAAGLAEEKECCLIEMLKNHK

A0A6J1D1L0 uncharacterized protein LOC1110161989.2e-4463.4Show/hide
Query:  KNVTLSVFNSIKYPNDVEECSLLRIADDLKSDEIQTEELLNQMEDELTRILKTGDKEAKLIQDQPNEPATDRIYKKTFEQLEFNDRVHAPLQPSMVKALK
        + VT  +FNSIK+P D+EECSLLR+ADDL+S+E+QTEELL+Q+E+E+T+I +  +KEAKLIQ +PNE ++DR+YKK FE  E  DR  A LQ S+ KA K
Subjt:  KNVTLSVFNSIKYPNDVEECSLLRIADDLKSDEIQTEELLNQMEDELTRILKTGDKEAKLIQDQPNEPATDRIYKKTFEQLEFNDRVHAPLQPSMVKALK

Query:  LELKVLPSHLKYAYLGEAKTLPVIIAAGLAEEKECCLIEMLKNHKRQLSPELA
        LELKVLP+HLKYAYLG+A+TL + IAA LAE+KE  LIEMLKNHKR +   +A
Subjt:  LELKVLPSHLKYAYLGEAKTLPVIIAAGLAEEKECCLIEMLKNHKRQLSPELA

A0A6J1DV77 uncharacterized protein LOC1110238182.0e-3864.05Show/hide
Query:  KNVTLSVFNSIKYPNDVEECSLLRIADDLKSDEIQTEELLNQMEDELTRILKTGDKEAKLIQDQPNEPATDRIYKKTFEQLEFNDRVHAPLQPSMVKALK
        + VTLS+FNSIKYP DVEECS LRIADDL SDEIQTEELLNQ+EDELTRI+K                                DRV APLQPS+VKA K
Subjt:  KNVTLSVFNSIKYPNDVEECSLLRIADDLKSDEIQTEELLNQMEDELTRILKTGDKEAKLIQDQPNEPATDRIYKKTFEQLEFNDRVHAPLQPSMVKALK

Query:  LELKVLPSHLKYAYLGEAKTLPVIIAAGLAEEKECCLIEMLKNHKRQLSPELA
        LELKVLPSHLKYAYLGE +TLPV IAA LAEEKEC LIEML+NHK+ +   LA
Subjt:  LELKVLPSHLKYAYLGEAKTLPVIIAAGLAEEKECCLIEMLKNHKRQLSPELA

A0A6N2NBX1 Uncharacterized protein4.6e-1134.59Show/hide
Query:  VTLSVFNSIKYPNDVEECSLLRIADDLKSDEIQTEELLNQMEDELTRILKTG--DKEAKLIQDQPNEPATDRIYKKTFEQLEFND------RVHAPLQPS
        VT ++F+++KYP++ E    + + D +  D+ +    LN M+D+L  +L+    DK+A+   D+  + A   ++        +          H    PS
Subjt:  VTLSVFNSIKYPNDVEECSLLRIADDLKSDEIQTEELLNQMEDELTRILKTG--DKEAKLIQDQPNEPATDRIYKKTFEQLEFND------RVHAPLQPS

Query:  MVKALKLELKVLPSHLKYAYLGEAKTLPVIIAAGLAEEKECCLIEMLKNHKRQLSPELA
        +V+  KLELK+LP+HLKY YLGE +TLPVIIA  L E  E  L+ +L+ HK  +   LA
Subjt:  MVKALKLELKVLPSHLKYAYLGEAKTLPVIIAAGLAEEKECCLIEMLKNHKRQLSPELA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGAGGATAACGTTGTGCAGCAGGAGGAACTTCAGACAGAGAAGGTAACTGAGAGTATAGTAGAGAATATGAATACTGAAGAGAATGTAGTGAATGATGCTAGAGC
ATCAGTTGAGCAAACAGCGCAACCAGAACCAGTGGCACCACAAAGAATGGTGAAGCAACCTGAGCCAGAGATAAACAAAACTAAGAGGGCCGCGAAAACAGAGCCTGTTG
AGGAAGTGGCTACAGAGACACCAGTGCAAAAGAATGTGACATTATCTGTTTTTAACTCCATTAAATACCCTAATGATGTGGAAGAATGCTCTTTGTTAAGGATTGCAGAT
GATTTGAAGAGTGATGAAATACAAACGGAAGAGTTGTTGAACCAAATGGAGGACGAGTTAACTAGAATTCTCAAAACAGGAGACAAGGAGGCCAAGCTGATCCAAGACCA
GCCGAATGAACCTGCTACTGATAGAATCTATAAGAAAACGTTTGAACAATTGGAATTTAATGACAGGGTGCACGCGCCACTGCAGCCATCCATGGTGAAGGCCCTCAAAT
TAGAGCTGAAAGTCCTACCATCACACCTTAAGTATGCTTATCTGGGAGAAGCAAAAACACTGCCAGTCATCATTGCAGCAGGCTTAGCCGAAGAAAAAGAGTGTTGTTTG
ATAGAAATGTTGAAGAATCACAAGAGGCAATTGTCGCCAGAGCTAGCGAAAGCTCCACCCCAACCCGACCCGTTACCCGAAAACACTGCCCCAGATAGCGAAATCCCTTC
CCCACCTAAAAAGAAACCCGTTGCCAAGAGAGGAAGGAAAGCCGCGAAAGGAAAGAAGCAGCCGCCTGTTCAAGTAGAAGAGGAGGAGCAGCTGGTTTTGGGCAGCCAAA
CCGATGCAGTCGGTCATAATGCTGAGCATGAAGAAGTACAACATGCCGAGACAGAGGTAGAAATAGGTCCAGAACTGTCGCTTGAAGCCAGACGCAGAGTCGAGGATTTT
ATGCAAAAGCTCTTCCAAGCGGACAGTAGCCATGAGCAAGCGGGCAGTGTTACCACAAGAAAAATGCAGAGAAAGAGGAAGCCCTCCCTAGTTGCAGAGCCTGGCAAATG
GAAGAGGCCCAAACAGAAGGTCGACATGCAGGCTAAGAAAAAGGGAAAAGAGAAGGTTGTTGTAGGGCCCTCAAAATTTTTGCGATTTGTCGATTCTGCAGAATCCGAGT
GGTTTGAAAGCCTCAAAAAGTGCAATCTGCTAGGAGAAAGGGGCTTTCCATCTGATTCATCCATGCCCCGTTTGTCTCCACCACCATCAACAATCATGAGTGGCAAACCG
TTTGCGCACAGCCCAAGCCTACGATCATCCAAATTGTTCAAGAATTCTACGCTAACCTCAACCCTAGTGACTATTCCAATGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAAGAGGATAACGTTGTGCAGCAGGAGGAACTTCAGACAGAGAAGGTAACTGAGAGTATAGTAGAGAATATGAATACTGAAGAGAATGTAGTGAATGATGCTAGAGC
ATCAGTTGAGCAAACAGCGCAACCAGAACCAGTGGCACCACAAAGAATGGTGAAGCAACCTGAGCCAGAGATAAACAAAACTAAGAGGGCCGCGAAAACAGAGCCTGTTG
AGGAAGTGGCTACAGAGACACCAGTGCAAAAGAATGTGACATTATCTGTTTTTAACTCCATTAAATACCCTAATGATGTGGAAGAATGCTCTTTGTTAAGGATTGCAGAT
GATTTGAAGAGTGATGAAATACAAACGGAAGAGTTGTTGAACCAAATGGAGGACGAGTTAACTAGAATTCTCAAAACAGGAGACAAGGAGGCCAAGCTGATCCAAGACCA
GCCGAATGAACCTGCTACTGATAGAATCTATAAGAAAACGTTTGAACAATTGGAATTTAATGACAGGGTGCACGCGCCACTGCAGCCATCCATGGTGAAGGCCCTCAAAT
TAGAGCTGAAAGTCCTACCATCACACCTTAAGTATGCTTATCTGGGAGAAGCAAAAACACTGCCAGTCATCATTGCAGCAGGCTTAGCCGAAGAAAAAGAGTGTTGTTTG
ATAGAAATGTTGAAGAATCACAAGAGGCAATTGTCGCCAGAGCTAGCGAAAGCTCCACCCCAACCCGACCCGTTACCCGAAAACACTGCCCCAGATAGCGAAATCCCTTC
CCCACCTAAAAAGAAACCCGTTGCCAAGAGAGGAAGGAAAGCCGCGAAAGGAAAGAAGCAGCCGCCTGTTCAAGTAGAAGAGGAGGAGCAGCTGGTTTTGGGCAGCCAAA
CCGATGCAGTCGGTCATAATGCTGAGCATGAAGAAGTACAACATGCCGAGACAGAGGTAGAAATAGGTCCAGAACTGTCGCTTGAAGCCAGACGCAGAGTCGAGGATTTT
ATGCAAAAGCTCTTCCAAGCGGACAGTAGCCATGAGCAAGCGGGCAGTGTTACCACAAGAAAAATGCAGAGAAAGAGGAAGCCCTCCCTAGTTGCAGAGCCTGGCAAATG
GAAGAGGCCCAAACAGAAGGTCGACATGCAGGCTAAGAAAAAGGGAAAAGAGAAGGTTGTTGTAGGGCCCTCAAAATTTTTGCGATTTGTCGATTCTGCAGAATCCGAGT
GGTTTGAAAGCCTCAAAAAGTGCAATCTGCTAGGAGAAAGGGGCTTTCCATCTGATTCATCCATGCCCCGTTTGTCTCCACCACCATCAACAATCATGAGTGGCAAACCG
TTTGCGCACAGCCCAAGCCTACGATCATCCAAATTGTTCAAGAATTCTACGCTAACCTCAACCCTAGTGACTATTCCAATGTGA
Protein sequenceShow/hide protein sequence
MQEDNVVQQEELQTEKVTESIVENMNTEENVVNDARASVEQTAQPEPVAPQRMVKQPEPEINKTKRAAKTEPVEEVATETPVQKNVTLSVFNSIKYPNDVEECSLLRIAD
DLKSDEIQTEELLNQMEDELTRILKTGDKEAKLIQDQPNEPATDRIYKKTFEQLEFNDRVHAPLQPSMVKALKLELKVLPSHLKYAYLGEAKTLPVIIAAGLAEEKECCL
IEMLKNHKRQLSPELAKAPPQPDPLPENTAPDSEIPSPPKKKPVAKRGRKAAKGKKQPPVQVEEEEQLVLGSQTDAVGHNAEHEEVQHAETEVEIGPELSLEARRRVEDF
MQKLFQADSSHEQAGSVTTRKMQRKRKPSLVAEPGKWKRPKQKVDMQAKKKGKEKVVVGPSKFLRFVDSAESEWFESLKKCNLLGERGFPSDSSMPRLSPPPSTIMSGKP
FAHSPSLRSSKLFKNSTLTSTLVTIPM