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Moc03g02140 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g02140
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr3:1603640..1606682
RNA-Seq ExpressionMoc03g02140
SyntenyMoc03g02140
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022150035.1 uncharacterized protein LOC111018307 [Momordica charantia]8.1e-2360.19Show/hide
Query:  FVTQFVGWQNRSQPMTYLLTIKQESTESLREYVACFNEERLLVKDLTDKISLLAFLSGIRDKELSFSFRKRAPTTFSEALTRAQNNMSAEELLHSKQSLD
        FVTQF+G ++RS+P+ YLLTIKQ +TESL +YVA FNEE+L V+ LT+ +SL+AF+S IRD+ LSFSF K+ P+TFSEAL+RAQ  MSA E   SK+  +
Subjt:  FVTQFVGWQNRSQPMTYLLTIKQESTESLREYVACFNEERLLVKDLTDKISLLAFLSGIRDKELSFSFRKRAPTTFSEALTRAQNNMSAEELLHSKQSLD

Query:  KTQ
          Q
Subjt:  KTQ
XP_022158344.1 uncharacterized protein LOC111024851 [Momordica charantia]5.6e-2461.39Show/hide
Query:  FVTQFVGWQNRSQPMTYLLTIKQESTESLREYVACFNEERLLVKDLTDKISLLAFLSGIRDKELSFSFRKRAPTTFSEALTRAQNNMSAEELLHSKQSLD
        FVTQFVG + +S+P+TYLLTIKQ++TESL+EYVA FNEE+L V+ LTD ++L+AF+SG++D+ L FSF KR P TF EAL+RAQ  MSA EL+H  + L+
Subjt:  FVTQFVGWQNRSQPMTYLLTIKQESTESLREYVACFNEERLLVKDLTDKISLLAFLSGIRDKELSFSFRKRAPTTFSEALTRAQNNMSAEELLHSKQSLD

Query:  K
        +
Subjt:  K
XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]6.0e-2653.74Show/hide
Query:  FVTQFVGWQNRSQPMTYLLTIKQESTESLREYVACFNEERLLVKDLTDKISLLAFLSGIRDKELSFSFRKRAPTTFSEALTRAQNNMSAEELLHSKQSLD
        FVTQFVG + RS+P+ YLLTIKQ +TESLR+YVA FNEE+L V+ LTD +SLLAF+SG+RD+ LSFSF KR P TFSEAL+RAQ  MSA E  +SK+  D
Subjt:  FVTQFVGWQNRSQPMTYLLTIKQESTESLREYVACFNEERLLVKDLTDKISLLAFLSGIRDKELSFSFRKRAPTTFSEALTRAQNNMSAEELLHSKQSLD

Query:  --------------------KTQDRLYQRD---ILEKFTPTTDSPEQ
                            + +DR  Q+D     EK+TPTT   EQ
Subjt:  --------------------KTQDRLYQRD---ILEKFTPTTDSPEQ
XP_022159109.1 uncharacterized protein LOC111025548 [Momordica charantia]5.6e-2460Show/hide
Query:  FVTQFVGWQNRSQPMTYLLTIKQESTESLREYVACFNEERLLVKDLTDKISLLAFLSGIRDKELSFSFRKRAPTTFSEALTRAQNNMSAEELLHSKQSLD
        F+TQFVG + RS+P+ YLLTIKQ + ESL +YVA FNEE+L ++ LTD +SLLAF+SG+RD+ LSFSF KR P+TFSEAL+RAQ  MSA E  +SK+  D
Subjt:  FVTQFVGWQNRSQPMTYLLTIKQESTESLREYVACFNEERLLVKDLTDKISLLAFLSGIRDKELSFSFRKRAPTTFSEALTRAQNNMSAEELLHSKQSLD

Query:  -KTQDRLYQR
         K  D+  +R
Subjt:  -KTQDRLYQR
XP_022159368.1 uncharacterized protein LOC111025785 [Momordica charantia]4.3e-2450.34Show/hide
Query:  FVTQFVGWQNRSQPMTYLLTIKQESTESLREYVACFNEERLLVKDLTDKISLLAFLSGIRDKELSFSFRKRAPTTFSEALTRAQNNMSAEELLHSKQSLD
        FVTQFVG + RS+P+ YLLTIKQ +TESL +YVA FN+E+L ++ LTD +SLLAF+SG+RD+ LSFSF K+ P+TFSE L+RAQ  MSA E  +SK+  D
Subjt:  FVTQFVGWQNRSQPMTYLLTIKQESTESLREYVACFNEERLLVKDLTDKISLLAFLSGIRDKELSFSFRKRAPTTFSEALTRAQNNMSAEELLHSKQSLD

Query:  --------------------KTQDRLYQRD---ILEKFTPTTDSPEQ
                            + +DR  Q+D     EK+TPTT   EQ
Subjt:  --------------------KTQDRLYQRD---ILEKFTPTTDSPEQ
TrEMBL top hitse value%identityAlignment
A0A6J1D7D2 uncharacterized protein LOC1110183073.9e-2360.19Show/hide
Query:  FVTQFVGWQNRSQPMTYLLTIKQESTESLREYVACFNEERLLVKDLTDKISLLAFLSGIRDKELSFSFRKRAPTTFSEALTRAQNNMSAEELLHSKQSLD
        FVTQF+G ++RS+P+ YLLTIKQ +TESL +YVA FNEE+L V+ LT+ +SL+AF+S IRD+ LSFSF K+ P+TFSEAL+RAQ  MSA E   SK+  +
Subjt:  FVTQFVGWQNRSQPMTYLLTIKQESTESLREYVACFNEERLLVKDLTDKISLLAFLSGIRDKELSFSFRKRAPTTFSEALTRAQNNMSAEELLHSKQSLD

Query:  KTQ
          Q
Subjt:  KTQ
A0A6J1DWY0 uncharacterized protein LOC1110252932.9e-2653.74Show/hide
Query:  FVTQFVGWQNRSQPMTYLLTIKQESTESLREYVACFNEERLLVKDLTDKISLLAFLSGIRDKELSFSFRKRAPTTFSEALTRAQNNMSAEELLHSKQSLD
        FVTQFVG + RS+P+ YLLTIKQ +TESLR+YVA FNEE+L V+ LTD +SLLAF+SG+RD+ LSFSF KR P TFSEAL+RAQ  MSA E  +SK+  D
Subjt:  FVTQFVGWQNRSQPMTYLLTIKQESTESLREYVACFNEERLLVKDLTDKISLLAFLSGIRDKELSFSFRKRAPTTFSEALTRAQNNMSAEELLHSKQSLD

Query:  --------------------KTQDRLYQRD---ILEKFTPTTDSPEQ
                            + +DR  Q+D     EK+TPTT   EQ
Subjt:  --------------------KTQDRLYQRD---ILEKFTPTTDSPEQ
A0A6J1DYL6 uncharacterized protein LOC1110257852.1e-2450.34Show/hide
Query:  FVTQFVGWQNRSQPMTYLLTIKQESTESLREYVACFNEERLLVKDLTDKISLLAFLSGIRDKELSFSFRKRAPTTFSEALTRAQNNMSAEELLHSKQSLD
        FVTQFVG + RS+P+ YLLTIKQ +TESL +YVA FN+E+L ++ LTD +SLLAF+SG+RD+ LSFSF K+ P+TFSE L+RAQ  MSA E  +SK+  D
Subjt:  FVTQFVGWQNRSQPMTYLLTIKQESTESLREYVACFNEERLLVKDLTDKISLLAFLSGIRDKELSFSFRKRAPTTFSEALTRAQNNMSAEELLHSKQSLD

Query:  --------------------KTQDRLYQRD---ILEKFTPTTDSPEQ
                            + +DR  Q+D     EK+TPTT   EQ
Subjt:  --------------------KTQDRLYQRD---ILEKFTPTTDSPEQ
A0A6J1DZ49 uncharacterized protein LOC1110248512.7e-2461.39Show/hide
Query:  FVTQFVGWQNRSQPMTYLLTIKQESTESLREYVACFNEERLLVKDLTDKISLLAFLSGIRDKELSFSFRKRAPTTFSEALTRAQNNMSAEELLHSKQSLD
        FVTQFVG + +S+P+TYLLTIKQ++TESL+EYVA FNEE+L V+ LTD ++L+AF+SG++D+ L FSF KR P TF EAL+RAQ  MSA EL+H  + L+
Subjt:  FVTQFVGWQNRSQPMTYLLTIKQESTESLREYVACFNEERLLVKDLTDKISLLAFLSGIRDKELSFSFRKRAPTTFSEALTRAQNNMSAEELLHSKQSLD

Query:  K
        +
Subjt:  K
A0A6J1E1E7 uncharacterized protein LOC1110255482.7e-2460Show/hide
Query:  FVTQFVGWQNRSQPMTYLLTIKQESTESLREYVACFNEERLLVKDLTDKISLLAFLSGIRDKELSFSFRKRAPTTFSEALTRAQNNMSAEELLHSKQSLD
        F+TQFVG + RS+P+ YLLTIKQ + ESL +YVA FNEE+L ++ LTD +SLLAF+SG+RD+ LSFSF KR P+TFSEAL+RAQ  MSA E  +SK+  D
Subjt:  FVTQFVGWQNRSQPMTYLLTIKQESTESLREYVACFNEERLLVKDLTDKISLLAFLSGIRDKELSFSFRKRAPTTFSEALTRAQNNMSAEELLHSKQSLD

Query:  -KTQDRLYQR
         K  D+  +R
Subjt:  -KTQDRLYQR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAATTGCTAAAAAGACCAAGCGACGGGGACCAGAGGAAATCCGAGAGAAAGCACGAACCAAGAAAGGGGGGCTGGCACCTGACGACTTGAGCCGGCCCCTGGCCGA
CCAGTGCTCAGTGCCGACCAGGCCTCGGCGCCGAGTAGTTCTCAGCCCTCCGACAGAGAACTGTAGCGGTTCATCCCGACCATTTCGCAGCCCCACTCGAAGATCCCGCC
TTGATTCTCGATTTGACCTAAAGCCCACAACGAACGAGCGAACCCGAATATTGAGATGTATGCGGATTCGACTGGGGCATCGGAGCTCATGTGACTGGAGTTACACCGAT
TTAGGTTTAATTGGTTTTGCAGGTCCTCTGTTCCCTGATTATCAAGTTTGGTGCGAACCTGGGAAGGAACCGGGAGAGCATAATTCACGCATCAACAATTGGTGCCGTAT
GTGGGGAACAATTCAGATCCAAAAGTCGAGACGATCAACAAGTCAACTAAGAACGTTTGGACCCAGAAGGGATGATTCAGATCAAAAAGTCGAGACGATCGACAAGTCGA
CCGAGAACTGCTCGAACCCAAGAAGGGACGATTCAGATCCAAAAGTCGAGACGATCAACAAGTTGACGGAGAACTGCTCGAATACCGAGGACTGCTCGGATCCGAGAAGC
GACAATTCAGGTCCAGAAGTCGAGACGATCAACAAGTCGACCGAGAGTTGCTCAAGATCCGAGAAGGGTGAAATAGGTCGACAATTTCCCGAGCAGGCCCTAGGTGATAC
AAGGCGACAGATTCCAAGGCAGAAAGAGCAACAAACAGAAATTCCTGAGCAGCAGGAGAACAAGTGGGCTACTTTAGAAAAGAAGATGGCAATAGTGAACCGAAACATGT
CTCTCATTCTTGAGAGACTTGAGCAACAAGAGGAGAGCACCAACATTGAGATCCATCCATTTGTCACGCAATTCGTTGGATGGCAGAATAGGAGTCAACCTATGACTTAT
CTCCTGACCATAAAGCAAGAATCAACTGAGAGTCTCAGAGAATATGTGGCTTGCTTCAACGAGGAAAGACTACTAGTCAAAGATCTTACCGACAAAATATCACTACTCGC
TTTCTTATCTGGCATAAGAGATAAAGAGCTGTCATTCTCTTTTAGAAAGAGAGCTCCAACAACCTTCTCAGAAGCATTGACTCGAGCTCAAAACAATATGAGCGCAGAAG
AACTACTCCATTCAAAACAGAGTCTTGACAAAACTCAAGACCGGTTGTATCAACGAGACATTTTGGAGAAATTTACTCCAACGACAGACTCACCCGAGCAAGAATCAGGA
GAGAGCAGTGAGTCTTGCACGGATGCTACTACGCCATCTCAAGATGATGCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAAATTGCTAAAAAGACCAAGCGACGGGGACCAGAGGAAATCCGAGAGAAAGCACGAACCAAGAAAGGGGGGCTGGCACCTGACGACTTGAGCCGGCCCCTGGCCGA
CCAGTGCTCAGTGCCGACCAGGCCTCGGCGCCGAGTAGTTCTCAGCCCTCCGACAGAGAACTGTAGCGGTTCATCCCGACCATTTCGCAGCCCCACTCGAAGATCCCGCC
TTGATTCTCGATTTGACCTAAAGCCCACAACGAACGAGCGAACCCGAATATTGAGATGTATGCGGATTCGACTGGGGCATCGGAGCTCATGTGACTGGAGTTACACCGAT
TTAGGTTTAATTGGTTTTGCAGGTCCTCTGTTCCCTGATTATCAAGTTTGGTGCGAACCTGGGAAGGAACCGGGAGAGCATAATTCACGCATCAACAATTGGTGCCGTAT
GTGGGGAACAATTCAGATCCAAAAGTCGAGACGATCAACAAGTCAACTAAGAACGTTTGGACCCAGAAGGGATGATTCAGATCAAAAAGTCGAGACGATCGACAAGTCGA
CCGAGAACTGCTCGAACCCAAGAAGGGACGATTCAGATCCAAAAGTCGAGACGATCAACAAGTTGACGGAGAACTGCTCGAATACCGAGGACTGCTCGGATCCGAGAAGC
GACAATTCAGGTCCAGAAGTCGAGACGATCAACAAGTCGACCGAGAGTTGCTCAAGATCCGAGAAGGGTGAAATAGGTCGACAATTTCCCGAGCAGGCCCTAGGTGATAC
AAGGCGACAGATTCCAAGGCAGAAAGAGCAACAAACAGAAATTCCTGAGCAGCAGGAGAACAAGTGGGCTACTTTAGAAAAGAAGATGGCAATAGTGAACCGAAACATGT
CTCTCATTCTTGAGAGACTTGAGCAACAAGAGGAGAGCACCAACATTGAGATCCATCCATTTGTCACGCAATTCGTTGGATGGCAGAATAGGAGTCAACCTATGACTTAT
CTCCTGACCATAAAGCAAGAATCAACTGAGAGTCTCAGAGAATATGTGGCTTGCTTCAACGAGGAAAGACTACTAGTCAAAGATCTTACCGACAAAATATCACTACTCGC
TTTCTTATCTGGCATAAGAGATAAAGAGCTGTCATTCTCTTTTAGAAAGAGAGCTCCAACAACCTTCTCAGAAGCATTGACTCGAGCTCAAAACAATATGAGCGCAGAAG
AACTACTCCATTCAAAACAGAGTCTTGACAAAACTCAAGACCGGTTGTATCAACGAGACATTTTGGAGAAATTTACTCCAACGACAGACTCACCCGAGCAAGAATCAGGA
GAGAGCAGTGAGTCTTGCACGGATGCTACTACGCCATCTCAAGATGATGCGTGA
Protein sequenceShow/hide protein sequence
MQIAKKTKRRGPEEIREKARTKKGGLAPDDLSRPLADQCSVPTRPRRRVVLSPPTENCSGSSRPFRSPTRRSRLDSRFDLKPTTNERTRILRCMRIRLGHRSSCDWSYTD
LGLIGFAGPLFPDYQVWCEPGKEPGEHNSRINNWCRMWGTIQIQKSRRSTSQLRTFGPRRDDSDQKVETIDKSTENCSNPRRDDSDPKVETINKLTENCSNTEDCSDPRS
DNSGPEVETINKSTESCSRSEKGEIGRQFPEQALGDTRRQIPRQKEQQTEIPEQQENKWATLEKKMAIVNRNMSLILERLEQQEESTNIEIHPFVTQFVGWQNRSQPMTY
LLTIKQESTESLREYVACFNEERLLVKDLTDKISLLAFLSGIRDKELSFSFRKRAPTTFSEALTRAQNNMSAEELLHSKQSLDKTQDRLYQRDILEKFTPTTDSPEQESG
ESSESCTDATTPSQDDA