; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc03g02270 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g02270
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrotransposable element Tf2
Genome locationchr3:1731552..1732814
RNA-Seq ExpressionMoc03g02270
SyntenyMoc03g02270
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032916.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa]3.1e-17874.11Show/hide
Query:  MSAENYAMDIQFETVSRRQPGSSQRTLTIQSGSPSL-PTPSSTLLRPFGNTTRNRRPVKA-AAAPKPTIPRNPSSFSQIVRPKVYQPRPPIYGYFTKTTL
        MSAENYAMD+QFE VSRR+ GS+QRTLTIQS S SL P PS+ LLRP G TT N R     A++ +  IPRNPSS+SQIVRPK++QPRPPI GYFT TT+
Subjt:  MSAENYAMDIQFETVSRRQPGSSQRTLTIQSGSPSL-PTPSSTLLRPFGNTTRNRRPVKA-AAAPKPTIPRNPSSFSQIVRPKVYQPRPPIYGYFTKTTL

Query:  VDSTIESEFDGPSVQEVCSQIFPHGFNFLPEDLQKTRTYYEFILVDSKSAEITHIPDRNDPSRTIYSKLKIFRILTPSSWKQGMFVGKKLTATFQPQTYN
        VD TIE EFDGPSVQEVCSQIFPHGFNFLPEDL KTRT+YE+ILVDSKSAEITH+PD+NDPS+ IYSKL+IFR+LTPS WKQGMFVG+K +  F+P +YN
Subjt:  VDSTIESEFDGPSVQEVCSQIFPHGFNFLPEDLQKTRTYYEFILVDSKSAEITHIPDRNDPSRTIYSKLKIFRILTPSSWKQGMFVGKKLTATFQPQTYN

Query:  YLDYMKVWYIVFWLQCYNHSWFVTFCKQAYKSHFPNWFQTWWTYFGLSEEILLVEVRRSYHLFQQSIYLSPLSKTFRFALYFQIPWIFCWNFQLGPSGNF
        Y DY K WYIVFWL  YNHSWFVTFCKQAYK HFPNWFQ WW YFGLSEEI  VE++RSYHLFQQSIY SPLSKTFRFALYFQIPWIFCWNFQLGPSGNF
Subjt:  YLDYMKVWYIVFWLQCYNHSWFVTFCKQAYKSHFPNWFQTWWTYFGLSEEILLVEVRRSYHLFQQSIYLSPLSKTFRFALYFQIPWIFCWNFQLGPSGNF

Query:  KALSKALRIKWWEKFDYFYLESDKMKDWLKTNVHLQDMTRQEDESFLLAKNAVMSSLAGAGSQADFNSILNTVAVQISDPDDVQTDVDSSASINNDAVDD
        KALSK+LRIKWWEKF+Y +LE +K+KDW K N+HLQDMT QEDE+FLL KNAVMS+LAGA +Q +FNS++N V V +SD +D   +  S AS+N+  VDD
Subjt:  KALSKALRIKWWEKFDYFYLESDKMKDWLKTNVHLQDMTRQEDESFLLAKNAVMSSLAGAGSQADFNSILNTVAVQISDPDDVQTDVDSSASINNDAVDD

Query:  EEYFDPFEGYDINDPYLDSQP
         +Y DP+EG DINDP+LD+QP
Subjt:  EEYFDPFEGYDINDPYLDSQP

KAA0056777.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa]1.0e-18175.53Show/hide
Query:  MSAENYAMDIQFETVSRRQPGSSQRTLTIQSGSPSL-PTPSSTLLRPFGNTTRNRRPVK-AAAAPKPTIPRNPSSFSQIVRPKVYQPRPPIYGYFTKTTL
        MSAENYAMD+QFE VSRR+ GS+QRTLTIQS S SL P PS+ LLRP G TT N+R    AA++ +  IPRNPSS+SQIVRPK++QPRPPI GYFTKTT+
Subjt:  MSAENYAMDIQFETVSRRQPGSSQRTLTIQSGSPSL-PTPSSTLLRPFGNTTRNRRPVK-AAAAPKPTIPRNPSSFSQIVRPKVYQPRPPIYGYFTKTTL

Query:  VDSTIESEFDGPSVQEVCSQIFPHGFNFLPEDLQKTRTYYEFILVDSKSAEITHIPDRNDPSRTIYSKLKIFRILTPSSWKQGMFVGKKLTATFQPQTYN
        VD TIE EFDGPSVQEVCSQIFPHGFNFLPEDL KTRT+YE+ILVDSKSAEITH+PD+NDPS+ IYSKL+IFR+LTPS WKQGMFVG+K +  F+P +YN
Subjt:  VDSTIESEFDGPSVQEVCSQIFPHGFNFLPEDLQKTRTYYEFILVDSKSAEITHIPDRNDPSRTIYSKLKIFRILTPSSWKQGMFVGKKLTATFQPQTYN

Query:  YLDYMKVWYIVFWLQCYNHSWFVTFCKQAYKSHFPNWFQTWWTYFGLSEEILLVEVRRSYHLFQQSIYLSPLSKTFRFALYFQIPWIFCWNFQLGPSGNF
        Y DY K WYIVFWLQ YNHSWFVTFCKQAYK HFPNWFQ WW YFGLSEEI  VEV+RSYHLFQQSIY SPLSKTFRFALYFQIPWIFCWNFQLGPSGNF
Subjt:  YLDYMKVWYIVFWLQCYNHSWFVTFCKQAYKSHFPNWFQTWWTYFGLSEEILLVEVRRSYHLFQQSIYLSPLSKTFRFALYFQIPWIFCWNFQLGPSGNF

Query:  KALSKALRIKWWEKFDYFYLESDKMKDWLKTNVHLQDMTRQEDESFLLAKNAVMSSLAGAGSQADFNSILNTVAVQISDPDDVQTDVDSSASINNDAVDD
        KALSK+LRIKWWEKF+Y +LE +K+KDW K N+HLQDMTRQEDE+FLL KNAVMS+LAGA +Q +FNS++N V V +SD +D   +  S AS+NN  VDD
Subjt:  KALSKALRIKWWEKFDYFYLESDKMKDWLKTNVHLQDMTRQEDESFLLAKNAVMSSLAGAGSQADFNSILNTVAVQISDPDDVQTDVDSSASINNDAVDD

Query:  EEYFDPFEGYDINDPYLDSQP
         +Y DP+EG DINDP+LD+QP
Subjt:  EEYFDPFEGYDINDPYLDSQP

KAA0063832.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa]3.0e-18175.3Show/hide
Query:  MSAENYAMDIQFETVSRRQPGSSQRTLTIQSGSPSL-PTPSSTLLRPFGNTTRNRRPVK-AAAAPKPTIPRNPSSFSQIVRPKVYQPRPPIYGYFTKTTL
        MSAENYAMD+QFE VSRR+ GS+QRTLTIQS S SL P PS+ LLRP G TT N+R    AA++ +  IPRNPSS+SQIVRPK++QPRPPI GYFTKTT+
Subjt:  MSAENYAMDIQFETVSRRQPGSSQRTLTIQSGSPSL-PTPSSTLLRPFGNTTRNRRPVK-AAAAPKPTIPRNPSSFSQIVRPKVYQPRPPIYGYFTKTTL

Query:  VDSTIESEFDGPSVQEVCSQIFPHGFNFLPEDLQKTRTYYEFILVDSKSAEITHIPDRNDPSRTIYSKLKIFRILTPSSWKQGMFVGKKLTATFQPQTYN
        VD TIE EFDGPSVQEVCSQIFPHGFNFLPEDL KTRT+YE+ILVDSKSAEITH+PD+NDPS+ IYSKL+IFR+LTPS WKQGMFVG+K +  F+P +YN
Subjt:  VDSTIESEFDGPSVQEVCSQIFPHGFNFLPEDLQKTRTYYEFILVDSKSAEITHIPDRNDPSRTIYSKLKIFRILTPSSWKQGMFVGKKLTATFQPQTYN

Query:  YLDYMKVWYIVFWLQCYNHSWFVTFCKQAYKSHFPNWFQTWWTYFGLSEEILLVEVRRSYHLFQQSIYLSPLSKTFRFALYFQIPWIFCWNFQLGPSGNF
        Y DY K WYIVFWLQ YNHSWFVTFCKQAYK HFPNWFQ WW YFGLSEEI  VEV+RSYHLFQQSIY SPLSKTFRFALYFQIPWIFCWNFQLGPSGNF
Subjt:  YLDYMKVWYIVFWLQCYNHSWFVTFCKQAYKSHFPNWFQTWWTYFGLSEEILLVEVRRSYHLFQQSIYLSPLSKTFRFALYFQIPWIFCWNFQLGPSGNF

Query:  KALSKALRIKWWEKFDYFYLESDKMKDWLKTNVHLQDMTRQEDESFLLAKNAVMSSLAGAGSQADFNSILNTVAVQISDPDDVQTDVDSSASINNDAVDD
        KALSK+LRIKWWEKF+Y +LE +K+KDW K N+HLQDMTRQEDE+FLL KNAVMS+LAGA +Q +FNS++N V V +SD +D   +  S AS+NN   DD
Subjt:  KALSKALRIKWWEKFDYFYLESDKMKDWLKTNVHLQDMTRQEDESFLLAKNAVMSSLAGAGSQADFNSILNTVAVQISDPDDVQTDVDSSASINNDAVDD

Query:  EEYFDPFEGYDINDPYLDSQP
         +Y DP+EG DINDP+LD+QP
Subjt:  EEYFDPFEGYDINDPYLDSQP

KAA0068172.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa]3.0e-18175.3Show/hide
Query:  MSAENYAMDIQFETVSRRQPGSSQRTLTIQSGSPSL-PTPSSTLLRPFGNTTRNRRPVK-AAAAPKPTIPRNPSSFSQIVRPKVYQPRPPIYGYFTKTTL
        MSAENYAMD+QFE VSRR+ GS+QRTLTIQS S SL P PS+ LLRP G TT N+R    AA++ +  IPRNPSS+SQIVRPK++QPRPPI GYFTKTT+
Subjt:  MSAENYAMDIQFETVSRRQPGSSQRTLTIQSGSPSL-PTPSSTLLRPFGNTTRNRRPVK-AAAAPKPTIPRNPSSFSQIVRPKVYQPRPPIYGYFTKTTL

Query:  VDSTIESEFDGPSVQEVCSQIFPHGFNFLPEDLQKTRTYYEFILVDSKSAEITHIPDRNDPSRTIYSKLKIFRILTPSSWKQGMFVGKKLTATFQPQTYN
        VD TIE +FDGPSVQEVCSQIFPHGFNFLPEDL KTRT+YE+ILVDSKSAEITH+PD+NDPS+ IYSKL+IFR+LTPS WKQGMFVG+K +  F+P +YN
Subjt:  VDSTIESEFDGPSVQEVCSQIFPHGFNFLPEDLQKTRTYYEFILVDSKSAEITHIPDRNDPSRTIYSKLKIFRILTPSSWKQGMFVGKKLTATFQPQTYN

Query:  YLDYMKVWYIVFWLQCYNHSWFVTFCKQAYKSHFPNWFQTWWTYFGLSEEILLVEVRRSYHLFQQSIYLSPLSKTFRFALYFQIPWIFCWNFQLGPSGNF
        Y DY K WYIVFWLQ YNHSWFVTFCKQAYK HFPNWFQ WW YFGLSEEI  VEV+RSYHLFQQSIY SPLSKTFRFALYFQIPWIFCWNFQLGPSGNF
Subjt:  YLDYMKVWYIVFWLQCYNHSWFVTFCKQAYKSHFPNWFQTWWTYFGLSEEILLVEVRRSYHLFQQSIYLSPLSKTFRFALYFQIPWIFCWNFQLGPSGNF

Query:  KALSKALRIKWWEKFDYFYLESDKMKDWLKTNVHLQDMTRQEDESFLLAKNAVMSSLAGAGSQADFNSILNTVAVQISDPDDVQTDVDSSASINNDAVDD
        KALSK+LRIKWWEKF+Y +LE +K+KDW K N+HLQDMTRQEDE+FLL KNAVMS+LAGA +Q +FNS++N V V +SD +D   +  S AS+NN  VDD
Subjt:  KALSKALRIKWWEKFDYFYLESDKMKDWLKTNVHLQDMTRQEDESFLLAKNAVMSSLAGAGSQADFNSILNTVAVQISDPDDVQTDVDSSASINNDAVDD

Query:  EEYFDPFEGYDINDPYLDSQP
         +Y DP+EG DINDP+LD+QP
Subjt:  EEYFDPFEGYDINDPYLDSQP

TYK28077.1 polyprotein [Cucumis melo var. makuwa]6.2e-17974.35Show/hide
Query:  MSAENYAMDIQFETVSRRQPGSSQRTLTIQSGSPSL-PTPSSTLLRPFGNTTRNRRPVKA-AAAPKPTIPRNPSSFSQIVRPKVYQPRPPIYGYFTKTTL
        MSAENYAMD+QFE VSRR+ GS+QRTLTIQS S SL P PS+ LLRP G TT N R     A++ +  IPRNPSS+SQIVRPK++QPRPPI GYFTKTT+
Subjt:  MSAENYAMDIQFETVSRRQPGSSQRTLTIQSGSPSL-PTPSSTLLRPFGNTTRNRRPVKA-AAAPKPTIPRNPSSFSQIVRPKVYQPRPPIYGYFTKTTL

Query:  VDSTIESEFDGPSVQEVCSQIFPHGFNFLPEDLQKTRTYYEFILVDSKSAEITHIPDRNDPSRTIYSKLKIFRILTPSSWKQGMFVGKKLTATFQPQTYN
        VD TIE EFDGPSVQEVCSQIFPHGFNFLPEDL KTRT+YE+ILVDSKSAEITH+PD+NDPS+ IYSKL+IFR+LTPS WKQGMFVG+K +  F+P +YN
Subjt:  VDSTIESEFDGPSVQEVCSQIFPHGFNFLPEDLQKTRTYYEFILVDSKSAEITHIPDRNDPSRTIYSKLKIFRILTPSSWKQGMFVGKKLTATFQPQTYN

Query:  YLDYMKVWYIVFWLQCYNHSWFVTFCKQAYKSHFPNWFQTWWTYFGLSEEILLVEVRRSYHLFQQSIYLSPLSKTFRFALYFQIPWIFCWNFQLGPSGNF
        Y DY K WYIVFWL  YNHSWFVTFCKQAYK HFPNWFQ WW YFGLSEEI  VE++RSYHLFQQSIY SPLSKTFRFALYFQIPWIFCWNFQLGPSGNF
Subjt:  YLDYMKVWYIVFWLQCYNHSWFVTFCKQAYKSHFPNWFQTWWTYFGLSEEILLVEVRRSYHLFQQSIYLSPLSKTFRFALYFQIPWIFCWNFQLGPSGNF

Query:  KALSKALRIKWWEKFDYFYLESDKMKDWLKTNVHLQDMTRQEDESFLLAKNAVMSSLAGAGSQADFNSILNTVAVQISDPDDVQTDVDSSASINNDAVDD
        KALSK+L IKWWEKF+Y +LE +K+KDW K N+HLQDMTRQEDE+FLL KNAVMS+LAGA +Q +FNS++N V V +SD +D   +  S AS+N+  VDD
Subjt:  KALSKALRIKWWEKFDYFYLESDKMKDWLKTNVHLQDMTRQEDESFLLAKNAVMSSLAGAGSQADFNSILNTVAVQISDPDDVQTDVDSSASINNDAVDD

Query:  EEYFDPFEGYDINDPYLDSQP
         +Y DP+EG DINDP+LD+QP
Subjt:  EEYFDPFEGYDINDPYLDSQP

TrEMBL top hitse value%identityAlignment
A0A5A7SS94 Retrotransposable element Tf21.5e-17874.11Show/hide
Query:  MSAENYAMDIQFETVSRRQPGSSQRTLTIQSGSPSL-PTPSSTLLRPFGNTTRNRRPVKA-AAAPKPTIPRNPSSFSQIVRPKVYQPRPPIYGYFTKTTL
        MSAENYAMD+QFE VSRR+ GS+QRTLTIQS S SL P PS+ LLRP G TT N R     A++ +  IPRNPSS+SQIVRPK++QPRPPI GYFT TT+
Subjt:  MSAENYAMDIQFETVSRRQPGSSQRTLTIQSGSPSL-PTPSSTLLRPFGNTTRNRRPVKA-AAAPKPTIPRNPSSFSQIVRPKVYQPRPPIYGYFTKTTL

Query:  VDSTIESEFDGPSVQEVCSQIFPHGFNFLPEDLQKTRTYYEFILVDSKSAEITHIPDRNDPSRTIYSKLKIFRILTPSSWKQGMFVGKKLTATFQPQTYN
        VD TIE EFDGPSVQEVCSQIFPHGFNFLPEDL KTRT+YE+ILVDSKSAEITH+PD+NDPS+ IYSKL+IFR+LTPS WKQGMFVG+K +  F+P +YN
Subjt:  VDSTIESEFDGPSVQEVCSQIFPHGFNFLPEDLQKTRTYYEFILVDSKSAEITHIPDRNDPSRTIYSKLKIFRILTPSSWKQGMFVGKKLTATFQPQTYN

Query:  YLDYMKVWYIVFWLQCYNHSWFVTFCKQAYKSHFPNWFQTWWTYFGLSEEILLVEVRRSYHLFQQSIYLSPLSKTFRFALYFQIPWIFCWNFQLGPSGNF
        Y DY K WYIVFWL  YNHSWFVTFCKQAYK HFPNWFQ WW YFGLSEEI  VE++RSYHLFQQSIY SPLSKTFRFALYFQIPWIFCWNFQLGPSGNF
Subjt:  YLDYMKVWYIVFWLQCYNHSWFVTFCKQAYKSHFPNWFQTWWTYFGLSEEILLVEVRRSYHLFQQSIYLSPLSKTFRFALYFQIPWIFCWNFQLGPSGNF

Query:  KALSKALRIKWWEKFDYFYLESDKMKDWLKTNVHLQDMTRQEDESFLLAKNAVMSSLAGAGSQADFNSILNTVAVQISDPDDVQTDVDSSASINNDAVDD
        KALSK+LRIKWWEKF+Y +LE +K+KDW K N+HLQDMT QEDE+FLL KNAVMS+LAGA +Q +FNS++N V V +SD +D   +  S AS+N+  VDD
Subjt:  KALSKALRIKWWEKFDYFYLESDKMKDWLKTNVHLQDMTRQEDESFLLAKNAVMSSLAGAGSQADFNSILNTVAVQISDPDDVQTDVDSSASINNDAVDD

Query:  EEYFDPFEGYDINDPYLDSQP
         +Y DP+EG DINDP+LD+QP
Subjt:  EEYFDPFEGYDINDPYLDSQP

A0A5A7UVN1 Retrotransposable element Tf25.0e-18275.53Show/hide
Query:  MSAENYAMDIQFETVSRRQPGSSQRTLTIQSGSPSL-PTPSSTLLRPFGNTTRNRRPVK-AAAAPKPTIPRNPSSFSQIVRPKVYQPRPPIYGYFTKTTL
        MSAENYAMD+QFE VSRR+ GS+QRTLTIQS S SL P PS+ LLRP G TT N+R    AA++ +  IPRNPSS+SQIVRPK++QPRPPI GYFTKTT+
Subjt:  MSAENYAMDIQFETVSRRQPGSSQRTLTIQSGSPSL-PTPSSTLLRPFGNTTRNRRPVK-AAAAPKPTIPRNPSSFSQIVRPKVYQPRPPIYGYFTKTTL

Query:  VDSTIESEFDGPSVQEVCSQIFPHGFNFLPEDLQKTRTYYEFILVDSKSAEITHIPDRNDPSRTIYSKLKIFRILTPSSWKQGMFVGKKLTATFQPQTYN
        VD TIE EFDGPSVQEVCSQIFPHGFNFLPEDL KTRT+YE+ILVDSKSAEITH+PD+NDPS+ IYSKL+IFR+LTPS WKQGMFVG+K +  F+P +YN
Subjt:  VDSTIESEFDGPSVQEVCSQIFPHGFNFLPEDLQKTRTYYEFILVDSKSAEITHIPDRNDPSRTIYSKLKIFRILTPSSWKQGMFVGKKLTATFQPQTYN

Query:  YLDYMKVWYIVFWLQCYNHSWFVTFCKQAYKSHFPNWFQTWWTYFGLSEEILLVEVRRSYHLFQQSIYLSPLSKTFRFALYFQIPWIFCWNFQLGPSGNF
        Y DY K WYIVFWLQ YNHSWFVTFCKQAYK HFPNWFQ WW YFGLSEEI  VEV+RSYHLFQQSIY SPLSKTFRFALYFQIPWIFCWNFQLGPSGNF
Subjt:  YLDYMKVWYIVFWLQCYNHSWFVTFCKQAYKSHFPNWFQTWWTYFGLSEEILLVEVRRSYHLFQQSIYLSPLSKTFRFALYFQIPWIFCWNFQLGPSGNF

Query:  KALSKALRIKWWEKFDYFYLESDKMKDWLKTNVHLQDMTRQEDESFLLAKNAVMSSLAGAGSQADFNSILNTVAVQISDPDDVQTDVDSSASINNDAVDD
        KALSK+LRIKWWEKF+Y +LE +K+KDW K N+HLQDMTRQEDE+FLL KNAVMS+LAGA +Q +FNS++N V V +SD +D   +  S AS+NN  VDD
Subjt:  KALSKALRIKWWEKFDYFYLESDKMKDWLKTNVHLQDMTRQEDESFLLAKNAVMSSLAGAGSQADFNSILNTVAVQISDPDDVQTDVDSSASINNDAVDD

Query:  EEYFDPFEGYDINDPYLDSQP
         +Y DP+EG DINDP+LD+QP
Subjt:  EEYFDPFEGYDINDPYLDSQP

A0A5A7V6D1 Retrotransposable element Tf21.4e-18175.3Show/hide
Query:  MSAENYAMDIQFETVSRRQPGSSQRTLTIQSGSPSL-PTPSSTLLRPFGNTTRNRRPVK-AAAAPKPTIPRNPSSFSQIVRPKVYQPRPPIYGYFTKTTL
        MSAENYAMD+QFE VSRR+ GS+QRTLTIQS S SL P PS+ LLRP G TT N+R    AA++ +  IPRNPSS+SQIVRPK++QPRPPI GYFTKTT+
Subjt:  MSAENYAMDIQFETVSRRQPGSSQRTLTIQSGSPSL-PTPSSTLLRPFGNTTRNRRPVK-AAAAPKPTIPRNPSSFSQIVRPKVYQPRPPIYGYFTKTTL

Query:  VDSTIESEFDGPSVQEVCSQIFPHGFNFLPEDLQKTRTYYEFILVDSKSAEITHIPDRNDPSRTIYSKLKIFRILTPSSWKQGMFVGKKLTATFQPQTYN
        VD TIE EFDGPSVQEVCSQIFPHGFNFLPEDL KTRT+YE+ILVDSKSAEITH+PD+NDPS+ IYSKL+IFR+LTPS WKQGMFVG+K +  F+P +YN
Subjt:  VDSTIESEFDGPSVQEVCSQIFPHGFNFLPEDLQKTRTYYEFILVDSKSAEITHIPDRNDPSRTIYSKLKIFRILTPSSWKQGMFVGKKLTATFQPQTYN

Query:  YLDYMKVWYIVFWLQCYNHSWFVTFCKQAYKSHFPNWFQTWWTYFGLSEEILLVEVRRSYHLFQQSIYLSPLSKTFRFALYFQIPWIFCWNFQLGPSGNF
        Y DY K WYIVFWLQ YNHSWFVTFCKQAYK HFPNWFQ WW YFGLSEEI  VEV+RSYHLFQQSIY SPLSKTFRFALYFQIPWIFCWNFQLGPSGNF
Subjt:  YLDYMKVWYIVFWLQCYNHSWFVTFCKQAYKSHFPNWFQTWWTYFGLSEEILLVEVRRSYHLFQQSIYLSPLSKTFRFALYFQIPWIFCWNFQLGPSGNF

Query:  KALSKALRIKWWEKFDYFYLESDKMKDWLKTNVHLQDMTRQEDESFLLAKNAVMSSLAGAGSQADFNSILNTVAVQISDPDDVQTDVDSSASINNDAVDD
        KALSK+LRIKWWEKF+Y +LE +K+KDW K N+HLQDMTRQEDE+FLL KNAVMS+LAGA +Q +FNS++N V V +SD +D   +  S AS+NN   DD
Subjt:  KALSKALRIKWWEKFDYFYLESDKMKDWLKTNVHLQDMTRQEDESFLLAKNAVMSSLAGAGSQADFNSILNTVAVQISDPDDVQTDVDSSASINNDAVDD

Query:  EEYFDPFEGYDINDPYLDSQP
         +Y DP+EG DINDP+LD+QP
Subjt:  EEYFDPFEGYDINDPYLDSQP

A0A5A7VIK9 Retrotransposable element Tf21.4e-18175.3Show/hide
Query:  MSAENYAMDIQFETVSRRQPGSSQRTLTIQSGSPSL-PTPSSTLLRPFGNTTRNRRPVK-AAAAPKPTIPRNPSSFSQIVRPKVYQPRPPIYGYFTKTTL
        MSAENYAMD+QFE VSRR+ GS+QRTLTIQS S SL P PS+ LLRP G TT N+R    AA++ +  IPRNPSS+SQIVRPK++QPRPPI GYFTKTT+
Subjt:  MSAENYAMDIQFETVSRRQPGSSQRTLTIQSGSPSL-PTPSSTLLRPFGNTTRNRRPVK-AAAAPKPTIPRNPSSFSQIVRPKVYQPRPPIYGYFTKTTL

Query:  VDSTIESEFDGPSVQEVCSQIFPHGFNFLPEDLQKTRTYYEFILVDSKSAEITHIPDRNDPSRTIYSKLKIFRILTPSSWKQGMFVGKKLTATFQPQTYN
        VD TIE +FDGPSVQEVCSQIFPHGFNFLPEDL KTRT+YE+ILVDSKSAEITH+PD+NDPS+ IYSKL+IFR+LTPS WKQGMFVG+K +  F+P +YN
Subjt:  VDSTIESEFDGPSVQEVCSQIFPHGFNFLPEDLQKTRTYYEFILVDSKSAEITHIPDRNDPSRTIYSKLKIFRILTPSSWKQGMFVGKKLTATFQPQTYN

Query:  YLDYMKVWYIVFWLQCYNHSWFVTFCKQAYKSHFPNWFQTWWTYFGLSEEILLVEVRRSYHLFQQSIYLSPLSKTFRFALYFQIPWIFCWNFQLGPSGNF
        Y DY K WYIVFWLQ YNHSWFVTFCKQAYK HFPNWFQ WW YFGLSEEI  VEV+RSYHLFQQSIY SPLSKTFRFALYFQIPWIFCWNFQLGPSGNF
Subjt:  YLDYMKVWYIVFWLQCYNHSWFVTFCKQAYKSHFPNWFQTWWTYFGLSEEILLVEVRRSYHLFQQSIYLSPLSKTFRFALYFQIPWIFCWNFQLGPSGNF

Query:  KALSKALRIKWWEKFDYFYLESDKMKDWLKTNVHLQDMTRQEDESFLLAKNAVMSSLAGAGSQADFNSILNTVAVQISDPDDVQTDVDSSASINNDAVDD
        KALSK+LRIKWWEKF+Y +LE +K+KDW K N+HLQDMTRQEDE+FLL KNAVMS+LAGA +Q +FNS++N V V +SD +D   +  S AS+NN  VDD
Subjt:  KALSKALRIKWWEKFDYFYLESDKMKDWLKTNVHLQDMTRQEDESFLLAKNAVMSSLAGAGSQADFNSILNTVAVQISDPDDVQTDVDSSASINNDAVDD

Query:  EEYFDPFEGYDINDPYLDSQP
         +Y DP+EG DINDP+LD+QP
Subjt:  EEYFDPFEGYDINDPYLDSQP

A0A5D3DW87 Polyprotein3.0e-17974.35Show/hide
Query:  MSAENYAMDIQFETVSRRQPGSSQRTLTIQSGSPSL-PTPSSTLLRPFGNTTRNRRPVKA-AAAPKPTIPRNPSSFSQIVRPKVYQPRPPIYGYFTKTTL
        MSAENYAMD+QFE VSRR+ GS+QRTLTIQS S SL P PS+ LLRP G TT N R     A++ +  IPRNPSS+SQIVRPK++QPRPPI GYFTKTT+
Subjt:  MSAENYAMDIQFETVSRRQPGSSQRTLTIQSGSPSL-PTPSSTLLRPFGNTTRNRRPVKA-AAAPKPTIPRNPSSFSQIVRPKVYQPRPPIYGYFTKTTL

Query:  VDSTIESEFDGPSVQEVCSQIFPHGFNFLPEDLQKTRTYYEFILVDSKSAEITHIPDRNDPSRTIYSKLKIFRILTPSSWKQGMFVGKKLTATFQPQTYN
        VD TIE EFDGPSVQEVCSQIFPHGFNFLPEDL KTRT+YE+ILVDSKSAEITH+PD+NDPS+ IYSKL+IFR+LTPS WKQGMFVG+K +  F+P +YN
Subjt:  VDSTIESEFDGPSVQEVCSQIFPHGFNFLPEDLQKTRTYYEFILVDSKSAEITHIPDRNDPSRTIYSKLKIFRILTPSSWKQGMFVGKKLTATFQPQTYN

Query:  YLDYMKVWYIVFWLQCYNHSWFVTFCKQAYKSHFPNWFQTWWTYFGLSEEILLVEVRRSYHLFQQSIYLSPLSKTFRFALYFQIPWIFCWNFQLGPSGNF
        Y DY K WYIVFWL  YNHSWFVTFCKQAYK HFPNWFQ WW YFGLSEEI  VE++RSYHLFQQSIY SPLSKTFRFALYFQIPWIFCWNFQLGPSGNF
Subjt:  YLDYMKVWYIVFWLQCYNHSWFVTFCKQAYKSHFPNWFQTWWTYFGLSEEILLVEVRRSYHLFQQSIYLSPLSKTFRFALYFQIPWIFCWNFQLGPSGNF

Query:  KALSKALRIKWWEKFDYFYLESDKMKDWLKTNVHLQDMTRQEDESFLLAKNAVMSSLAGAGSQADFNSILNTVAVQISDPDDVQTDVDSSASINNDAVDD
        KALSK+L IKWWEKF+Y +LE +K+KDW K N+HLQDMTRQEDE+FLL KNAVMS+LAGA +Q +FNS++N V V +SD +D   +  S AS+N+  VDD
Subjt:  KALSKALRIKWWEKFDYFYLESDKMKDWLKTNVHLQDMTRQEDESFLLAKNAVMSSLAGAGSQADFNSILNTVAVQISDPDDVQTDVDSSASINNDAVDD

Query:  EEYFDPFEGYDINDPYLDSQP
         +Y DP+EG DINDP+LD+QP
Subjt:  EEYFDPFEGYDINDPYLDSQP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGCAGAGAATTATGCCATGGATATCCAGTTTGAAACGGTATCCAGGCGCCAGCCAGGTTCTTCCCAGAGAACCTTGACTATCCAATCAGGCTCTCCGAGCCTTCC
AACTCCCTCAAGTACGTTGTTACGCCCCTTCGGCAATACAACGAGAAACAGGCGCCCTGTTAAGGCAGCAGCAGCTCCAAAACCTACGATTCCGAGGAATCCTTCCTCGT
TTTCTCAAATCGTCAGGCCAAAGGTTTACCAGCCCAGGCCGCCAATTTATGGTTATTTCACCAAAACAACCCTGGTGGACTCAACCATTGAATCAGAGTTCGACGGACCT
TCGGTCCAAGAAGTCTGTAGTCAAATATTTCCTCATGGCTTTAACTTCCTGCCAGAGGATCTTCAAAAGACCCGAACTTATTATGAGTTTATTCTGGTAGATTCAAAATC
TGCAGAGATAACTCATATTCCAGACAGAAATGATCCTTCTAGGACCATTTACTCAAAACTCAAGATCTTCCGCATCCTTACCCCTTCCTCCTGGAAACAGGGTATGTTTG
TAGGGAAGAAACTGACGGCAACCTTTCAACCTCAGACATACAACTACCTCGACTACATGAAAGTGTGGTACATTGTTTTCTGGTTGCAATGTTACAACCACTCTTGGTTT
GTGACTTTTTGTAAGCAAGCTTACAAATCGCACTTTCCAAATTGGTTTCAAACTTGGTGGACATATTTTGGACTGTCCGAGGAAATTCTTCTGGTGGAAGTTCGGAGATC
GTACCACCTGTTCCAACAAAGTATCTATTTGTCTCCCCTCTCTAAGACGTTTAGATTTGCTTTGTATTTTCAAATACCATGGATCTTTTGCTGGAATTTCCAGCTAGGAC
CCAGTGGAAACTTCAAAGCGTTGAGCAAAGCTTTACGCATCAAATGGTGGGAAAAATTCGATTATTTCTACCTAGAATCTGACAAGATGAAGGATTGGTTGAAAACCAAC
GTTCATCTTCAAGACATGACAAGGCAAGAAGATGAGAGCTTCCTTCTGGCCAAGAATGCTGTCATGAGCTCGCTAGCTGGGGCCGGATCCCAAGCCGACTTCAACTCAAT
ACTCAACACAGTCGCGGTTCAGATCTCTGATCCAGACGACGTTCAGACAGACGTTGACTCTTCCGCCTCTATCAACAATGATGCCGTAGACGACGAAGAATACTTCGATC
CCTTCGAAGGATACGACATCAACGACCCATATCTAGATTCACAGCCTAGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTGCAGAGAATTATGCCATGGATATCCAGTTTGAAACGGTATCCAGGCGCCAGCCAGGTTCTTCCCAGAGAACCTTGACTATCCAATCAGGCTCTCCGAGCCTTCC
AACTCCCTCAAGTACGTTGTTACGCCCCTTCGGCAATACAACGAGAAACAGGCGCCCTGTTAAGGCAGCAGCAGCTCCAAAACCTACGATTCCGAGGAATCCTTCCTCGT
TTTCTCAAATCGTCAGGCCAAAGGTTTACCAGCCCAGGCCGCCAATTTATGGTTATTTCACCAAAACAACCCTGGTGGACTCAACCATTGAATCAGAGTTCGACGGACCT
TCGGTCCAAGAAGTCTGTAGTCAAATATTTCCTCATGGCTTTAACTTCCTGCCAGAGGATCTTCAAAAGACCCGAACTTATTATGAGTTTATTCTGGTAGATTCAAAATC
TGCAGAGATAACTCATATTCCAGACAGAAATGATCCTTCTAGGACCATTTACTCAAAACTCAAGATCTTCCGCATCCTTACCCCTTCCTCCTGGAAACAGGGTATGTTTG
TAGGGAAGAAACTGACGGCAACCTTTCAACCTCAGACATACAACTACCTCGACTACATGAAAGTGTGGTACATTGTTTTCTGGTTGCAATGTTACAACCACTCTTGGTTT
GTGACTTTTTGTAAGCAAGCTTACAAATCGCACTTTCCAAATTGGTTTCAAACTTGGTGGACATATTTTGGACTGTCCGAGGAAATTCTTCTGGTGGAAGTTCGGAGATC
GTACCACCTGTTCCAACAAAGTATCTATTTGTCTCCCCTCTCTAAGACGTTTAGATTTGCTTTGTATTTTCAAATACCATGGATCTTTTGCTGGAATTTCCAGCTAGGAC
CCAGTGGAAACTTCAAAGCGTTGAGCAAAGCTTTACGCATCAAATGGTGGGAAAAATTCGATTATTTCTACCTAGAATCTGACAAGATGAAGGATTGGTTGAAAACCAAC
GTTCATCTTCAAGACATGACAAGGCAAGAAGATGAGAGCTTCCTTCTGGCCAAGAATGCTGTCATGAGCTCGCTAGCTGGGGCCGGATCCCAAGCCGACTTCAACTCAAT
ACTCAACACAGTCGCGGTTCAGATCTCTGATCCAGACGACGTTCAGACAGACGTTGACTCTTCCGCCTCTATCAACAATGATGCCGTAGACGACGAAGAATACTTCGATC
CCTTCGAAGGATACGACATCAACGACCCATATCTAGATTCACAGCCTAGCTGA
Protein sequenceShow/hide protein sequence
MSAENYAMDIQFETVSRRQPGSSQRTLTIQSGSPSLPTPSSTLLRPFGNTTRNRRPVKAAAAPKPTIPRNPSSFSQIVRPKVYQPRPPIYGYFTKTTLVDSTIESEFDGP
SVQEVCSQIFPHGFNFLPEDLQKTRTYYEFILVDSKSAEITHIPDRNDPSRTIYSKLKIFRILTPSSWKQGMFVGKKLTATFQPQTYNYLDYMKVWYIVFWLQCYNHSWF
VTFCKQAYKSHFPNWFQTWWTYFGLSEEILLVEVRRSYHLFQQSIYLSPLSKTFRFALYFQIPWIFCWNFQLGPSGNFKALSKALRIKWWEKFDYFYLESDKMKDWLKTN
VHLQDMTRQEDESFLLAKNAVMSSLAGAGSQADFNSILNTVAVQISDPDDVQTDVDSSASINNDAVDDEEYFDPFEGYDINDPYLDSQPS