CuGenDBv2

Gene ID	Moc03g02700
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	DUF4219 domain-containing protein/UBN2 domain-containing protein
Genome location	chr3:2048007..2048492
RNA-Seq Expression	Moc03g02700
Synteny	Moc03g02700
Gene Ontology terms	GO:0015074 - DNA integration (biological process) GO:0003676 - nucleic acid binding (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_022151329.1 uncharacterized protein LOC111019291 [Momordica charantia]

1.0e-76

91.3

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Query:  MELGSNNLSLLAPPVFDGEIYQTWAIRIQAYMEGCDYWEAIEQDYEISPLPDNPTMHQIKTHKERVTRKAKARTCLYAAVSPTIFNRIMALKSAKEIWEF
        ME GSNNLS LAPPVFDGE YQ W IRIQAYMEGCDYWEAIEQDYEI+PLPDNPTMHQIKTHK RVTRKAKAR CLYAAVSPTIFNRIMALKSAKEIWEF
Subjt:  MELGSNNLSLLAPPVFDGEIYQTWAIRIQAYMEGCDYWEAIEQDYEISPLPDNPTMHQIKTHKERVTRKAKARTCLYAAVSPTIFNRIMALKSAKEIWEF

Query:  LKSEYEGDERIKGMKVLNLVREFERMQMNDFESIKEYSDKLIGIANKSRALVTDLSDNRLV
        LKSEYEGDER KGM VLNLVREFERMQM D ESIKEYSDKLIGIANK+RAL TDLSDNRLV
Subjt:  LKSEYEGDERIKGMKVLNLVREFERMQMNDFESIKEYSDKLIGIANKSRALVTDLSDNRLV

XP_022152365.1 uncharacterized protein LOC111020109 [Momordica charantia]

6.9e-78

91.93

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Query:  MELGSNNLSLLAPPVFDGEIYQTWAIRIQAYMEGCDYWEAIEQDYEISPLPDNPTMHQIKTHKERVTRKAKARTCLYAAVSPTIFNRIMALKSAKEIWEF
        MELGSNNLS LAPPVFDGE YQ WAIRIQAYMEGC+YWEAIEQDYEI+PLPDNPTMHQIKTHKERVTRKAKAR CLYAAVSP IFNRIMALKSAKEIWEF
Subjt:  MELGSNNLSLLAPPVFDGEIYQTWAIRIQAYMEGCDYWEAIEQDYEISPLPDNPTMHQIKTHKERVTRKAKARTCLYAAVSPTIFNRIMALKSAKEIWEF

Query:  LKSEYEGDERIKGMKVLNLVREFERMQMNDFESIKEYSDKLIGIANKSRALVTDLSDNRLV
        LKSEYEGDERIKGMKVLNLVREFERMQM D +SIKEYSDKLIGIANK+RAL TD+SDNRLV
Subjt:  LKSEYEGDERIKGMKVLNLVREFERMQMNDFESIKEYSDKLIGIANKSRALVTDLSDNRLV

XP_022157914.1 uncharacterized protein LOC111024525 [Momordica charantia]

1.5e-85

100

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Query:  MELGSNNLSLLAPPVFDGEIYQTWAIRIQAYMEGCDYWEAIEQDYEISPLPDNPTMHQIKTHKERVTRKAKARTCLYAAVSPTIFNRIMALKSAKEIWEF
        MELGSNNLSLLAPPVFDGEIYQTWAIRIQAYMEGCDYWEAIEQDYEISPLPDNPTMHQIKTHKERVTRKAKARTCLYAAVSPTIFNRIMALKSAKEIWEF
Subjt:  MELGSNNLSLLAPPVFDGEIYQTWAIRIQAYMEGCDYWEAIEQDYEISPLPDNPTMHQIKTHKERVTRKAKARTCLYAAVSPTIFNRIMALKSAKEIWEF

Query:  LKSEYEGDERIKGMKVLNLVREFERMQMNDFESIKEYSDKLIGIANKSRALVTDLSDNRLV
        LKSEYEGDERIKGMKVLNLVREFERMQMNDFESIKEYSDKLIGIANKSRALVTDLSDNRLV
Subjt:  LKSEYEGDERIKGMKVLNLVREFERMQMNDFESIKEYSDKLIGIANKSRALVTDLSDNRLV

XP_022158688.1 uncharacterized protein LOC111025149 [Momordica charantia]

5.3e-78

92.55

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Query:  MELGSNNLSLLAPPVFDGEIYQTWAIRIQAYMEGCDYWEAIEQDYEISPLPDNPTMHQIKTHKERVTRKAKARTCLYAAVSPTIFNRIMALKSAKEIWEF
        MELGSNNLS LAPPVFDGE YQTWAIRIQAYMEGCDYWEAIEQDYEI+PLPDNPTMHQIKTHKERVTRKAKAR CLYAAVSP IFNRIMALKSAKEIWEF
Subjt:  MELGSNNLSLLAPPVFDGEIYQTWAIRIQAYMEGCDYWEAIEQDYEISPLPDNPTMHQIKTHKERVTRKAKARTCLYAAVSPTIFNRIMALKSAKEIWEF

Query:  LKSEYEGDERIKGMKVLNLVREFERMQMNDFESIKEYSDKLIGIANKSRALVTDLSDNRLV
        LKSEYEGDERIKGMKVLNLVREFER+QM D ESIKEYSDKLIGIANK+RAL  DLS+NRLV
Subjt:  LKSEYEGDERIKGMKVLNLVREFERMQMNDFESIKEYSDKLIGIANKSRALVTDLSDNRLV

XP_038889190.1 uncharacterized protein LOC120079069 [Benincasa hispida]

2.8e-71

85.09

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Query:  MELGSNNLSLLAPPVFDGEIYQTWAIRIQAYMEGCDYWEAIEQDYEISPLPDNPTMHQIKTHKERVTRKAKARTCLYAAVSPTIFNRIMALKSAKEIWEF
        ME GSN+LS L P VFDGE YQ WAIR+QAYME CDYWE IEQDYEI+PLPDNPT++QIKTHKERVTRK KAR CLY AVSP IFNRIMALKS KEIWEF
Subjt:  MELGSNNLSLLAPPVFDGEIYQTWAIRIQAYMEGCDYWEAIEQDYEISPLPDNPTMHQIKTHKERVTRKAKARTCLYAAVSPTIFNRIMALKSAKEIWEF

Query:  LKSEYEGDERIKGMKVLNLVREFERMQMNDFESIKEYSDKLIGIANKSRALVTDLSDNRLV
        LKSEYEGDERIKGMKVLNLVREFERMQM D++SIKEYSDKLIGIANK+RAL  DLSDNRLV
Subjt:  LKSEYEGDERIKGMKVLNLVREFERMQMNDFESIKEYSDKLIGIANKSRALVTDLSDNRLV

TrEMBL top hits

e value

%identity

Alignment

A0A1U8PA84 uncharacterized protein LOC107955882

1.0e-63

73.29

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Query:  MELGSNNLSLLAPPVFDGEIYQTWAIRIQAYMEGCDYWEAIEQDYEISPLPDNPTMHQIKTHKERVTRKAKARTCLYAAVSPTIFNRIMALKSAKEIWEF
        ME GS+NLS+LAPPVFDGE YQ WA+R+QAYMEGCDYWE IE+DYE++PLP NPTM+QIK H ER TRK KAR+CLYA+VSP IFNRIMA  S KEIW++
Subjt:  MELGSNNLSLLAPPVFDGEIYQTWAIRIQAYMEGCDYWEAIEQDYEISPLPDNPTMHQIKTHKERVTRKAKARTCLYAAVSPTIFNRIMALKSAKEIWEF

Query:  LKSEYEGDERIKGMKVLNLVREFERMQMNDFESIKEYSDKLIGIANKSRALVTDLSDNRLV
        LK +Y+GDERIK MKVLNL+REFER+Q+ + +SIKEYSDKLI IANK R L  DLSD++LV
Subjt:  LKSEYEGDERIKGMKVLNLVREFERMQMNDFESIKEYSDKLIGIANKSRALVTDLSDNRLV

A0A6J1DCR7 uncharacterized protein LOC111019291

4.8e-77

91.3

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Query:  MELGSNNLSLLAPPVFDGEIYQTWAIRIQAYMEGCDYWEAIEQDYEISPLPDNPTMHQIKTHKERVTRKAKARTCLYAAVSPTIFNRIMALKSAKEIWEF
        ME GSNNLS LAPPVFDGE YQ W IRIQAYMEGCDYWEAIEQDYEI+PLPDNPTMHQIKTHK RVTRKAKAR CLYAAVSPTIFNRIMALKSAKEIWEF
Subjt:  MELGSNNLSLLAPPVFDGEIYQTWAIRIQAYMEGCDYWEAIEQDYEISPLPDNPTMHQIKTHKERVTRKAKARTCLYAAVSPTIFNRIMALKSAKEIWEF

Query:  LKSEYEGDERIKGMKVLNLVREFERMQMNDFESIKEYSDKLIGIANKSRALVTDLSDNRLV
        LKSEYEGDER KGM VLNLVREFERMQM D ESIKEYSDKLIGIANK+RAL TDLSDNRLV
Subjt:  LKSEYEGDERIKGMKVLNLVREFERMQMNDFESIKEYSDKLIGIANKSRALVTDLSDNRLV

A0A6J1DDR0 uncharacterized protein LOC111020109

3.4e-78

91.93

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Query:  MELGSNNLSLLAPPVFDGEIYQTWAIRIQAYMEGCDYWEAIEQDYEISPLPDNPTMHQIKTHKERVTRKAKARTCLYAAVSPTIFNRIMALKSAKEIWEF
        MELGSNNLS LAPPVFDGE YQ WAIRIQAYMEGC+YWEAIEQDYEI+PLPDNPTMHQIKTHKERVTRKAKAR CLYAAVSP IFNRIMALKSAKEIWEF
Subjt:  MELGSNNLSLLAPPVFDGEIYQTWAIRIQAYMEGCDYWEAIEQDYEISPLPDNPTMHQIKTHKERVTRKAKARTCLYAAVSPTIFNRIMALKSAKEIWEF

Query:  LKSEYEGDERIKGMKVLNLVREFERMQMNDFESIKEYSDKLIGIANKSRALVTDLSDNRLV
        LKSEYEGDERIKGMKVLNLVREFERMQM D +SIKEYSDKLIGIANK+RAL TD+SDNRLV
Subjt:  LKSEYEGDERIKGMKVLNLVREFERMQMNDFESIKEYSDKLIGIANKSRALVTDLSDNRLV

A0A6J1DWT9 uncharacterized protein LOC111025149

2.6e-78

92.55

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Query:  MELGSNNLSLLAPPVFDGEIYQTWAIRIQAYMEGCDYWEAIEQDYEISPLPDNPTMHQIKTHKERVTRKAKARTCLYAAVSPTIFNRIMALKSAKEIWEF
        MELGSNNLS LAPPVFDGE YQTWAIRIQAYMEGCDYWEAIEQDYEI+PLPDNPTMHQIKTHKERVTRKAKAR CLYAAVSP IFNRIMALKSAKEIWEF
Subjt:  MELGSNNLSLLAPPVFDGEIYQTWAIRIQAYMEGCDYWEAIEQDYEISPLPDNPTMHQIKTHKERVTRKAKARTCLYAAVSPTIFNRIMALKSAKEIWEF

Query:  LKSEYEGDERIKGMKVLNLVREFERMQMNDFESIKEYSDKLIGIANKSRALVTDLSDNRLV
        LKSEYEGDERIKGMKVLNLVREFER+QM D ESIKEYSDKLIGIANK+RAL  DLS+NRLV
Subjt:  LKSEYEGDERIKGMKVLNLVREFERMQMNDFESIKEYSDKLIGIANKSRALVTDLSDNRLV

A0A6J1DXX3 uncharacterized protein LOC111024525

7.5e-86

100

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Query:  MELGSNNLSLLAPPVFDGEIYQTWAIRIQAYMEGCDYWEAIEQDYEISPLPDNPTMHQIKTHKERVTRKAKARTCLYAAVSPTIFNRIMALKSAKEIWEF
        MELGSNNLSLLAPPVFDGEIYQTWAIRIQAYMEGCDYWEAIEQDYEISPLPDNPTMHQIKTHKERVTRKAKARTCLYAAVSPTIFNRIMALKSAKEIWEF
Subjt:  MELGSNNLSLLAPPVFDGEIYQTWAIRIQAYMEGCDYWEAIEQDYEISPLPDNPTMHQIKTHKERVTRKAKARTCLYAAVSPTIFNRIMALKSAKEIWEF

Query:  LKSEYEGDERIKGMKVLNLVREFERMQMNDFESIKEYSDKLIGIANKSRALVTDLSDNRLV
        LKSEYEGDERIKGMKVLNLVREFERMQMNDFESIKEYSDKLIGIANKSRALVTDLSDNRLV
Subjt:  LKSEYEGDERIKGMKVLNLVREFERMQMNDFESIKEYSDKLIGIANKSRALVTDLSDNRLV

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G21000.1 Gag-Pol-related retrotransposon family protein

1.3e-05

22.07

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Query:  YQTWAIRIQAYMEGCDYWEAIEQDYEISPLPDNPTM------HQIKTHKERVTRKAKARTCLYAAVSPTIFNRIMALKSAKEIWEFLK--SEYEGDERIK
        Y+ WA   ++ +     W+ +       P   NP +       ++   ++ V + AKA   L ++++ ++F + ++  SAK++W+ L+  +E     R++
Subjt:  YQTWAIRIQAYMEGCDYWEAIEQDYEISPLPDNPTM------HQIKTHKERVTRKAKARTCLYAAVSPTIFNRIMALKSAKEIWEFLK--SEYEGDERIK

Query:  GMKVLNLVREFERMQMNDFESIKEYSDKLIGIANKSRALVTDLSD
         + +  L ++ E ++M D ES   Y DK + I  +      + SD
Subjt:  GMKVLNLVREFERMQMNDFESIKEYSDKLIGIANKSRALVTDLSD

Sequences

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CDS sequence

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ATGGAGCTAGGATCAAACAATCTTTCTTTACTGGCTCCACCTGTGTTTGATGGTGAAATCTATCAAACATGGGCAATCAGAATACAAGCTTACATGGAAGGTTGTGATTA
TTGGGAAGCAATTGAGCAAGATTATGAAATTTCTCCACTTCCTGATAATCCAACGATGCATCAGATCAAGACTCACAAGGAGAGGGTCACCAGGAAGGCAAAGGCTCGAA
CTTGCCTATATGCAGCTGTGTCTCCCACCATATTTAATAGAATTATGGCATTGAAGTCAGCAAAGGAGATCTGGGAGTTCCTCAAAAGTGAGTATGAAGGTGATGAGAGG
ATTAAAGGCATGAAGGTGTTGAACTTGGTAAGGGAATTCGAGAGAATGCAGATGAATGATTTTGAGTCCATCAAAGAGTATTCAGACAAGTTGATCGGGATTGCTAACAA
GTCAAGAGCATTAGTAACTGATCTATCTGACAATAGATTGGTTTAG

mRNA sequence

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Protein sequence

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MELGSNNLSLLAPPVFDGEIYQTWAIRIQAYMEGCDYWEAIEQDYEISPLPDNPTMHQIKTHKERVTRKAKARTCLYAAVSPTIFNRIMALKSAKEIWEFLKSEYEGDER
IKGMKVLNLVREFERMQMNDFESIKEYSDKLIGIANKSRALVTDLSDNRLV

Moc03g02700 (gene) of Bitter gourd (OHB3-1) v2 genome