; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc03g02510 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g02510
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionATP-dependent DNA helicase
Genome locationchr3:1903624..1914149
RNA-Seq ExpressionMoc03g02510
SyntenyMoc03g02510
Gene Ontology termsGO:0006351 - transcription, DNA-templated (biological process)
GO:0003677 - DNA binding (molecular function)
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR008193 - DNA-directed RNA polymerase Rpb11, 13-16kDa subunit, conserved site
IPR009025 - DNA-directed RNA polymerase, RBP11-like dimerisation domain
IPR033898 - DNA-directed RNA polymerases I and III subunit AC19
IPR036603 - RNA polymerase, RBP11-like subunit


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_012829391.1 PREDICTED: uncharacterized protein LOC105950571 [Erythranthe guttata]4.2e-0856.36Show/hide
Query:  RSLKDIGSFEDIQIHIASNVKIDQRVYNTPSADQVAAIWIEGNTDNI-NIRNAIL
        RSLKD  S +D+Q+HI+ +VK+DQRVYN+P+ADQVAA+W+EGN   + N R+ ++
Subjt:  RSLKDIGSFEDIQIHIASNVKIDQRVYNTPSADQVAAIWIEGNTDNI-NIRNAIL

XP_012837726.1 PREDICTED: uncharacterized protein LOC105958267 [Erythranthe guttata]2.5e-9852.66Show/hide
Query:  NTDNINIRNAILDNAWVAPYNP----------------------------------AAVAITKDDDDKFVNEIQDFQDARWVSAPEALWRIFDFRMNEMY
        N     +R A LDN WV PYNP                                   AV I+ +D++  ++EI+ FQDARWVSA EA+WRIF+F +NE+Y
Subjt:  NTDNINIRNAILDNAWVAPYNP----------------------------------AAVAITKDDDDKFVNEIQDFQDARWVSAPEALWRIFDFRMNEMY

Query:  PSVINLQLHLPNQQLVSYWENQNLQRLIGFEYASKTMLTQYFQMCGTDEDARKLLYKDFPEYYVWDKSAKEWMSRKKGYVISRINGANPIEGERYYLRLL
        P+VINL LHLPNQQ V+YW NQNL+ ++G++  SKTMLT+YF MC    DA+K LY++FPE+YVWDK  K W  RKK  VI RINGANPIEGER+YLRLL
Subjt:  PSVINLQLHLPNQQLVSYWENQNLQRLIGFEYASKTMLTQYFQMCGTDEDARKLLYKDFPEYYVWDKSAKEWMSRKKGYVISRINGANPIEGERYYLRLL

Query:  LNHVVGPMSFQHLLTVEGKQCLTFKESAQKRGLLESDQSLKACLDEAVIIQMPYALRRLFATLLVYCEPTEVRTLWDLYWKHMAEDFKANDNYTPAKQIQ
        LNHV GP SFQ LLTV   +C  FKE+AQ+RGL+ESDQS+  CL+EA+  QMP+ LRRLFA +LVYC PT V+ LWD Y+  M+EDFK     T   Q+ 
Subjt:  LNHVVGPMSFQHLLTVEGKQCLTFKESAQKRGLLESDQSLKACLDEAVIIQMPYALRRLFATLLVYCEPTEVRTLWDLYWKHMAEDFKANDNYTPAKQIQ

Query:  LVLKDLNSFLESMGKHVGQFDLPQMDEEIHDNGNISNNEIIDEESITIDEEDIQVSL
          LK L  FLESMGK +  +DLP +  E++D  +    EI DE SI I EED++  L
Subjt:  LVLKDLNSFLESMGKHVGQFDLPQMDEEIHDNGNISNNEIIDEESITIDEEDIQVSL

XP_012841028.1 PREDICTED: uncharacterized protein LOC105961341 [Erythranthe guttata]2.1e-0752.63Show/hide
Query:  RSLKDIGSFEDIQIHIASNVKIDQRVYNTPSADQVAAIWIEGNTDNINIRNAILDNA
        R+LKD  S +++Q+HI+ +V++DQRVYN+P+ADQVAAIW+EGN  +I     I+ +A
Subjt:  RSLKDIGSFEDIQIHIASNVKIDQRVYNTPSADQVAAIWIEGNTDNINIRNAILDNA

XP_012841028.1 PREDICTED: uncharacterized protein LOC105961341 [Erythranthe guttata]6.5e-9451.44Show/hide
Query:  IRNAILDNAWVAPYNP----------------------------------AAVAITKDDDDKFVNEIQDFQDARWVSAPEALWRIFDFRMNEMYPSVINL
        +R A L+N WV PYNP                                   AV I+++D++  ++EI+++QDARWVSA EA+WRI++F +NE+ P VI+L
Subjt:  IRNAILDNAWVAPYNP----------------------------------AAVAITKDDDDKFVNEIQDFQDARWVSAPEALWRIFDFRMNEMYPSVINL

Query:  QLHLPNQQLVSYWENQNLQRLIGFEYASKTMLTQYFQMCGTDEDARKLLYKDFPEYYVWDKSAKEWMSRKKGYVISRINGANPIEGERYYLRLLLNHVVG
         LHLPNQQ V+YW NQNL  ++ +++ SKTMLT+YF MC   E ARK LYK+FPEYYVWDK  + W  RKK  VI RI+GANP+EGERYYLRLLLNHV G
Subjt:  QLHLPNQQLVSYWENQNLQRLIGFEYASKTMLTQYFQMCGTDEDARKLLYKDFPEYYVWDKSAKEWMSRKKGYVISRINGANPIEGERYYLRLLLNHVVG

Query:  PMSFQHLLTVEGKQCLTFKESAQKRGLLESDQSLKACLDEAVIIQMPYALRRLFATLLVYCEPTEVRTLWDLYWKHMAEDFKANDNYTPAKQIQLVLKDL
        P SF  LLTV G +C  FKE++QKRGLLESDQS+  CL+EA+  QMP+ LRRLFAT+LVYC PT+VR LWD Y++ M+EDF+  ++ +  +QI   L+ +
Subjt:  PMSFQHLLTVEGKQCLTFKESAQKRGLLESDQSLKACLDEAVIIQMPYALRRLFATLLVYCEPTEVRTLWDLYWKHMAEDFKANDNYTPAKQIQLVLKDL

Query:  NSFLESMGKHVGQFDLPQMDEEIHDNGNISNNEIIDEESITIDEEDIQ
        N FLESMGK +  +DLP    + +      + EI DE SI I  ED +
Subjt:  NSFLESMGKHVGQFDLPQMDEEIHDNGNISNNEIIDEESITIDEEDIQ

XP_012841137.1 PREDICTED: uncharacterized protein LOC105961450 [Erythranthe guttata]2.2e-9450.85Show/hide
Query:  NTDNINIRNAILDNAWVAPYNP----------------------------------AAVAITKDDDDKFVNEIQDFQDARWVSAPEALWRIFDFRMNEMY
        N   + +R A L+N WV PYNP                                   AV I+++D++  ++EI+++QDARWVSA EA+WRI++F +NE+ 
Subjt:  NTDNINIRNAILDNAWVAPYNP----------------------------------AAVAITKDDDDKFVNEIQDFQDARWVSAPEALWRIFDFRMNEMY

Query:  PSVINLQLHLPNQQLVSYWENQNLQRLIGFEYASKTMLTQYFQMCGTDEDARKLLYKDFPEYYVWDKSAKEWMSRKKGYVISRINGANPIEGERYYLRLL
        P VI+L LHLPNQQ V+YW NQNL  ++ +++ SKTMLT+YF MC   E ARK LYK+FPEYYVWDK  + W  RKK  VI RI+GANP+EGERYYLRLL
Subjt:  PSVINLQLHLPNQQLVSYWENQNLQRLIGFEYASKTMLTQYFQMCGTDEDARKLLYKDFPEYYVWDKSAKEWMSRKKGYVISRINGANPIEGERYYLRLL

Query:  LNHVVGPMSFQHLLTVEGKQCLTFKESAQKRGLLESDQSLKACLDEAVIIQMPYALRRLFATLLVYCEPTEVRTLWDLYWKHMAEDFKANDNYTPAKQIQ
        LNHV GP SF  LLTV G +C  FKE++QKRGLLESDQS+  CL+EA+  QMP+ LRRLFAT+LVYC PT+VR LWD Y++ M+EDF+  ++ +  +QI 
Subjt:  LNHVVGPMSFQHLLTVEGKQCLTFKESAQKRGLLESDQSLKACLDEAVIIQMPYALRRLFATLLVYCEPTEVRTLWDLYWKHMAEDFKANDNYTPAKQIQ

Query:  LVLKDLNSFLESMGKHVGQFDLPQMDEEIHDNGNISNNEIIDEESITIDEEDIQ
          L+ +N FLESMGK +  +DLP    + +      + EI DE SI I  ED +
Subjt:  LVLKDLNSFLESMGKHVGQFDLPQMDEEIHDNGNISNNEIIDEESITIDEEDIQ

XP_012841137.1 PREDICTED: uncharacterized protein LOC105961450 [Erythranthe guttata]2.1e-0752.63Show/hide
Query:  RSLKDIGSFEDIQIHIASNVKIDQRVYNTPSADQVAAIWIEGNTDNINIRNAILDNA
        R+LKD  S +++Q+HI+ +V++DQRVYN+P+ADQVAAIW+EGN  +I     I+ +A
Subjt:  RSLKDIGSFEDIQIHIASNVKIDQRVYNTPSADQVAAIWIEGNTDNINIRNAILDNA

XP_012841137.1 PREDICTED: uncharacterized protein LOC105961450 [Erythranthe guttata]5.0e-9450.56Show/hide
Query:  NTDNINIRNAILDNAWVAPYNP----------------------------------AAVAITKDDDDKFVNEIQDFQDARWVSAPEALWRIFDFRMNEMY
        N   + +R A L+N WV PYNP                                   AV ++++D++  ++EI+++QDARWVSA EA+WRI++F +NE+ 
Subjt:  NTDNINIRNAILDNAWVAPYNP----------------------------------AAVAITKDDDDKFVNEIQDFQDARWVSAPEALWRIFDFRMNEMY

Query:  PSVINLQLHLPNQQLVSYWENQNLQRLIGFEYASKTMLTQYFQMCGTDEDARKLLYKDFPEYYVWDKSAKEWMSRKKGYVISRINGANPIEGERYYLRLL
        P VI+L LHLPNQQ V+YW NQNL  ++ +++ SKTMLT+YF MC   E ARK LYK+FPEYYVWDK  + W  RKK  VI RI+GANP+EGERYYLRLL
Subjt:  PSVINLQLHLPNQQLVSYWENQNLQRLIGFEYASKTMLTQYFQMCGTDEDARKLLYKDFPEYYVWDKSAKEWMSRKKGYVISRINGANPIEGERYYLRLL

Query:  LNHVVGPMSFQHLLTVEGKQCLTFKESAQKRGLLESDQSLKACLDEAVIIQMPYALRRLFATLLVYCEPTEVRTLWDLYWKHMAEDFKANDNYTPAKQIQ
        LNHV GP SF  LLTV G +C  FKE++QKRGLLESDQS+  CL+EA+  QMP+ LRRLFAT+LVYC PT+VR LWD Y++ M+EDF+  ++ +  +QI 
Subjt:  LNHVVGPMSFQHLLTVEGKQCLTFKESAQKRGLLESDQSLKACLDEAVIIQMPYALRRLFATLLVYCEPTEVRTLWDLYWKHMAEDFKANDNYTPAKQIQ

Query:  LVLKDLNSFLESMGKHVGQFDLPQMDEEIHDNGNISNNEIIDEESITIDEEDIQ
          L+ +N FLESMGK +  +DLP    + +      + EI DE SI I  ED +
Subjt:  LVLKDLNSFLESMGKHVGQFDLPQMDEEIHDNGNISNNEIIDEESITIDEEDIQ

XP_012847176.1 PREDICTED: uncharacterized protein LOC105967140 [Erythranthe guttata]2.1e-0752.63Show/hide
Query:  RSLKDIGSFEDIQIHIASNVKIDQRVYNTPSADQVAAIWIEGNTDNINIRNAILDNA
        R+LKD  S +++Q+HI+ +V++DQRVYN+P+ADQVAAIW+EGN  +I     I+ +A
Subjt:  RSLKDIGSFEDIQIHIASNVKIDQRVYNTPSADQVAAIWIEGNTDNINIRNAILDNA

XP_012847176.1 PREDICTED: uncharacterized protein LOC105967140 [Erythranthe guttata]4.7e-9251Show/hide
Query:  NINIRNAILDNAWVAPYNP----------------------------------AAVAITKDDDDKFVNEIQDFQDARWVSAPEALWRIFDFRMNEMYPSV
        N+ +R A L+N WV PYNP                                   A+ I+++ +++ ++EI+ FQDARW+SA EA+WRIF+F MNE+YP V
Subjt:  NINIRNAILDNAWVAPYNP----------------------------------AAVAITKDDDDKFVNEIQDFQDARWVSAPEALWRIFDFRMNEMYPSV

Query:  INLQLHLPNQQLVSYWENQNLQRLIGFEYASKTMLTQYFQMCGTDEDARKLLYKDFPEYYVWDKSAKEWMSRKKGYVISRINGANPIEGERYYLRLLLNH
        I+L LHLPNQQ V+YW NQNL+ ++ +++ SKTMLT+YF MC   E ARKLLYK+FPE+YVWDK  K W  RKK  VI RI+GANP+E ERYYLRLLLNH
Subjt:  INLQLHLPNQQLVSYWENQNLQRLIGFEYASKTMLTQYFQMCGTDEDARKLLYKDFPEYYVWDKSAKEWMSRKKGYVISRINGANPIEGERYYLRLLLNH

Query:  VVGPMSFQHLLTVEGKQCLTFKESAQKRGLLESDQSLKACLDEAVIIQMPYALRRLFATLLVYCEPTEVRTLWDLYWKHMAEDFKANDNYTPAKQIQLVL
        V GP SFQ LL+V+G +C  FKE+AQKRGLL+SDQS+  CL+EA+  QMP  LRRLFA +L YC PT VR LWD Y + M+EDFK     +   Q    L
Subjt:  VVGPMSFQHLLTVEGKQCLTFKESAQKRGLLESDQSLKACLDEAVIIQMPYALRRLFATLLVYCEPTEVRTLWDLYWKHMAEDFKANDNYTPAKQIQLVL

Query:  KDLNSFLESMGKHVGQFDLPQMDEEIHDNGNISNNEIIDEESITIDEED
        + LN FLESMGK +  +DLP +  +  +     + EI +E S+ I  ED
Subjt:  KDLNSFLESMGKHVGQFDLPQMDEEIHDNGNISNNEIIDEESITIDEED

TrEMBL top hitse value%identityAlignment
A0A2I0WLM1 ATP-dependent DNA helicase PIF14.4e-0341.67Show/hide
Query:  FKIESRSLKDIGSFEDIQIHIASNVKIDQRVYNTPSADQVAAIWIEG-NTDNINIRNAIL
        +  ++ +   + + E+ +I I S+V++DQRVYN+P+  QVAAIWIEG NT  +  R+ +L
Subjt:  FKIESRSLKDIGSFEDIQIHIASNVKIDQRVYNTPSADQVAAIWIEG-NTDNINIRNAIL

A0A2I0WLM1 ATP-dependent DNA helicase PIF11.2e-7744.75Show/hide
Query:  NTDNINIRNAILDNAWVAPYNP----------------------------------AAVAITKDDDDKFVNEIQDFQDARWVSAPEALWRIFDFRMNEMY
        N   + +R AILDN WV+PYNP                                   AV +     +  +NE+  F+D RWVS PEA+WRI+ F +NEMY
Subjt:  NTDNINIRNAILDNAWVAPYNP----------------------------------AAVAITKDDDDKFVNEIQDFQDARWVSAPEALWRIFDFRMNEMY

Query:  PSVINLQLHLPNQQLVSYWENQNLQRLIGFEYASKTMLTQYFQMCGTDEDARKLLYKDFPEYYVWDKSAKEWMSRKKGYVISRINGANPIEGERYYLRLL
        P V +LQLHLP+   V++ +  +LQR+I  E +SKTMLT+YF+M   D +AR  LY++FPE+YVW  + K W  R+K Y I R+  ANP+EGERYYLR+L
Subjt:  PSVINLQLHLPNQQLVSYWENQNLQRLIGFEYASKTMLTQYFQMCGTDEDARKLLYKDFPEYYVWDKSAKEWMSRKKGYVISRINGANPIEGERYYLRLL

Query:  LNHVVGPMSFQHLLTVEGKQCLTFKESAQKRGLLESDQSLKACLDEAVIIQMPYALRRLFATLLVYCEPTEVRTLWDLYWKHMAEDFKANDNYTPAKQIQ
        LNHV G  S+  LLTV G  C TF+ESA+KRGL+++D S+  CL EA   Q P  LRRLFAT+LVYCEP+ +R L+ +++  ++EDF+   N    +  Q
Subjt:  LNHVVGPMSFQHLLTVEGKQCLTFKESAQKRGLLESDQSLKACLDEAVIIQMPYALRRLFATLLVYCEPTEVRTLWDLYWKHMAEDFKANDNYTPAKQIQ

Query:  LVLKDLNSFLESMGKHVGQFDLPQMDEEIHDNGNISNNEIIDEESITIDEEDIQVSLSHHLN
        LVL+D++ FLESMGK +  +DLP + ++I D       E+ DE SI ++EE   ++  H LN
Subjt:  LVLKDLNSFLESMGKHVGQFDLPQMDEEIHDNGNISNNEIIDEESITIDEEDIQVSLSHHLN

A0A2I0XEU5 ATP-dependent DNA helicase6.0e-7743.58Show/hide
Query:  INIRNAILDNAWVAPYNP----------------------------------AAVAITKDDDDKFVNEIQDFQDARWVSAPEALWRIFDFRMNEMYPSVI
        + +RN  LDN WV PYNP                                   +V+I++ + ++  +EIQ +QD RWVSAPEALWRIF+F +NEMYPSV 
Subjt:  INIRNAILDNAWVAPYNP----------------------------------AAVAITKDDDDKFVNEIQDFQDARWVSAPEALWRIFDFRMNEMYPSVI

Query:  NLQLHLPNQQLVSYWENQNLQRLIGFEYASKTMLTQYFQMCGTDEDARKLLYKDFPEYYVWDKSAKEWMSRKKGYVISRINGANPIEGERYYLRLLLNHV
        NLQLHL +QQ V Y  NQNL  ++      K+MLT++F +  +D +A+K LY++ PE YVWDK+ K W  R++   I RIN  NP +GERYYLR+LLNHV
Subjt:  NLQLHLPNQQLVSYWENQNLQRLIGFEYASKTMLTQYFQMCGTDEDARKLLYKDFPEYYVWDKSAKEWMSRKKGYVISRINGANPIEGERYYLRLLLNHV

Query:  VGPMSFQHLLTVEGKQCLTFKESAQKRGLLESDQSLKACLDEAVIIQMPYALRRLFATLLVYCEPTEVRTLWDLYWKHMAEDFKANDNYTPAKQIQLVLK
         GP SF  LL V G QC TFKE+A+K GLLE+D  +  CLD+A   QMP ALR+LF+ LL+YCEPT V  LW+ Y+  ++ D++ N   +  + I   L 
Subjt:  VGPMSFQHLLTVEGKQCLTFKESAQKRGLLESDQSLKACLDEAVIIQMPYALRRLFATLLVYCEPTEVRTLWDLYWKHMAEDFKANDNYTPAKQIQLVLK

Query:  DLNSFLESMGKHVGQFDLPQMDEEIHDNGNISNNEIIDEESITIDEEDIQVSLSHHLN
        D+N++LE MG+ +  FDLP+              EI +E  +    EDI + L+ +++
Subjt:  DLNSFLESMGKHVGQFDLPQMDEEIHDNGNISNNEIIDEESITIDEEDIQVSLSHHLN

A0A5B7A9C3 ATP-dependent DNA helicase1.2e-9852.33Show/hide
Query:  NTDNINIRNAILDNAWVAPYNP----------------------------------AAVAITKDDDDKFVNEIQDFQDARWVSAPEALWRIFDFRMNEMY
        N + + +RNA LDN WV PYNP                                   AV I  +D++  V+EIQ FQDARWVSA EA+WRI++F +NE+Y
Subjt:  NTDNINIRNAILDNAWVAPYNP----------------------------------AAVAITKDDDDKFVNEIQDFQDARWVSAPEALWRIFDFRMNEMY

Query:  PSVINLQLHLPNQQLVSYWENQNLQRLIGFEYASKTMLTQYFQMCGTDEDARKLLYKDFPEYYVWDKSAKEWMSRKKGYVISRINGANPIEGERYYLRLL
        P+VINLQLHLPN+Q V+YWENQNL+ +I +++ SKTMLT++F  C   E+AR+ LY++FPE+YVW +  + W  RKKG VI RINGANP+EGERYYLRLL
Subjt:  PSVINLQLHLPNQQLVSYWENQNLQRLIGFEYASKTMLTQYFQMCGTDEDARKLLYKDFPEYYVWDKSAKEWMSRKKGYVISRINGANPIEGERYYLRLL

Query:  LNHVVGPMSFQHLLTVEGKQCLTFKESAQKRGLLESDQSLKACLDEAVIIQMPYALRRLFATLLVYCEPTEVRTLWDLYWKHMAEDFKANDNYTPAKQIQ
        LNHV GP SF+ LLT +G + LTFKESAQKRGLLESD S+  CL EA + QMP+ALRRLFAT+LVYCEPT+VR LWD Y++ M+EDFK     +   QI 
Subjt:  LNHVVGPMSFQHLLTVEGKQCLTFKESAQKRGLLESDQSLKACLDEAVIIQMPYALRRLFATLLVYCEPTEVRTLWDLYWKHMAEDFKANDNYTPAKQIQ

Query:  LVLKDLNSFLESMGKHVGQFDLPQMDEEIHDNGNISNNEIIDEESITIDEEDIQVSLSHHLNLSP
          +K L  FLESMGK +  +DLP    +  D       EI DE ++ I  +D     S  LNL+P
Subjt:  LVLKDLNSFLESMGKHVGQFDLPQMDEEIHDNGNISNNEIIDEESITIDEEDIQVSLSHHLNLSP

A0A5B7A9C3 ATP-dependent DNA helicase1.1e-0961.4Show/hide
Query:  RSLKDIGSFEDIQIHIASNVKIDQRVYNTPSADQVAAIWIEGNTDNINIRNAILDNA
        R LKD  SF+D QIHI  NV++DQRVYN+P+ADQVAAIWIEGN  +I +   I+ +A
Subjt:  RSLKDIGSFEDIQIHIASNVKIDQRVYNTPSADQVAAIWIEGNTDNINIRNAILDNA

A0A5B7A9C3 ATP-dependent DNA helicase2.2e-7945.45Show/hide
Query:  INIRNAILDNAWVAPYNPAAVA-----------------------ITKDDDDKFVNEIQDFQDARWVSAPEALWRIFDFRMNEMYPSVINLQLHLPNQQL
        + +RN ILDN WV PYNP  ++                       I K ++    +EIQ +QD RWVSA EALWRIF+F +NEMYPSV NLQLHL  +Q 
Subjt:  INIRNAILDNAWVAPYNPAAVA-----------------------ITKDDDDKFVNEIQDFQDARWVSAPEALWRIFDFRMNEMYPSVINLQLHLPNQQL

Query:  VSYWENQNLQRLIGFEYASKTMLTQYFQMCGTDEDARKLLYKDFPEYYVWDKSAKEWMSRKKGYVISRINGANPIEGERYYLRLLLNHVVGPMSFQHLLT
        + Y +NQNL  ++      KTMLT++F +   D +ARK LY++ PE YVWDK+ K W  R+K   I RIN  NP +GERYYLR+LLNHV GP SF  LL 
Subjt:  VSYWENQNLQRLIGFEYASKTMLTQYFQMCGTDEDARKLLYKDFPEYYVWDKSAKEWMSRKKGYVISRINGANPIEGERYYLRLLLNHVVGPMSFQHLLT

Query:  VEGKQCLTFKESAQKRGLLESDQSLKACLDEAVIIQMPYALRRLFATLLVYCEPTEVRTLWDLYWKHMAEDFKANDNYTPAKQIQLVLKDLNSFLESMGK
        V G  C TFKE+A+K GLLE D  +  CL++A + QMPYA R+LF  +L+YCEPT VR LW  Y+K +++D++ N   T  + +   L D+   LE MG 
Subjt:  VEGKQCLTFKESAQKRGLLESDQSLKACLDEAVIIQMPYALRRLFATLLVYCEPTEVRTLWDLYWKHMAEDFKANDNYTPAKQIQLVLKDLNSFLESMGK

Query:  HVGQFDLPQM----DEEIHDNGNISNNEIIDEESITIDEEDIQVSLSHHLNL
         + ++DLP+M    ++ I  N ++ N E+I+E ++    EDI  +  H+LN+
Subjt:  HVGQFDLPQM----DEEIHDNGNISNNEIIDEESITIDEEDIQVSLSHHLNL

A0A6P5G2G6 ATP-dependent DNA helicase4.7e-0553.7Show/hide
Query:  ILKTKFKIES-RSLKDIGSFEDIQIHIASNVKIDQRVYNTPSADQVAAIWIEGN
        IL T   + S RSL DIG+ ++ +I ++++V++DQRVYN P+A QVAAIW+EGN
Subjt:  ILKTKFKIES-RSLKDIGSFEDIQIHIASNVKIDQRVYNTPSADQVAAIWIEGN

A0A6P5G2G6 ATP-dependent DNA helicase3.5e-7750.34Show/hide
Query:  INIRNAILDNAWVAPYNP----------------------------------AAVAITKDDDDKFVNEIQDFQDARWVSAPEALWRIFDFRMNEMYPSVI
        +N+R   ++N WV PYNP                                   AV I  DD +K V+EI++FQDARWVS PEALWRI++F ++EM P VI
Subjt:  INIRNAILDNAWVAPYNP----------------------------------AAVAITKDDDDKFVNEIQDFQDARWVSAPEALWRIFDFRMNEMYPSVI

Query:  NLQLHLPNQQLVSYWENQNLQRLIGFEYASKTMLTQYFQMCGTDEDARKLLYKDFPEYYVWDKSAKEWMSRKKGYVISRINGANPIEGERYYLRLLLNHV
        NLQLHLP  Q + YW+ QNL+ ++  +    TMLT+YF+MC  D+DAR  LY++F E+YVW+   K W  RK   VI RI  ANP EGERYY RLLLNHV
Subjt:  NLQLHLPNQQLVSYWENQNLQRLIGFEYASKTMLTQYFQMCGTDEDARKLLYKDFPEYYVWDKSAKEWMSRKKGYVISRINGANPIEGERYYLRLLLNHV

Query:  VGPMSFQHLLTVEGKQCLTFKESAQKRGLLESDQSLKACLDEAVIIQMPYALRRLFATLLVYCEPTEVRTLWDLYWKHMAEDFKANDNYTPAKQIQ
         GP SF+ LLTV GK+C TFKE+A++ GLLESD S+  CL EAV  +MP ALR LFAT+LV C PT++R LW+ Y+  M+EDF+     +PA Q+Q
Subjt:  VGPMSFQHLLTVEGKQCLTFKESAQKRGLLESDQSLKACLDEAVIIQMPYALRRLFATLLVYCEPTEVRTLWDLYWKHMAEDFKANDNYTPAKQIQ

SwissProt top hitse value%identityAlignment
P0DPB6 DNA-directed RNA polymerases I and III subunit RPAC22.8e-1542.55Show/hide
Query:  MEHGSFSDESKSTFSMADEDHTLANALRYTLNQDPRVTFCGYSIPHPSDNRVNIRVQTTGD-SAREVLKDSCQNLMVVCQHVRNTFDKSVLDFK
        M   + +D    TF + +EDHTL N+LRY + ++P V FCGY+  HPS++++N+R+QT G   A E  +     LM VCQHV + F+ S+ D+K
Subjt:  MEHGSFSDESKSTFSMADEDHTLANALRYTLNQDPRVTFCGYSIPHPSDNRVNIRVQTTGD-SAREVLKDSCQNLMVVCQHVRNTFDKSVLDFK

P28000 DNA-directed RNA polymerases I and III subunit RPAC23.7e-1540.43Show/hide
Query:  QVHSMEHGSFSDESKSTFSMADEDHTLANALRYTLNQDPRVTFCGYSIPHPSDNRVNIRVQTTGD-SAREVLKDSCQNLMVVCQHVRNTFDKSV
        ++  +   +  D + ++F + +EDHTL NALRY + ++P V FCGYSIPHPS+N +NIR+QT G+ +A + L+   ++LM +C  V + F + +
Subjt:  QVHSMEHGSFSDESKSTFSMADEDHTLANALRYTLNQDPRVTFCGYSIPHPSDNRVNIRVQTTGD-SAREVLKDSCQNLMVVCQHVRNTFDKSV

P97304 DNA-directed RNA polymerases I and III subunit RPAC28.2e-1541.24Show/hide
Query:  MEHGSFSDESKSTFSMADEDHTLANALRYTLNQDPRVTFCGYSIPHPSDNRVNIRVQTTGD-SAREVLKDSCQNLMVVCQHVRNTFDKSVLDFKLTK
        M   + +D    TF + +EDHTL N LRY + ++P V FCGY+  HPS++++N+R+QT G   A E  +     L+ VCQHV   F+ S+ D+K  K
Subjt:  MEHGSFSDESKSTFSMADEDHTLANALRYTLNQDPRVTFCGYSIPHPSDNRVNIRVQTTGD-SAREVLKDSCQNLMVVCQHVRNTFDKSVLDFKLTK

Q5XK67 DNA-directed RNA polymerases I and III subunit RPAC26.7e-1747.25Show/hide
Query:  SDESKSTFSMADEDHTLANALRYTLNQDPRVTFCGYSIPHPSDNRVNIRVQT-TGDSAREVLKDSCQNLMVVCQHVRNTFDKSVLDFKLTK
        ++ES  TF + +EDHTL N+LRY + ++P V FCGYSI HPS+ ++N R+QT  G  A E  +     L+ VCQHV NTF+ S+ ++K  K
Subjt:  SDESKSTFSMADEDHTLANALRYTLNQDPRVTFCGYSIPHPSDNRVNIRVQT-TGDSAREVLKDSCQNLMVVCQHVRNTFDKSVLDFKLTK

Q6DRI4 DNA-directed RNA polymerases I and III subunit RPAC21.3e-1544Show/hide
Query:  QVHSME--HGSFSDESKSTFSMADEDHTLANALRYTLNQDPRVTFCGYSIPHPSDNRVNIRVQT-TGDSAREVLKDSCQNLMVVCQHVRNTFDKSVLDFK
        Q H++E      +DE   TF + +EDHTL N+LRY + +   V FCGYSI HPS++++N R+QT  G  A E L++   NL  VC+HV  TF+  + +FK
Subjt:  QVHSME--HGSFSDESKSTFSMADEDHTLANALRYTLNQDPRVTFCGYSIPHPSDNRVNIRVQT-TGDSAREVLKDSCQNLMVVCQHVRNTFDKSVLDFK

Arabidopsis top hitse value%identityAlignment
AT2G29540.1 RNApolymerase 14 kDa subunit4.1e-3063.44Show/hide
Query:  MEHGSFSDESKSTFSMADEDHTLANALRYTLNQDPRVTFCGYSIPHPSDNRVNIRVQTTGDSAREVLKDSCQNLMVVCQHVRNTFDKSVLDFK
        MEHGSF++ S ++F++++EDHTLANA+R+ LNQDPRVT   Y+IPHPS  +VNIRVQTTGD AREV KD+CQ LM + +HVR+ FDK+V ++K
Subjt:  MEHGSFSDESKSTFSMADEDHTLANALRYTLNQDPRVTFCGYSIPHPSDNRVNIRVQTTGDSAREVLKDSCQNLMVVCQHVRNTFDKSVLDFK

AT2G29540.2 RNApolymerase 14 kDa subunit4.1e-3063.44Show/hide
Query:  MEHGSFSDESKSTFSMADEDHTLANALRYTLNQDPRVTFCGYSIPHPSDNRVNIRVQTTGDSAREVLKDSCQNLMVVCQHVRNTFDKSVLDFK
        MEHGSF++ S ++F++++EDHTLANA+R+ LNQDPRVT   Y+IPHPS  +VNIRVQTTGD AREV KD+CQ LM + +HVR+ FDK+V ++K
Subjt:  MEHGSFSDESKSTFSMADEDHTLANALRYTLNQDPRVTFCGYSIPHPSDNRVNIRVQTTGDSAREVLKDSCQNLMVVCQHVRNTFDKSVLDFK

AT2G29540.3 RNApolymerase 14 kDa subunit4.4e-1664.41Show/hide
Query:  PRVTFCGYSIPHPSDNRVNIRVQTTGDSAREVLKDSCQNLMVVCQHVRNTFDKSVLDFK
        PRVT   Y+IPHPS  +VNIRVQTTGD AREV KD+CQ LM + +HVR+ FDK+V ++K
Subjt:  PRVTFCGYSIPHPSDNRVNIRVQTTGDSAREVLKDSCQNLMVVCQHVRNTFDKSVLDFK

AT3G52090.1 DNA-directed RNA polymerase, RBP11-like9.9e-0830.49Show/hide
Query:  STFSMADEDHTLANALRYTLNQDPRVTFCGYSIPHPSDNRVNIRVQTTGDSA-REVLKDSCQNLMVVCQHVRNTFDKSVLDF
        ++F++  EDHT+ N +R  L++D  V F GY +PHP   ++ +R+ TT  S+  +    +  +L     +++N F+  V  F
Subjt:  STFSMADEDHTLANALRYTLNQDPRVTFCGYSIPHPSDNRVNIRVQTTGDSA-REVLKDSCQNLMVVCQHVRNTFDKSVLDF

AT3G52090.2 DNA-directed RNA polymerase, RBP11-like2.3e-0438.64Show/hide
Query:  STFSMADEDHTLANALRYTLNQDPRVTFCGYSIPHPSDNRVNIR
        ++F++  EDHT+ N +R  L++D  V F GY +PHP   ++ +R
Subjt:  STFSMADEDHTLANALRYTLNQDPRVTFCGYSIPHPSDNRVNIR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATACTGAAAACGAAGTTCAAAATAGAATCAAGATCCTTGAAGGATATTGGGTCATTCGAAGACATCCAAATACATATTGCAAGTAATGTGAAGATTGATCAA
CGAGTCTATAACACACCCTCAGCAGATCAAGTTGCTGCAATATGGATTGAAGGAAACACAGACAATATAAATATTAGGAATGCAATCTTAGATAATGCTTGGGTT
GCTCCTTATAATCCAGCAGCAGTTGCAATAACAAAGGATGATGATGACAAATTTGTCAATGAGATACAAGACTTCCAAGATGCAAGATGGGTTTCAGCACCAGAA
GCGTTGTGGAGAATTTTTGACTTTAGGATGAATGAAATGTATCCTTCAGTTATAAATCTACAACTACATCTTCCAAATCAACAATTGGTTTCATATTGGGAGAAC
CAGAATTTACAACGGCTCATTGGATTTGAATATGCTTCGAAAACAATGTTGACACAATATTTTCAAATGTGTGGAACAGATGAAGATGCTAGAAAATTGCTTTAC
AAAGATTTTCCAGAGTACTATGTATGGGATAAAAGTGCAAAAGAATGGATGTCTCGAAAAAAAGGATATGTTATATCTAGAATTAATGGAGCAAATCCAATTGAA
GGAGAAAGGTATTACCTCAGACTTTTACTAAATCATGTTGTAGGACCTATGTCTTTTCAACATTTGCTAACAGTTGAAGGAAAACAATGTCTTACATTCAAAGAG
TCAGCACAAAAAAGAGGTTTGCTTGAATCTGATCAAAGTTTGAAAGCCTGCTTAGATGAAGCTGTAATTATTCAAATGCCATATGCACTTCGAAGGCTTTTTGCT
ACTTTATTAGTTTATTGTGAGCCAACAGAAGTTCGAACATTATGGGATCTTTATTGGAAACATATGGCTGAAGATTTTAAGGCAAACGACAATTATACGCCGGCC
AAACAAATTCAATTAGTCCTTAAAGACTTGAATTCCTTTTTGGAGTCAATGGGAAAACATGTTGGACAATTTGACCTACCTCAGATGGATGAGGAAATTCATGAT
AATGGAAACATTTCCAACAACGAAATCATAGATGAAGAATCTATTACAATAGACGAAGAGGATATCCAAGTGTCATTAAGCCACCACCTGAATCTCTCTCCCTCC
TCTTCGTGTGTAGCAGCCACCTCCGAATCTTCCTCTCCCCTCTCCGACGATATATCCACGACGGCCGGCGACCCACCAAGCCCGGGCGGCTCTCCTCCCCACGGC
GGCAACGTGAGTCGTAGATTGGGTAACCGCGGCTCCTCTCAAAACCCTGACGGCCGGCGACGCCCCGACGCGAGCTTCTCCTCCGGCTGCGCATCTTGGTTGGTA
CTATGTTCAAAGTTATGCTTTTATGTTGTCACTGAGTTGCAAGTGCATTCAATGGAACATGGATCGTTCTCAGATGAGAGCAAATCGACATTTTCTATGGCTGAT
GAAGATCATACACTTGCAAATGCTCTCAGATACACCTTGAATCAAGATCCAAGAGTGACATTCTGTGGATACAGCATCCCTCATCCTTCAGATAATCGTGTTAAT
ATCAGAGTCCAAACAACAGGTGATTCTGCAAGAGAGGTTTTGAAAGATTCGTGCCAGAACTTGATGGTGGTGTGCCAGCACGTGAGGAACACGTTTGACAAATCT
GTTCTTGATTTCAAACTCACCAAGCCTGTTGGAGACATTAATATCAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGATACTGAAAACGAAGTTCAAAATAGAATCAAGATCCTTGAAGGATATTGGGTCATTCGAAGACATCCAAATACATATTGCAAGTAATGTGAAGATTGATCAA
CGAGTCTATAACACACCCTCAGCAGATCAAGTTGCTGCAATATGGATTGAAGGAAACACAGACAATATAAATATTAGGAATGCAATCTTAGATAATGCTTGGGTT
GCTCCTTATAATCCAGCAGCAGTTGCAATAACAAAGGATGATGATGACAAATTTGTCAATGAGATACAAGACTTCCAAGATGCAAGATGGGTTTCAGCACCAGAA
GCGTTGTGGAGAATTTTTGACTTTAGGATGAATGAAATGTATCCTTCAGTTATAAATCTACAACTACATCTTCCAAATCAACAATTGGTTTCATATTGGGAGAAC
CAGAATTTACAACGGCTCATTGGATTTGAATATGCTTCGAAAACAATGTTGACACAATATTTTCAAATGTGTGGAACAGATGAAGATGCTAGAAAATTGCTTTAC
AAAGATTTTCCAGAGTACTATGTATGGGATAAAAGTGCAAAAGAATGGATGTCTCGAAAAAAAGGATATGTTATATCTAGAATTAATGGAGCAAATCCAATTGAA
GGAGAAAGGTATTACCTCAGACTTTTACTAAATCATGTTGTAGGACCTATGTCTTTTCAACATTTGCTAACAGTTGAAGGAAAACAATGTCTTACATTCAAAGAG
TCAGCACAAAAAAGAGGTTTGCTTGAATCTGATCAAAGTTTGAAAGCCTGCTTAGATGAAGCTGTAATTATTCAAATGCCATATGCACTTCGAAGGCTTTTTGCT
ACTTTATTAGTTTATTGTGAGCCAACAGAAGTTCGAACATTATGGGATCTTTATTGGAAACATATGGCTGAAGATTTTAAGGCAAACGACAATTATACGCCGGCC
AAACAAATTCAATTAGTCCTTAAAGACTTGAATTCCTTTTTGGAGTCAATGGGAAAACATGTTGGACAATTTGACCTACCTCAGATGGATGAGGAAATTCATGAT
AATGGAAACATTTCCAACAACGAAATCATAGATGAAGAATCTATTACAATAGACGAAGAGGATATCCAAGTGTCATTAAGCCACCACCTGAATCTCTCTCCCTCC
TCTTCGTGTGTAGCAGCCACCTCCGAATCTTCCTCTCCCCTCTCCGACGATATATCCACGACGGCCGGCGACCCACCAAGCCCGGGCGGCTCTCCTCCCCACGGC
GGCAACGTGAGTCGTAGATTGGGTAACCGCGGCTCCTCTCAAAACCCTGACGGCCGGCGACGCCCCGACGCGAGCTTCTCCTCCGGCTGCGCATCTTGGTTGGTA
CTATGTTCAAAGTTATGCTTTTATGTTGTCACTGAGTTGCAAGTGCATTCAATGGAACATGGATCGTTCTCAGATGAGAGCAAATCGACATTTTCTATGGCTGAT
GAAGATCATACACTTGCAAATGCTCTCAGATACACCTTGAATCAAGATCCAAGAGTGACATTCTGTGGATACAGCATCCCTCATCCTTCAGATAATCGTGTTAAT
ATCAGAGTCCAAACAACAGGTGATTCTGCAAGAGAGGTTTTGAAAGATTCGTGCCAGAACTTGATGGTGGTGTGCCAGCACGTGAGGAACACGTTTGACAAATCT
GTTCTTGATTTCAAACTCACCAAGCCTGTTGGAGACATTAATATCAAATAA
Protein sequenceShow/hide protein sequence
MILKTKFKIESRSLKDIGSFEDIQIHIASNVKIDQRVYNTPSADQVAAIWIEGNTDNINIRNAILDNAWVAPYNPAAVAITKDDDDKFVNEIQDFQDARWVSAPE
ALWRIFDFRMNEMYPSVINLQLHLPNQQLVSYWENQNLQRLIGFEYASKTMLTQYFQMCGTDEDARKLLYKDFPEYYVWDKSAKEWMSRKKGYVISRINGANPIE
GERYYLRLLLNHVVGPMSFQHLLTVEGKQCLTFKESAQKRGLLESDQSLKACLDEAVIIQMPYALRRLFATLLVYCEPTEVRTLWDLYWKHMAEDFKANDNYTPA
KQIQLVLKDLNSFLESMGKHVGQFDLPQMDEEIHDNGNISNNEIIDEESITIDEEDIQVSLSHHLNLSPSSSCVAATSESSSPLSDDISTTAGDPPSPGGSPPHG
GNVSRRLGNRGSSQNPDGRRRPDASFSSGCASWLVLCSKLCFYVVTELQVHSMEHGSFSDESKSTFSMADEDHTLANALRYTLNQDPRVTFCGYSIPHPSDNRVN
IRVQTTGDSAREVLKDSCQNLMVVCQHVRNTFDKSVLDFKLTKPVGDINIK