CuGenDBv2

Gene ID	Moc03g02080
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Thylakoid soluble phosphoprotein TSP9
Genome location	chr3:1552381..1556093
RNA-Seq Expression	Moc03g02080
Synteny	Moc03g02080
Gene Ontology terms	NA
InterPro domains	IPR021584 - Thylakoid soluble phosphoprotein TSP9 IPR037244 - Thylakoid soluble phosphoprotein TSP9 superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAF3970478.1 hypothetical protein CMV_005832 [Castanea mollissima]

1.6e-28

86.36

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Query:  MASLAVAFSPAAGRVFAATAAKGAGGSKEEKGLLDWILGGLQKEDQLLETDPILKKVEEKN-----DGRKNSVPVPQKKK-GGFGGLF
        MASL +AF+PAAGRVFAATAAKGAGGSKEEKGLLDWI+GGLQKEDQLLETDPILKKVEEKN     +GRKNSV VPQKKK GGFGGLF
Subjt:  MASLAVAFSPAAGRVFAATAAKGAGGSKEEKGLLDWILGGLQKEDQLLETDPILKKVEEKN-----DGRKNSVPVPQKKK-GGFGGLF

XP_007146732.1 hypothetical protein PHAVU_006G065100g [Phaseolus vulgaris]

9.3e-29

84.09

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Query:  MASLAVAFSPAAGRVFAATAAKGAGGSKEEKGLLDWILGGLQKEDQLLETDPILKKVEEKN------DGRKNSVPVPQKKKGGFGGLF
        MAS+ ++FSPA GRVFAATAAKGAGGSKEEKG LDWILGGLQKEDQLLETDPILKKVEEKN      +GRKNSV VPQKKKGGFGGLF
Subjt:  MASLAVAFSPAAGRVFAATAAKGAGGSKEEKGLLDWILGGLQKEDQLLETDPILKKVEEKN------DGRKNSVPVPQKKKGGFGGLF

XP_022150888.1 uncharacterized protein LOC111018931 [Momordica charantia]

1.1e-34

100

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Query:  MASLAVAFSPAAGRVFAATAAKGAGGSKEEKGLLDWILGGLQKEDQLLETDPILKKVEEKNDGRKNSVPVPQKKKGGFGGLF
        MASLAVAFSPAAGRVFAATAAKGAGGSKEEKGLLDWILGGLQKEDQLLETDPILKKVEEKNDGRKNSVPVPQKKKGGFGGLF
Subjt:  MASLAVAFSPAAGRVFAATAAKGAGGSKEEKGLLDWILGGLQKEDQLLETDPILKKVEEKNDGRKNSVPVPQKKKGGFGGLF

XP_023927584.1 uncharacterized protein LOC112038986 [Quercus suber]

3.5e-28

85.23

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Query:  MASLAVAFSPAAGRVFAATAAKGAGGSKEEKGLLDWILGGLQKEDQLLETDPILKKVEEK-----NDGRKNSVPVPQKKK-GGFGGLF
        MASL +AF+PAAGRVFAATAAKGAGGSKEEKGLLDWI+GGLQKEDQLLETDPILKKVEEK     ++GRKNSV VPQKKK GGFGGLF
Subjt:  MASLAVAFSPAAGRVFAATAAKGAGGSKEEKGLLDWILGGLQKEDQLLETDPILKKVEEK-----NDGRKNSVPVPQKKK-GGFGGLF

XP_030925866.1 uncharacterized protein LOC115952739 [Quercus lobata]

1.6e-28

86.36

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Query:  MASLAVAFSPAAGRVFAATAAKGAGGSKEEKGLLDWILGGLQKEDQLLETDPILKKVEEKN-----DGRKNSVPVPQKKK-GGFGGLF
        MASL +AF+PAAGRVFAATAAKGAGGSKEEKGLLDWI+GGLQKEDQLLETDPILKKVEEKN     +GRKNSV VPQKKK GGFGGLF
Subjt:  MASLAVAFSPAAGRVFAATAAKGAGGSKEEKGLLDWILGGLQKEDQLLETDPILKKVEEKN-----DGRKNSVPVPQKKK-GGFGGLF

TrEMBL top hits

e value

%identity

Alignment

A0A0R0EX21 Uncharacterized protein

2.9e-28

82.02

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Query:  MASLAVAFSPAAGRVFAATAAKGAGGSKEEKGLLDWILGGLQKEDQLLETDPILKKVEEKNDG-------RKNSVPVPQKKKGGFGGLF
        MAS+ ++F+PA GRVFAATAAKGAGGSKEEKGLLDWILGGLQKEDQLLETDPILKKVEEKN G        KNSV VPQKKKGGFGGLF
Subjt:  MASLAVAFSPAAGRVFAATAAKGAGGSKEEKGLLDWILGGLQKEDQLLETDPILKKVEEKNDG-------RKNSVPVPQKKKGGFGGLF

A0A6J1D9Q5 uncharacterized protein LOC111018931

5.5e-35

100

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Query:  MASLAVAFSPAAGRVFAATAAKGAGGSKEEKGLLDWILGGLQKEDQLLETDPILKKVEEKNDGRKNSVPVPQKKKGGFGGLF
        MASLAVAFSPAAGRVFAATAAKGAGGSKEEKGLLDWILGGLQKEDQLLETDPILKKVEEKNDGRKNSVPVPQKKKGGFGGLF
Subjt:  MASLAVAFSPAAGRVFAATAAKGAGGSKEEKGLLDWILGGLQKEDQLLETDPILKKVEEKNDGRKNSVPVPQKKKGGFGGLF

A0A7N2KPW5 Uncharacterized protein

7.7e-29

86.36

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Query:  MASLAVAFSPAAGRVFAATAAKGAGGSKEEKGLLDWILGGLQKEDQLLETDPILKKVEEKN-----DGRKNSVPVPQKKK-GGFGGLF
        MASL +AF+PAAGRVFAATAAKGAGGSKEEKGLLDWI+GGLQKEDQLLETDPILKKVEEKN     +GRKNSV VPQKKK GGFGGLF
Subjt:  MASLAVAFSPAAGRVFAATAAKGAGGSKEEKGLLDWILGGLQKEDQLLETDPILKKVEEKN-----DGRKNSVPVPQKKK-GGFGGLF

I1N020 Uncharacterized protein

2.9e-28

82.02

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Query:  MASLAVAFSPAAGRVFAATAAKGAGGSKEEKGLLDWILGGLQKEDQLLETDPILKKVEEKNDG-------RKNSVPVPQKKKGGFGGLF
        MAS+ ++F+PA GRVFAATAAKGAGGSKEEKGLLDWILGGLQKEDQLLETDPILKKVEEKN G        KNSV VPQKKKGGFGGLF
Subjt:  MASLAVAFSPAAGRVFAATAAKGAGGSKEEKGLLDWILGGLQKEDQLLETDPILKKVEEKNDG-------RKNSVPVPQKKKGGFGGLF

V7BQ66 Uncharacterized protein

4.5e-29

84.09

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Query:  MASLAVAFSPAAGRVFAATAAKGAGGSKEEKGLLDWILGGLQKEDQLLETDPILKKVEEKN------DGRKNSVPVPQKKKGGFGGLF
        MAS+ ++FSPA GRVFAATAAKGAGGSKEEKG LDWILGGLQKEDQLLETDPILKKVEEKN      +GRKNSV VPQKKKGGFGGLF
Subjt:  MASLAVAFSPAAGRVFAATAAKGAGGSKEEKGLLDWILGGLQKEDQLLETDPILKKVEEKN------DGRKNSVPVPQKKKGGFGGLF

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G47070.1 LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thylakoid soluble phosphoprotein TSP9 (InterPro:IPR021584); Has 37 Blast hits to 37 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

4.1e-14

47.31

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Query:  MASLAVAFSPAAGRVFAATAAKGAGGSKEEKGLLDWILGGLQKEDQLLETDPILKKVEEKND----------GRKNS--VPVPQKKKGGFGGL
        ++SL ++F+PA  RV+A +   G+GG KEEK  +D++LG + K+DQ  ET+P+LKKV+EK            G KNS   PVP+K +GGFGGL
Subjt:  MASLAVAFSPAAGRVFAATAAKGAGGSKEEKGLLDWILGGLQKEDQLLETDPILKKVEEKND----------GRKNS--VPVPQKKKGGFGGL

Sequences

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CDS sequence

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ATGGCTTCTCTCGCAGTAGCATTCTCTCCGGCCGCCGGAAGAGTTTTCGCGGCGACGGCTGCCAAGGGCGCCGGCGGAAGCAAGGAGGAGAAAGGACTTCTCGAT
TGGATTTTAGGAGGACTACAGAAAGAGGATCAGCTTCTCGAGACCGATCCGATCCTGAAGAAAGTGGAGGAGAAGAACGACGGCCGGAAAAACTCCGTGCCGGTG
CCGCAGAAGAAGAAAGGAGGATTCGGAGGACTATTTGAATCACGAGGTTGCTGCAACATGGGTGTTGTCACCACTGCAGAACCGACGTCGTGGAGGGACGCCGCT
AATGCAAGGGAGTCACACCGCCGTGGAGGGATGTCGCCACCGCTACTGTTCGAATCTGGGGAATGCATCGCCAAGCTACTGCAGATCATCGTTTATGGTGGGTTG
CGTCGTCACGAGTTTGTCGTTGCTTAG

mRNA sequence

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Protein sequence

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MASLAVAFSPAAGRVFAATAAKGAGGSKEEKGLLDWILGGLQKEDQLLETDPILKKVEEKNDGRKNSVPVPQKKKGGFGGLFESRGCCNMGVVTTAEPTSWRDAA
NARESHRRGGMSPPLLFESGECIAKLLQIIVYGGLRRHEFVVA

Moc03g02080 (gene) of Bitter gourd (OHB3-1) v2 genome