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Moc03g02410 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g02410
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionPMD domain-containing protein
Genome locationchr3:1810878..1812283
RNA-Seq ExpressionMoc03g02410
SyntenyMoc03g02410
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046606.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]4.8e-3542.44Show/hide
Query:  FLENQLDILKRLWEGLRLDRKTQFIKKYGHIAQLRYVRVNFSVLRALVRHWDPTYRCFTFSSMDITPTIEEYHTLLQIPPQEKIEIYFYDGGFMLKRAVS
        F+ N L+ LK LWE L  +++ +F K YG I  L Y  +N S L+AL   WDP  +CFTF++ D+TPTIEEY  L+ +P      +Y YD    L+R++S
Subjt:  FLENQLDILKRLWEGLRLDRKTQFIKKYGHIAQLRYVRVNFSVLRALVRHWDPTYRCFTFSSMDITPTIEEYHTLLQIPPQEKIEIYFYDGGFMLKRAVS

Query:  LLVGKMYAGEIEKNVKRKGENTCLLIEYVLSLQQRFLNEERELSLLALCLFNLVLFPKVSGYVEEWVIKLFV
          +G ++A E++K +K K    C+ I Y+++L +  L  +  LSL+ALC++  V+FP++ GYVEE V+K+FV
Subjt:  LLVGKMYAGEIEKNVKRKGENTCLLIEYVLSLQQRFLNEERELSLLALCLFNLVLFPKVSGYVEEWVIKLFV

KAA0060423.1 uncharacterized protein E6C27_scaffold22G002420 [Cucumis melo var. makuwa]2.6e-3642.62Show/hide
Query:  SQNVVMPFQNVTFLENQLDILKRLWEGLRLDRKTQFIKKYGHIAQLRYVRVNFSVLRALVRHWDPTYRCFTFSSMDITPTIEEYHTLLQIPPQEKIEIYF
        SQ  V+    ++F +N L  LK +WE L   R+  F KKYGHI +L Y+ VN+  LRA++  WDP Y CFTF S D+ PTIEEY  +L +P +E+  +YF
Subjt:  SQNVVMPFQNVTFLENQLDILKRLWEGLRLDRKTQFIKKYGHIAQLRYVRVNFSVLRALVRHWDPTYRCFTFSSMDITPTIEEYHTLLQIPPQEKIEIYF

Query:  YDGGFMLKRAVSLLVGKMYAGEIEKNVKRKGENTCLLIEYVLSLQQRFLNEERELSLLALCLFNLVLFPKVSGYVEEWVIKLF
        ++     KR +S  +  ++A EI+K +K KG    +  +Y++ + Q +++E++ L+LLALC++  V+FPK  GYV+  VIKLF
Subjt:  YDGGFMLKRAVSLLVGKMYAGEIEKNVKRKGENTCLLIEYVLSLQQRFLNEERELSLLALCLFNLVLFPKVSGYVEEWVIKLF

KAA0066094.1 girdin-like [Cucumis melo var. makuwa]2.0e-3631.52Show/hide
Query:  SQNVVMPFQNVTFLENQLDILKRLWEGLRLDRKTQFIKKYGHIAQLRYVRVNFSVLRALVRHWDPTYRCFTFSSMDITPTIEEYHTLLQIPPQEKIEIYF
        SQ  V+    ++F +N L  LK +WE L   R+  F KKYGHIA+L Y+ VN+  LRA++  WDP Y CFTF S D+ PTIEEY  +L +P +E+  +YF
Subjt:  SQNVVMPFQNVTFLENQLDILKRLWEGLRLDRKTQFIKKYGHIAQLRYVRVNFSVLRALVRHWDPTYRCFTFSSMDITPTIEEYHTLLQIPPQEKIEIYF

Query:  YDGGFMLKRAVSLLVGKMYAGEIEKNVKRKGENTCLLIEYVLSLQQRFLNEERELSLLALCLFNLVLFPKVSGYVE------------------------
        ++     KR +S  +  ++A +I+K +K KG    +  +Y++ + Q +++E++ L+LLALC++  V+FPK  GYV+                        
Subjt:  YDGGFMLKRAVSLLVGKMYAGEIEKNVKRKGENTCLLIEYVLSLQQRFLNEERELSLLALCLFNLVLFPKVSGYVE------------------------

Query:  --------EWVIKLFV----------------------KEVVKAWKAIARIQSGNYHDNIFEGYEKWHLSRGKTVV
                +  +K F+                      ++ V AWK+I +I+   +++ +  GYE W  +R K ++
Subjt:  --------EWVIKLFV----------------------KEVVKAWKAIARIQSGNYHDNIFEGYEKWHLSRGKTVV

XP_022147190.1 uncharacterized protein LOC111016201 [Momordica charantia]2.3e-10152.94Show/hide
Query:  ALSQNVVMPFQNVTFLENQLDILKRLWEGLRLDRKTQFIKKYGHIAQLRYVRVNFSVLRALVRHWDPTYRCFTFSSMDITPTIEEYHTLLQIPPQEKIEI
        ALSQNV+MPF NVTF ENQLD LKRLWEGLR DRKTQFIKKYGHIAQL YVRVNFSVLRALV+HWDP YRCFTFSSMDITPTIEEYHTLLQIP QEKIE+
Subjt:  ALSQNVVMPFQNVTFLENQLDILKRLWEGLRLDRKTQFIKKYGHIAQLRYVRVNFSVLRALVRHWDPTYRCFTFSSMDITPTIEEYHTLLQIPPQEKIEI

Query:  YFYDGGFMLKRAVSLLVGKMYAGEIEKNVKRKGENTCLLIEYVLSLQQRFLNEERELSLLALCLFNLVLFPKVSGYVEEWVIKLFVK-------------
        Y YDGGF LKRAVSLLVGK+ A EIEK+VKRKGENTCL IEY+ SLQ RF+NEERELSLLALCLFNLVLFP VS YVEE V+KLFVK             
Subjt:  YFYDGGFMLKRAVSLLVGKMYAGEIEKNVKRKGENTCLLIEYVLSLQQRFLNEERELSLLALCLFNLVLFPKVSGYVEEWVIKLFVK-------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ---------------------------------------------------------EVVKAWKAIARIQSGNYHDNIFEGYEKWHLSRGKTVVLLPTDK
                                                                 EVVKAWK I RIQSGNYHDNIFEGYEKWH SRGKTVVLLPTDK
Subjt:  ---------------------------------------------------------EVVKAWKAIARIQSGNYHDNIFEGYEKWHLSRGKTVVLLPTDK

Query:  GKGKLVVPTRRILSEMSPNQSTQWK
        GKGKL VPTRRILSEMSPNQSTQ K
Subjt:  GKGKLVVPTRRILSEMSPNQSTQWK

XP_022150759.1 uncharacterized protein LOC111018820 [Momordica charantia]7.4e-6044.86Show/hide
Query:  MDITPTIEEYHTLLQIPPQEKIEIYFYDGGFMLKRAVSLLVGKMYAGEIEKNVKRKGENTCLLIEYVLSLQQRFLNEERELSLLALCLFNLVLFPKVSGY
        M+ITPTI+EYHTLLQIP QEKIE+Y YDGGF LKRAVSLLVGK+ AGEIEK+VKRKGENTCL IEY+LSLQQRF+NEERELSLLALCLFNLVLFPKVSGY
Subjt:  MDITPTIEEYHTLLQIPPQEKIEIYFYDGGFMLKRAVSLLVGKMYAGEIEKNVKRKGENTCLLIEYVLSLQQRFLNEERELSLLALCLFNLVLFPKVSGY

Query:  VEEWVIKLFVK-----------------------------------------------------------------------------------------
        VEE ++KLFVK                                                                                         
Subjt:  VEEWVIKLFVK-----------------------------------------------------------------------------------------

Query:  ---------------------------------------------------------------------------------EVVKAWKAIARIQSGNYHD
                                                                                         EVVKAWKAI RIQSGNYHD
Subjt:  ---------------------------------------------------------------------------------EVVKAWKAIARIQSGNYHD

Query:  NIFEGYEKWHLSRGKTVVLLPTDKGKGKLVVPTRRILSEMSPNQSTQWKV
        NIFEGYE+WH SRGKTVVLL TDKGKGKL VPT  ILSEMSPNQSTQ KV
Subjt:  NIFEGYEKWHLSRGKTVVLLPTDKGKGKLVVPTRRILSEMSPNQSTQWKV

TrEMBL top hitse value%identityAlignment
A0A5A7TXA1 Glial fibrillary acidic protein-like2.3e-3542.44Show/hide
Query:  FLENQLDILKRLWEGLRLDRKTQFIKKYGHIAQLRYVRVNFSVLRALVRHWDPTYRCFTFSSMDITPTIEEYHTLLQIPPQEKIEIYFYDGGFMLKRAVS
        F+ N L+ LK LWE L  +++ +F K YG I  L Y  +N S L+AL   WDP  +CFTF++ D+TPTIEEY  L+ +P      +Y YD    L+R++S
Subjt:  FLENQLDILKRLWEGLRLDRKTQFIKKYGHIAQLRYVRVNFSVLRALVRHWDPTYRCFTFSSMDITPTIEEYHTLLQIPPQEKIEIYFYDGGFMLKRAVS

Query:  LLVGKMYAGEIEKNVKRKGENTCLLIEYVLSLQQRFLNEERELSLLALCLFNLVLFPKVSGYVEEWVIKLFV
          +G ++A E++K +K K    C+ I Y+++L +  L  +  LSL+ALC++  V+FP++ GYVEE V+K+FV
Subjt:  LLVGKMYAGEIEKNVKRKGENTCLLIEYVLSLQQRFLNEERELSLLALCLFNLVLFPKVSGYVEEWVIKLFV

A0A5A7UWQ6 Uncharacterized protein1.2e-3642.62Show/hide
Query:  SQNVVMPFQNVTFLENQLDILKRLWEGLRLDRKTQFIKKYGHIAQLRYVRVNFSVLRALVRHWDPTYRCFTFSSMDITPTIEEYHTLLQIPPQEKIEIYF
        SQ  V+    ++F +N L  LK +WE L   R+  F KKYGHI +L Y+ VN+  LRA++  WDP Y CFTF S D+ PTIEEY  +L +P +E+  +YF
Subjt:  SQNVVMPFQNVTFLENQLDILKRLWEGLRLDRKTQFIKKYGHIAQLRYVRVNFSVLRALVRHWDPTYRCFTFSSMDITPTIEEYHTLLQIPPQEKIEIYF

Query:  YDGGFMLKRAVSLLVGKMYAGEIEKNVKRKGENTCLLIEYVLSLQQRFLNEERELSLLALCLFNLVLFPKVSGYVEEWVIKLF
        ++     KR +S  +  ++A EI+K +K KG    +  +Y++ + Q +++E++ L+LLALC++  V+FPK  GYV+  VIKLF
Subjt:  YDGGFMLKRAVSLLVGKMYAGEIEKNVKRKGENTCLLIEYVLSLQQRFLNEERELSLLALCLFNLVLFPKVSGYVEEWVIKLF

A0A5A7VFL0 Girdin-like9.5e-3731.52Show/hide
Query:  SQNVVMPFQNVTFLENQLDILKRLWEGLRLDRKTQFIKKYGHIAQLRYVRVNFSVLRALVRHWDPTYRCFTFSSMDITPTIEEYHTLLQIPPQEKIEIYF
        SQ  V+    ++F +N L  LK +WE L   R+  F KKYGHIA+L Y+ VN+  LRA++  WDP Y CFTF S D+ PTIEEY  +L +P +E+  +YF
Subjt:  SQNVVMPFQNVTFLENQLDILKRLWEGLRLDRKTQFIKKYGHIAQLRYVRVNFSVLRALVRHWDPTYRCFTFSSMDITPTIEEYHTLLQIPPQEKIEIYF

Query:  YDGGFMLKRAVSLLVGKMYAGEIEKNVKRKGENTCLLIEYVLSLQQRFLNEERELSLLALCLFNLVLFPKVSGYVE------------------------
        ++     KR +S  +  ++A +I+K +K KG    +  +Y++ + Q +++E++ L+LLALC++  V+FPK  GYV+                        
Subjt:  YDGGFMLKRAVSLLVGKMYAGEIEKNVKRKGENTCLLIEYVLSLQQRFLNEERELSLLALCLFNLVLFPKVSGYVE------------------------

Query:  --------EWVIKLFV----------------------KEVVKAWKAIARIQSGNYHDNIFEGYEKWHLSRGKTVV
                +  +K F+                      ++ V AWK+I +I+   +++ +  GYE W  +R K ++
Subjt:  --------EWVIKLFV----------------------KEVVKAWKAIARIQSGNYHDNIFEGYEKWHLSRGKTVV

A0A6J1CZG4 uncharacterized protein LOC1110162011.1e-10152.94Show/hide
Query:  ALSQNVVMPFQNVTFLENQLDILKRLWEGLRLDRKTQFIKKYGHIAQLRYVRVNFSVLRALVRHWDPTYRCFTFSSMDITPTIEEYHTLLQIPPQEKIEI
        ALSQNV+MPF NVTF ENQLD LKRLWEGLR DRKTQFIKKYGHIAQL YVRVNFSVLRALV+HWDP YRCFTFSSMDITPTIEEYHTLLQIP QEKIE+
Subjt:  ALSQNVVMPFQNVTFLENQLDILKRLWEGLRLDRKTQFIKKYGHIAQLRYVRVNFSVLRALVRHWDPTYRCFTFSSMDITPTIEEYHTLLQIPPQEKIEI

Query:  YFYDGGFMLKRAVSLLVGKMYAGEIEKNVKRKGENTCLLIEYVLSLQQRFLNEERELSLLALCLFNLVLFPKVSGYVEEWVIKLFVK-------------
        Y YDGGF LKRAVSLLVGK+ A EIEK+VKRKGENTCL IEY+ SLQ RF+NEERELSLLALCLFNLVLFP VS YVEE V+KLFVK             
Subjt:  YFYDGGFMLKRAVSLLVGKMYAGEIEKNVKRKGENTCLLIEYVLSLQQRFLNEERELSLLALCLFNLVLFPKVSGYVEEWVIKLFVK-------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ---------------------------------------------------------EVVKAWKAIARIQSGNYHDNIFEGYEKWHLSRGKTVVLLPTDK
                                                                 EVVKAWK I RIQSGNYHDNIFEGYEKWH SRGKTVVLLPTDK
Subjt:  ---------------------------------------------------------EVVKAWKAIARIQSGNYHDNIFEGYEKWHLSRGKTVVLLPTDK

Query:  GKGKLVVPTRRILSEMSPNQSTQWK
        GKGKL VPTRRILSEMSPNQSTQ K
Subjt:  GKGKLVVPTRRILSEMSPNQSTQWK

A0A6J1DB13 uncharacterized protein LOC1110188203.6e-6044.86Show/hide
Query:  MDITPTIEEYHTLLQIPPQEKIEIYFYDGGFMLKRAVSLLVGKMYAGEIEKNVKRKGENTCLLIEYVLSLQQRFLNEERELSLLALCLFNLVLFPKVSGY
        M+ITPTI+EYHTLLQIP QEKIE+Y YDGGF LKRAVSLLVGK+ AGEIEK+VKRKGENTCL IEY+LSLQQRF+NEERELSLLALCLFNLVLFPKVSGY
Subjt:  MDITPTIEEYHTLLQIPPQEKIEIYFYDGGFMLKRAVSLLVGKMYAGEIEKNVKRKGENTCLLIEYVLSLQQRFLNEERELSLLALCLFNLVLFPKVSGY

Query:  VEEWVIKLFVK-----------------------------------------------------------------------------------------
        VEE ++KLFVK                                                                                         
Subjt:  VEEWVIKLFVK-----------------------------------------------------------------------------------------

Query:  ---------------------------------------------------------------------------------EVVKAWKAIARIQSGNYHD
                                                                                         EVVKAWKAI RIQSGNYHD
Subjt:  ---------------------------------------------------------------------------------EVVKAWKAIARIQSGNYHD

Query:  NIFEGYEKWHLSRGKTVVLLPTDKGKGKLVVPTRRILSEMSPNQSTQWKV
        NIFEGYE+WH SRGKTVVLL TDKGKGKL VPT  ILSEMSPNQSTQ KV
Subjt:  NIFEGYEKWHLSRGKTVVLLPTDKGKGKLVVPTRRILSEMSPNQSTQWKV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCAAAGAACATGCATTATCACAGAATGTCGTCATGCCATTTCAAAATGTAACGTTTTTAGAAAATCAGTTGGATATCTTAAAACGTTTATGGGAAGGTTTAAGACT
AGATAGAAAAACCCAATTCATAAAAAAATATGGCCACATAGCGCAGCTCCGGTACGTGCGAGTCAACTTCTCAGTGTTGAGAGCATTAGTTAGACATTGGGATCCGACCT
ATAGATGCTTTACTTTTAGCTCAATGGATATAACCCCAACTATCGAGGAATACCACACTCTCTTACAAATACCACCGCAAGAGAAAATTGAGATTTATTTCTATGATGGT
GGGTTTATGTTGAAAAGGGCAGTATCGCTGCTTGTAGGGAAGATGTATGCTGGTGAGATTGAAAAAAATGTGAAAAGGAAGGGAGAAAACACATGCTTGCTAATAGAATA
TGTCCTGAGTCTTCAACAGAGATTCCTTAATGAAGAAAGGGAGCTATCACTATTAGCTCTGTGCTTATTCAACTTGGTTTTATTCCCTAAAGTTAGTGGATACGTTGAAG
AGTGGGTGATCAAACTATTTGTCAAGGAGGTCGTAAAGGCATGGAAGGCGATTGCCAGAATCCAAAGTGGCAATTACCACGATAATATATTTGAAGGATACGAAAAGTGG
CATTTGAGTAGAGGAAAAACTGTGGTTCTCCTACCAACTGACAAGGGCAAAGGGAAGCTAGTGGTTCCCACTAGGAGAATTCTTTCTGAAATGAGCCCAAATCAGTCCAC
TCAGTGGAAGGTTCATAGGATAGATTACAAGCTGCGAGAAGGAACCCCACATCAGCTAAAGAAAGATTACAACTTGGGTTCAATCAAAATCTACCTCGAAGCATTGAGCT
GGAATTACAGTAGGCAAGAAGGGAGATCGGTTACCAAGGGAAAGAAAACAGACCGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTCAAAGAACATGCATTATCACAGAATGTCGTCATGCCATTTCAAAATGTAACGTTTTTAGAAAATCAGTTGGATATCTTAAAACGTTTATGGGAAGGTTTAAGACT
AGATAGAAAAACCCAATTCATAAAAAAATATGGCCACATAGCGCAGCTCCGGTACGTGCGAGTCAACTTCTCAGTGTTGAGAGCATTAGTTAGACATTGGGATCCGACCT
ATAGATGCTTTACTTTTAGCTCAATGGATATAACCCCAACTATCGAGGAATACCACACTCTCTTACAAATACCACCGCAAGAGAAAATTGAGATTTATTTCTATGATGGT
GGGTTTATGTTGAAAAGGGCAGTATCGCTGCTTGTAGGGAAGATGTATGCTGGTGAGATTGAAAAAAATGTGAAAAGGAAGGGAGAAAACACATGCTTGCTAATAGAATA
TGTCCTGAGTCTTCAACAGAGATTCCTTAATGAAGAAAGGGAGCTATCACTATTAGCTCTGTGCTTATTCAACTTGGTTTTATTCCCTAAAGTTAGTGGATACGTTGAAG
AGTGGGTGATCAAACTATTTGTCAAGGAGGTCGTAAAGGCATGGAAGGCGATTGCCAGAATCCAAAGTGGCAATTACCACGATAATATATTTGAAGGATACGAAAAGTGG
CATTTGAGTAGAGGAAAAACTGTGGTTCTCCTACCAACTGACAAGGGCAAAGGGAAGCTAGTGGTTCCCACTAGGAGAATTCTTTCTGAAATGAGCCCAAATCAGTCCAC
TCAGTGGAAGGTTCATAGGATAGATTACAAGCTGCGAGAAGGAACCCCACATCAGCTAAAGAAAGATTACAACTTGGGTTCAATCAAAATCTACCTCGAAGCATTGAGCT
GGAATTACAGTAGGCAAGAAGGGAGATCGGTTACCAAGGGAAAGAAAACAGACCGCTAG
Protein sequenceShow/hide protein sequence
MVKEHALSQNVVMPFQNVTFLENQLDILKRLWEGLRLDRKTQFIKKYGHIAQLRYVRVNFSVLRALVRHWDPTYRCFTFSSMDITPTIEEYHTLLQIPPQEKIEIYFYDG
GFMLKRAVSLLVGKMYAGEIEKNVKRKGENTCLLIEYVLSLQQRFLNEERELSLLALCLFNLVLFPKVSGYVEEWVIKLFVKEVVKAWKAIARIQSGNYHDNIFEGYEKW
HLSRGKTVVLLPTDKGKGKLVVPTRRILSEMSPNQSTQWKVHRIDYKLREGTPHQLKKDYNLGSIKIYLEALSWNYSRQEGRSVTKGKKTDR