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Moc03g02200 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g02200
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRNase H domain-containing protein
Genome locationchr3:1639571..1640130
RNA-Seq ExpressionMoc03g02200
SyntenyMoc03g02200
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022144467.1 uncharacterized protein LOC111014147 [Momordica charantia]7.9e-4367.11Show/hide
Query:  MKEPPNKRSKGRYCLFHRDHGHTTHDCFDLREEVEDLIRRGYHKEYVEDPKAAPNDEYDSKSTVREIQTILGCPTERESGRKIKASVREA----------
        MK P  KRSK RYCLFHR HGH T DCFDL+EEVE LIRRGY KEYVE+PKA  N E D KS  REI+TI+G P ERESGRK KA VREA          
Subjt:  MKEPPNKRSKGRYCLFHRDHGHTTHDCFDLREEVEDLIRRGYHKEYVEDPKAAPNDEYDSKSTVREIQTILGCPTERESGRKIKASVREA----------

Query:  -----RILVDRGSLADIISLAAYKAIDLGDRMLKSSPAPLVGSGGERVI
             R+LVD GSLADI+S  AYKA+DLG+++LKSSPAPLVG GGERVI
Subjt:  -----RILVDRGSLADIISLAAYKAIDLGDRMLKSSPAPLVGSGGERVI

XP_022151636.1 uncharacterized protein LOC111019544 [Momordica charantia]1.2e-3854.05Show/hide
Query:  MKEPPNKRSKGRYCLFHRDHGHTTHDCFDLREEVEDLIRRGYHKEYVEDPKAAPNDEYDSKSTVREIQTILGCPTERESGRKIKASVREA----------
        MK  PNKRSKGRYCLFHRDHGH THDCFDL+EEVE  I +GY KEY+EDPKA  N E D+KS  REIQTI+G  TE ESGRK K SVREA          
Subjt:  MKEPPNKRSKGRYCLFHRDHGHTTHDCFDLREEVEDLIRRGYHKEYVEDPKAAPNDEYDSKSTVREIQTILGCPTERESGRKIKASVREA----------

Query:  -----------------------------------------RILVDRGSLADIISLAAYKAIDLGDRMLKSSPAPLVGSGGERVI
                                                 RIL DRGS A IISL AYKA+DLG RMLKSS A  VG GG+RVI
Subjt:  -----------------------------------------RILVDRGSLADIISLAAYKAIDLGDRMLKSSPAPLVGSGGERVI

XP_022157420.1 uncharacterized protein LOC111024121 [Momordica charantia]2.0e-4165.52Show/hide
Query:  KRSKGRYCLFHRDHGHTTHDCFDLREEVEDLIRRGYHKEYVEDPKAAPNDEYDSKSTVREIQTILGCPTERESGRKIKASVREARILVDR----------
        ++ +GRYCLFHRDH HTT DCFDLREEVE+LIRR Y KEYV+DPKA P+D+ DSKS  REIQT+LG PTERES RK KASVREAR  + +          
Subjt:  KRSKGRYCLFHRDHGHTTHDCFDLREEVEDLIRRGYHKEYVEDPKAAPNDEYDSKSTVREIQTILGCPTERESGRKIKASVREARILVDR----------

Query:  -------GSLADIISLAAYKAIDLGDRMLKSSPAPLVGSGGERVI
               GS  DIISL  YKA+DLGDRMLKSSP  LVG GGERVI
Subjt:  -------GSLADIISLAAYKAIDLGDRMLKSSPAPLVGSGGERVI

XP_022158093.1 uncharacterized protein LOC111024662 [Momordica charantia]5.3e-3954.05Show/hide
Query:  MKEPPNKRSKGRYCLFHRDHGHTTHDCFDLREEVEDLIRRGYHKEYVEDPKAAPNDEYDSKSTVREIQTILGCPTERESGRKIKASVREA----------
        MK  PNKRSK RYCLFHRDHGH T DCFDL+EEVE LIRRGY KEYVEDPKA  N E D KS V+EIQTI G PTERE G+K KAS++EA          
Subjt:  MKEPPNKRSKGRYCLFHRDHGHTTHDCFDLREEVEDLIRRGYHKEYVEDPKAAPNDEYDSKSTVREIQTILGCPTERESGRKIKASVREA----------

Query:  -----------------------------------------RILVDRGSLADIISLAAYKAIDLGDRMLKSSPAPLVGSGGERVI
                                                 RILVD GS   IISL AYKA+DLG++ LKS+ APLVG GGERVI
Subjt:  -----------------------------------------RILVDRGSLADIISLAAYKAIDLGDRMLKSSPAPLVGSGGERVI

XP_022158827.1 uncharacterized protein LOC111025291 [Momordica charantia]6.5e-3753.26Show/hide
Query:  MKEPPNKRSKGRYCLFHRDHGHTTHDCFDLREEVEDLIRRGYHKEYVEDPKAAPNDEYDSKSTVREIQTILGCPTERESGRKIKASVREA----------
        MK+P  K +KGRYCLFHRDHGH T DCFDL+EEVE L RRGY KEYVED KA  N E D KS  REI+TI+G P ERESGRK KA VREA          
Subjt:  MKEPPNKRSKGRYCLFHRDHGHTTHDCFDLREEVEDLIRRGYHKEYVEDPKAAPNDEYDSKSTVREIQTILGCPTERESGRKIKASVREA----------

Query:  -----------------------------------------RILVDRGSLADIISLAAYKAIDLGDRMLKSSPAPLVGSGGERV
                                                 RILVD GS ADIIS  AYKA+DLG+++LKSS APLVG GGERV
Subjt:  -----------------------------------------RILVDRGSLADIISLAAYKAIDLGDRMLKSSPAPLVGSGGERV

TrEMBL top hitse value%identityAlignment
A0A6J1CTS4 uncharacterized protein LOC1110141473.8e-4367.11Show/hide
Query:  MKEPPNKRSKGRYCLFHRDHGHTTHDCFDLREEVEDLIRRGYHKEYVEDPKAAPNDEYDSKSTVREIQTILGCPTERESGRKIKASVREA----------
        MK P  KRSK RYCLFHR HGH T DCFDL+EEVE LIRRGY KEYVE+PKA  N E D KS  REI+TI+G P ERESGRK KA VREA          
Subjt:  MKEPPNKRSKGRYCLFHRDHGHTTHDCFDLREEVEDLIRRGYHKEYVEDPKAAPNDEYDSKSTVREIQTILGCPTERESGRKIKASVREA----------

Query:  -----RILVDRGSLADIISLAAYKAIDLGDRMLKSSPAPLVGSGGERVI
             R+LVD GSLADI+S  AYKA+DLG+++LKSSPAPLVG GGERVI
Subjt:  -----RILVDRGSLADIISLAAYKAIDLGDRMLKSSPAPLVGSGGERVI

A0A6J1DF96 uncharacterized protein LOC1110195445.7e-3954.05Show/hide
Query:  MKEPPNKRSKGRYCLFHRDHGHTTHDCFDLREEVEDLIRRGYHKEYVEDPKAAPNDEYDSKSTVREIQTILGCPTERESGRKIKASVREA----------
        MK  PNKRSKGRYCLFHRDHGH THDCFDL+EEVE  I +GY KEY+EDPKA  N E D+KS  REIQTI+G  TE ESGRK K SVREA          
Subjt:  MKEPPNKRSKGRYCLFHRDHGHTTHDCFDLREEVEDLIRRGYHKEYVEDPKAAPNDEYDSKSTVREIQTILGCPTERESGRKIKASVREA----------

Query:  -----------------------------------------RILVDRGSLADIISLAAYKAIDLGDRMLKSSPAPLVGSGGERVI
                                                 RIL DRGS A IISL AYKA+DLG RMLKSS A  VG GG+RVI
Subjt:  -----------------------------------------RILVDRGSLADIISLAAYKAIDLGDRMLKSSPAPLVGSGGERVI

A0A6J1DT18 uncharacterized protein LOC1110241219.5e-4265.52Show/hide
Query:  KRSKGRYCLFHRDHGHTTHDCFDLREEVEDLIRRGYHKEYVEDPKAAPNDEYDSKSTVREIQTILGCPTERESGRKIKASVREARILVDR----------
        ++ +GRYCLFHRDH HTT DCFDLREEVE+LIRR Y KEYV+DPKA P+D+ DSKS  REIQT+LG PTERES RK KASVREAR  + +          
Subjt:  KRSKGRYCLFHRDHGHTTHDCFDLREEVEDLIRRGYHKEYVEDPKAAPNDEYDSKSTVREIQTILGCPTERESGRKIKASVREARILVDR----------

Query:  -------GSLADIISLAAYKAIDLGDRMLKSSPAPLVGSGGERVI
               GS  DIISL  YKA+DLGDRMLKSSP  LVG GGERVI
Subjt:  -------GSLADIISLAAYKAIDLGDRMLKSSPAPLVGSGGERVI

A0A6J1DV51 uncharacterized protein LOC1110246622.6e-3954.05Show/hide
Query:  MKEPPNKRSKGRYCLFHRDHGHTTHDCFDLREEVEDLIRRGYHKEYVEDPKAAPNDEYDSKSTVREIQTILGCPTERESGRKIKASVREA----------
        MK  PNKRSK RYCLFHRDHGH T DCFDL+EEVE LIRRGY KEYVEDPKA  N E D KS V+EIQTI G PTERE G+K KAS++EA          
Subjt:  MKEPPNKRSKGRYCLFHRDHGHTTHDCFDLREEVEDLIRRGYHKEYVEDPKAAPNDEYDSKSTVREIQTILGCPTERESGRKIKASVREA----------

Query:  -----------------------------------------RILVDRGSLADIISLAAYKAIDLGDRMLKSSPAPLVGSGGERVI
                                                 RILVD GS   IISL AYKA+DLG++ LKS+ APLVG GGERVI
Subjt:  -----------------------------------------RILVDRGSLADIISLAAYKAIDLGDRMLKSSPAPLVGSGGERVI

A0A6J1DY78 uncharacterized protein LOC1110252913.1e-3753.26Show/hide
Query:  MKEPPNKRSKGRYCLFHRDHGHTTHDCFDLREEVEDLIRRGYHKEYVEDPKAAPNDEYDSKSTVREIQTILGCPTERESGRKIKASVREA----------
        MK+P  K +KGRYCLFHRDHGH T DCFDL+EEVE L RRGY KEYVED KA  N E D KS  REI+TI+G P ERESGRK KA VREA          
Subjt:  MKEPPNKRSKGRYCLFHRDHGHTTHDCFDLREEVEDLIRRGYHKEYVEDPKAAPNDEYDSKSTVREIQTILGCPTERESGRKIKASVREA----------

Query:  -----------------------------------------RILVDRGSLADIISLAAYKAIDLGDRMLKSSPAPLVGSGGERV
                                                 RILVD GS ADIIS  AYKA+DLG+++LKSS APLVG GGERV
Subjt:  -----------------------------------------RILVDRGSLADIISLAAYKAIDLGDRMLKSSPAPLVGSGGERV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGAGCCGCCAAACAAAAGAAGTAAGGGGCGATATTGCCTCTTTCATCGAGACCATGGCCATACGACACATGACTGCTTCGACCTCAGGGAAGAAGTGGAAGATCT
CATTCGAAGGGGATACCACAAGGAATACGTAGAAGATCCCAAGGCGGCCCCGAACGACGAGTACGATAGCAAATCCACGGTCAGAGAGATACAGACAATACTAGGATGTC
CTACGGAGAGAGAATCTGGCAGGAAGATAAAGGCGAGTGTGCGAGAAGCTAGGATCCTGGTAGATCGGGGTAGCTTGGCTGACATCATATCACTGGCAGCCTATAAAGCC
ATAGATTTAGGGGATAGAATGCTGAAAAGTAGCCCAGCCCCACTGGTAGGATCCGGAGGAGAACGGGTCATCCTATAA
mRNA sequenceShow/hide mRNA sequence
ATGAAAGAGCCGCCAAACAAAAGAAGTAAGGGGCGATATTGCCTCTTTCATCGAGACCATGGCCATACGACACATGACTGCTTCGACCTCAGGGAAGAAGTGGAAGATCT
CATTCGAAGGGGATACCACAAGGAATACGTAGAAGATCCCAAGGCGGCCCCGAACGACGAGTACGATAGCAAATCCACGGTCAGAGAGATACAGACAATACTAGGATGTC
CTACGGAGAGAGAATCTGGCAGGAAGATAAAGGCGAGTGTGCGAGAAGCTAGGATCCTGGTAGATCGGGGTAGCTTGGCTGACATCATATCACTGGCAGCCTATAAAGCC
ATAGATTTAGGGGATAGAATGCTGAAAAGTAGCCCAGCCCCACTGGTAGGATCCGGAGGAGAACGGGTCATCCTATAA
Protein sequenceShow/hide protein sequence
MKEPPNKRSKGRYCLFHRDHGHTTHDCFDLREEVEDLIRRGYHKEYVEDPKAAPNDEYDSKSTVREIQTILGCPTERESGRKIKASVREARILVDRGSLADIISLAAYKA
IDLGDRMLKSSPAPLVGSGGERVIL