; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc03g02560 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g02560
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionTransposase
Genome locationchr3:1932927..1941153
RNA-Seq ExpressionMoc03g02560
SyntenyMoc03g02560
Gene Ontology termsGO:0016787 - hydrolase activity (molecular function)
InterPro domainsIPR029480 - Transposase-associated domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031799.1 uncharacterized protein E6C27_scaffold848G00410 [Cucumis melo var. makuwa]1.5e-1958.54Show/hide
Query:  MDKSWMKKNRLSDDYELGVESFIEFGFHHANGSKVIRCPCLKCGNRTDKDAATIRNHLYEHGIDPSYRDNLMITQDLEKENV
        MDKSWM +NR+S +Y++GVESFI+FG  HA GS +IRCPCLKCGNR  KD + +R HLY +GID SY+      +DL  E V
Subjt:  MDKSWMKKNRLSDDYELGVESFIEFGFHHANGSKVIRCPCLKCGNRTDKDAATIRNHLYEHGIDPSYRDNLMITQDLEKENV

KAA0042290.1 transposase [Cucumis melo var. makuwa]3.0e-2067.65Show/hide
Query:  MDKSWMKKNRLSDDYELGVESFIEFGFHHANGSKVIRCPCLKCGNRTDKDAATIRNHLYEHGIDPSYR
        MDKSWM +NR+S +YELGVE+FI+FGF HA GS  IRCPCLKCGNR  +D +T+R HLY +GID SY+
Subjt:  MDKSWMKKNRLSDDYELGVESFIEFGFHHANGSKVIRCPCLKCGNRTDKDAATIRNHLYEHGIDPSYR

KAA0046955.1 transposase [Cucumis melo var. makuwa]1.1e-1964.71Show/hide
Query:  MDKSWMKKNRLSDDYELGVESFIEFGFHHANGSKVIRCPCLKCGNRTDKDAATIRNHLYEHGIDPSYR
        MDKSWM +NR+S +YELGV++F++FGF HA GS  IRCPCLKCGNR  +D +T+R HLY +GID SY+
Subjt:  MDKSWMKKNRLSDDYELGVESFIEFGFHHANGSKVIRCPCLKCGNRTDKDAATIRNHLYEHGIDPSYR

TYK24392.1 transposase [Cucumis melo var. makuwa]3.0e-2067.65Show/hide
Query:  MDKSWMKKNRLSDDYELGVESFIEFGFHHANGSKVIRCPCLKCGNRTDKDAATIRNHLYEHGIDPSYR
        MDKSWM +NR+S +YELGVE+FI+FGF HA GS  IRCPCLKCGNR  +D +T+R HLY +GID SY+
Subjt:  MDKSWMKKNRLSDDYELGVESFIEFGFHHANGSKVIRCPCLKCGNRTDKDAATIRNHLYEHGIDPSYR

XP_022156813.1 uncharacterized protein LOC111023653 [Momordica charantia]6.9e-2588.71Show/hide
Query:  KKNRLSDDYELGVESFIEFGFHHANGSKVIRCPCLKCGNRTDKDAATIRNHLYEHGIDPSYR
        +KNRL +DYELGVESFIEFGFHHANGSK+IRCPCLKCG R DKDAATIRNHLYEHGID SYR
Subjt:  KKNRLSDDYELGVESFIEFGFHHANGSKVIRCPCLKCGNRTDKDAATIRNHLYEHGIDPSYR

TrEMBL top hitse value%identityAlignment
A0A5A7SR84 Transpos_assoc domain-containing protein7.2e-2058.54Show/hide
Query:  MDKSWMKKNRLSDDYELGVESFIEFGFHHANGSKVIRCPCLKCGNRTDKDAATIRNHLYEHGIDPSYRDNLMITQDLEKENV
        MDKSWM +NR+S +Y++GVESFI+FG  HA GS +IRCPCLKCGNR  KD + +R HLY +GID SY+      +DL  E V
Subjt:  MDKSWMKKNRLSDDYELGVESFIEFGFHHANGSKVIRCPCLKCGNRTDKDAATIRNHLYEHGIDPSYRDNLMITQDLEKENV

A0A5A7TG31 Transposase1.4e-2067.65Show/hide
Query:  MDKSWMKKNRLSDDYELGVESFIEFGFHHANGSKVIRCPCLKCGNRTDKDAATIRNHLYEHGIDPSYR
        MDKSWM +NR+S +YELGVE+FI+FGF HA GS  IRCPCLKCGNR  +D +T+R HLY +GID SY+
Subjt:  MDKSWMKKNRLSDDYELGVESFIEFGFHHANGSKVIRCPCLKCGNRTDKDAATIRNHLYEHGIDPSYR

A0A5A7TZY3 Transposase5.5e-2064.71Show/hide
Query:  MDKSWMKKNRLSDDYELGVESFIEFGFHHANGSKVIRCPCLKCGNRTDKDAATIRNHLYEHGIDPSYR
        MDKSWM +NR+S +YELGV++F++FGF HA GS  IRCPCLKCGNR  +D +T+R HLY +GID SY+
Subjt:  MDKSWMKKNRLSDDYELGVESFIEFGFHHANGSKVIRCPCLKCGNRTDKDAATIRNHLYEHGIDPSYR

A0A5D3DLJ9 Transposase1.4e-2067.65Show/hide
Query:  MDKSWMKKNRLSDDYELGVESFIEFGFHHANGSKVIRCPCLKCGNRTDKDAATIRNHLYEHGIDPSYR
        MDKSWM +NR+S +YELGVE+FI+FGF HA GS  IRCPCLKCGNR  +D +T+R HLY +GID SY+
Subjt:  MDKSWMKKNRLSDDYELGVESFIEFGFHHANGSKVIRCPCLKCGNRTDKDAATIRNHLYEHGIDPSYR

A0A6J1DRM7 uncharacterized protein LOC1110236533.3e-2588.71Show/hide
Query:  KKNRLSDDYELGVESFIEFGFHHANGSKVIRCPCLKCGNRTDKDAATIRNHLYEHGIDPSYR
        +KNRL +DYELGVESFIEFGFHHANGSK+IRCPCLKCG R DKDAATIRNHLYEHGID SYR
Subjt:  KKNRLSDDYELGVESFIEFGFHHANGSKVIRCPCLKCGNRTDKDAATIRNHLYEHGIDPSYR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACAGCCTCCCTCCCTCCATTCTTCATGTCGTCTCTGCCTCTCCCACACTCACAGTCTTTCTCTCCCTCGTGACCTCGCCGTCGATTCACTCTCAACCCGCCCTGTT
GCACTCCGCTGCCACTGTCACTAGTCGCTGCTGCCGCCGCACTCCGCAGCCAGTGCTCGTTGTCGTCGCCACACGCTGCAACAATCTCCTTCTCCTTCGTTGCATTGGAA
AGTTGTCCCCCCCCCCCCCCCCCCCGCCTACTCCAGCCAGATCTGAATGCTGTCGTGGCCGAAGTGCTCCTAGAACTGAAATTTGCATCTGTCGTCTTGCTCTAAGCAGA
TCCAACACTGCTGTCGCCTTCTTTCTTCCAGATCCAAAAGTTGTCAAGCTGCGCCGGCCAGATCCATCCGAAGCTGATCGCGCCTCCCTTAGTTCATTCTCGAGGTCTGT
TACCCACACCCTTCAGGAAATCGCGTGGGGATTTCATTTTATCACGAGAGAAAACAAGAGTGACAATGGTGCTACACCTCTCGGTAATTTTGTTAGGACAATGGACAAAT
CATGGATGAAAAAAAATAGATTGTCTGACGATTATGAGTTAGGAGTCGAGTCATTCATTGAATTTGGGTTCCATCATGCAAATGGTTCTAAGGTTATTCGTTGTCCCTGC
TTGAAATGTGGAAACCGTACAGATAAGGATGCTGCAACCATTAGAAATCACTTGTACGAACATGGTATTGATCCGAGCTATAGGGATAATCTCATGATAACGCAAGACTT
GGAAAAAGAGAATGTGGACAAAGATGGGGATTTGTTATCCATCGCACTAGGCAATAGGGATCAGCCCGGACTTGTTAGAGCAGTAGATATTGGACAAGGAAAAAACTTTG
GCGTTCAAGGAGGAAACTCATTGTCATCTGCACTTGGGTCCATCGATAATGTTGTCGTTGCGGGCATTATATTTAAATCTGGGAGGAATGATGGAAACGTGAAAGTGTCC
ATAGACGTGGTGGTTGATGACGACTCTCGACTTCCAATTCCTTCGCATGCAAGATATGATATTCTCTCGCAAAAAATAGTGAGAAATGTGTTTAGATAG
mRNA sequenceShow/hide mRNA sequence
ATGCACAGCCTCCCTCCCTCCATTCTTCATGTCGTCTCTGCCTCTCCCACACTCACAGTCTTTCTCTCCCTCGTGACCTCGCCGTCGATTCACTCTCAACCCGCCCTGTT
GCACTCCGCTGCCACTGTCACTAGTCGCTGCTGCCGCCGCACTCCGCAGCCAGTGCTCGTTGTCGTCGCCACACGCTGCAACAATCTCCTTCTCCTTCGTTGCATTGGAA
AGTTGTCCCCCCCCCCCCCCCCCCCGCCTACTCCAGCCAGATCTGAATGCTGTCGTGGCCGAAGTGCTCCTAGAACTGAAATTTGCATCTGTCGTCTTGCTCTAAGCAGA
TCCAACACTGCTGTCGCCTTCTTTCTTCCAGATCCAAAAGTTGTCAAGCTGCGCCGGCCAGATCCATCCGAAGCTGATCGCGCCTCCCTTAGTTCATTCTCGAGGTCTGT
TACCCACACCCTTCAGGAAATCGCGTGGGGATTTCATTTTATCACGAGAGAAAACAAGAGTGACAATGGTGCTACACCTCTCGGTAATTTTGTTAGGACAATGGACAAAT
CATGGATGAAAAAAAATAGATTGTCTGACGATTATGAGTTAGGAGTCGAGTCATTCATTGAATTTGGGTTCCATCATGCAAATGGTTCTAAGGTTATTCGTTGTCCCTGC
TTGAAATGTGGAAACCGTACAGATAAGGATGCTGCAACCATTAGAAATCACTTGTACGAACATGGTATTGATCCGAGCTATAGGGATAATCTCATGATAACGCAAGACTT
GGAAAAAGAGAATGTGGACAAAGATGGGGATTTGTTATCCATCGCACTAGGCAATAGGGATCAGCCCGGACTTGTTAGAGCAGTAGATATTGGACAAGGAAAAAACTTTG
GCGTTCAAGGAGGAAACTCATTGTCATCTGCACTTGGGTCCATCGATAATGTTGTCGTTGCGGGCATTATATTTAAATCTGGGAGGAATGATGGAAACGTGAAAGTGTCC
ATAGACGTGGTGGTTGATGACGACTCTCGACTTCCAATTCCTTCGCATGCAAGATATGATATTCTCTCGCAAAAAATAGTGAGAAATGTGTTTAGATAG
Protein sequenceShow/hide protein sequence
MHSLPPSILHVVSASPTLTVFLSLVTSPSIHSQPALLHSAATVTSRCCRRTPQPVLVVVATRCNNLLLLRCIGKLSPPPPPPPTPARSECCRGRSAPRTEICICRLALSR
SNTAVAFFLPDPKVVKLRRPDPSEADRASLSSFSRSVTHTLQEIAWGFHFITRENKSDNGATPLGNFVRTMDKSWMKKNRLSDDYELGVESFIEFGFHHANGSKVIRCPC
LKCGNRTDKDAATIRNHLYEHGIDPSYRDNLMITQDLEKENVDKDGDLLSIALGNRDQPGLVRAVDIGQGKNFGVQGGNSLSSALGSIDNVVVAGIIFKSGRNDGNVKVS
IDVVVDDDSRLPIPSHARYDILSQKIVRNVFR