; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc03g03210 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g03210
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionIntegrase catalytic domain-containing protein
Genome locationchr3:2452565..2457192
RNA-Seq ExpressionMoc03g03210
SyntenyMoc03g03210
Gene Ontology termsNA
InterPro domainsIPR025724 - GAG-pre-integrase domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA8524269.1 hypothetical protein F0562_010692 [Nyssa sinensis]6.5e-4828.79Show/hide
Query:  GSTPKPVEFLVSSSDSSSSAPPAANPAFSEWIAKDHVLMTLLNAILSPLALAYVVGCDSSQQVWQTLVKHYSSSSRTNV---------------------
        G+ P P +F+    D   +A    NP +  W  +D  LMTLLNA LS  AL++V+G  +S++ W  L + +S+S+R+N+                     
Subjt:  GSTPKPVEFLVSSSDSSSSAPPAANPAFSEWIAKDHVLMTLLNAILSPLALAYVVGCDSSQQVWQTLVKHYSSSSRTNV---------------------

Query:  -------DKLANVSVLVDNEDLLIYTLNGLLPEFNAFRTSMRTRSQSVSFEELHVLLVYEEAAIDKQTKRDEVFVQSSTLLANMATKDQNSNPNISCGRG
               D LA+VSVL+++ED+LIY LNGL  E+NAF+TS+RT+S++++ EE++ +L  EE  I+   K++        ++A       N  PN S  RG
Subjt:  -------DKLANVSVLVDNEDLLIYTLNGLLPEFNAFRTSMRTRSQSVSFEELHVLLVYEEAAIDKQTKRDEVFVQSSTLLANMATKDQNSNPNISCGRG

Query:  FN-------GGGKGKFPNPNNR---------------------------------------------------------------------SKMASLSTT
        ++       G G+G+F N   R                                                                     + M++   T
Subjt:  FN-------GGGKGKFPNPNNR---------------------------------------------------------------------SKMASLSTT

Query:  G------------GRSRDSSGTAVPFGIQPNWSADEQITVGNGHSLPITHSGSGLLHTSSSSLVLKHLSYSPDISSNLISVYRLCLDNDCSITFNANQFL
        G            G +   +           +  D+ IT+ NG +L I+HSG   +H +  +  L ++   P +++NL+SV++ C DN C   F++  F 
Subjt:  G------------GRSRDSSGTAVPFGIQPNWSADEQITVGNGHSLPITHSGSGLLHTSSSSLVLKHLSYSPDISSNLISVYRLCLDNDCSITFNANQFL

Query:  IQDNSSGQILFQDPSINGLYPI-------HSAIL---PSHDQILSRH----------------NVAHVGARTSSSVWHDRLGHPSESVLASVLCSMNLSS
        IQD ++ Q+LFQ PS +GLYP+       HSA     P H Q  ++H                + A++G + S+ +WHDRLGHPS + L S+L S ++++
Subjt:  IQDNSSGQILFQDPSINGLYPI-------HSAIL---PSHDQILSRH----------------NVAHVGARTSSSVWHDRLGHPSESVLASVLCSMNLSS

Query:  YTTSKCVCIHCLHGKMHRLSFPQSVTVS
           S  +C HCL GKM +L FP S T S
Subjt:  YTTSKCVCIHCLHGKMHRLSFPQSVTVS

PKU76715.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Dendrobium catenatum]2.1e-3828.66Show/hide
Query:  GSTPKPVEFLVSSSDSSSSAPPAANPAFSEWIAKDHVLMTLLNAILSPLALAYVVGCDSSQQVWQTLVKHYSSSSR------------------------
        GS+  P + ++S++  S       NPA++ WI  D  L   L +++SP  L YV+  +   ++W  L +   SS+R                        
Subjt:  GSTPKPVEFLVSSSDSSSSAPPAANPAFSEWIAKDHVLMTLLNAILSPLALAYVVGCDSSQQVWQTLVKHYSSSSR------------------------

Query:  ----TNVDKLANVSVLVDNEDLLIYTLNGLLPEFNAFRTSMRTRSQSVSFEELHVLLVYEEAAIDKQTKRDEVFVQ---SSTLLANMATKDQ-NSNPNIS
            + VD LA     +  E+++ YTL+GL   + +F+TS+RT  Q +S ++L+ LL  EE  +  +T R+   +Q   +ST LA  AT+ +     N S
Subjt:  ----TNVDKLANVSVLVDNEDLLIYTLNGLLPEFNAFRTSMRTRSQSVSFEELHVLLVYEEAAIDKQTKRDEVFVQ---SSTLLANMATKDQ-NSNPNIS

Query:  CGRGFNGGGKGKFPNPNNRSKMASLS---------------------------TT-----------------GGRSRDSSGTAVPFGIQPNWSADEQITV
         GR +         N   R   ++++                           TT                  G S   +          +++   Q+TV
Subjt:  CGRGFNGGGKGKFPNPNNRSKMASLS---------------------------TT-----------------GGRSRDSSGTAVPFGIQPNWSADEQITV

Query:  GNGHSLPITHSGSGLLHTSSSSLVLKHLSYSPDISSNLISVYRLCLDNDCSITFNANQFLIQDNSSGQILFQDPSINGLYPIHSAILPSHDQILSRHNVA
        GNG  L I ++G GLL T   SL L  L++ P++S NL+SVY+L  DNDC+ITF+++ + I+D +S  IL   P INGLYP+     P  +++     +A
Subjt:  GNGHSLPITHSGSGLLHTSSSSLVLKHLSYSPDISSNLISVYRLCLDNDCSITFNANQFLIQDNSSGQILFQDPSINGLYPIHSAILPSHDQILSRHNVA

Query:  HVGARTSSSVWHDRLGHPSESVLASVLCSMNLSSYTTSKCVCIHCLHGKMHRLSFPQSVTVSLF
         +  +T S++WH RLGHPS + LA++     +    +    C  C  GK HRL F +S+  S F
Subjt:  HVGARTSSSVWHDRLGHPSESVLASVLCSMNLSSYTTSKCVCIHCLHGKMHRLSFPQSVTVSLF

XP_022158378.1 uncharacterized protein LOC111024876 [Momordica charantia]1.4e-4259.46Show/hide
Query:  KPVEFLVSS----SDSSSSAPPAANPAFSEWIAKDHVLMTLLNAILSPLALAYVVGCDSSQQVWQTLVKHYSSSSRTNVDKLANVSVLVDNEDLLIYTLN
        KP +FL SS    +DS S+     +PAF +WIAKDH LMTL+NA LS  ALAYVVGC SSQQVW+TL   Y    +   DKLANVSVLVD+EDL+IYTLN
Subjt:  KPVEFLVSS----SDSSSSAPPAANPAFSEWIAKDHVLMTLLNAILSPLALAYVVGCDSSQQVWQTLVKHYSSSSRTNVDKLANVSVLVDNEDLLIYTLN

Query:  GLLPEFNAFRTSMRTRSQSVSFEELHVLLVYEEAAIDKQTKRDEVFVQSSTLLANMAT----KDQNSNPNISCGRGFNGGGKGKF
        GL  EFN FRTSMRTRS+ +SF ELHVLL  E  AIDKQ+K D++FVQ + L+ N  +    ++QN NPN + GR  N GGK KF
Subjt:  GLLPEFNAFRTSMRTRSQSVSFEELHVLLVYEEAAIDKQTKRDEVFVQSSTLLANMAT----KDQNSNPNISCGRGFNGGGKGKF

XP_022158689.1 uncharacterized protein LOC111025150 [Momordica charantia]6.0e-5462.16Show/hide
Query:  MADSSQPPKDLSSSISCY-------------------------------------GSTPKPVEFLVSSSDSSSSAPPAANPAFSEWIAKDHVLMTLLNAI
        MADSSQPPKDLSS I                                        GSTPKP EFLVS  D SSS PPAANPAFSEWIAKDH LMTLLNA 
Subjt:  MADSSQPPKDLSSSISCY-------------------------------------GSTPKPVEFLVSSSDSSSSAPPAANPAFSEWIAKDHVLMTLLNAI

Query:  LSPLALAYVVGCDSSQQVWQTLVKHYSSSSRTNV-----------------------------DKLANVSVLVDNEDLLIYTLNGLLPEFNAFRTSMRTR
        LS  ALAYVVGCDSSQQVWQTLVKHYSSSSRTNV                             DKLANV VLVDNEDLLIYTLN L PEFN FRTSMRTR
Subjt:  LSPLALAYVVGCDSSQQVWQTLVKHYSSSSRTNV-----------------------------DKLANVSVLVDNEDLLIYTLNGLLPEFNAFRTSMRTR

Query:  SQSVSFEELHVLLVYEEAAIDK
        SQSVSFEELHVLLV EEAAIDK
Subjt:  SQSVSFEELHVLLVYEEAAIDK

XP_022159298.1 uncharacterized protein LOC111025709 [Momordica charantia]1.9e-8774.7Show/hide
Query:  GSTPKPVEFLVSSSDSSSSAPPAANPAFSEWIAKDHVLMTLLNAILSPLALAYVVGCDSSQQVWQTLVKHYSSSSRTNV---------------------
        GSTPKP +FLVSSSDS SS  P  NPAFS+WIAKDH LMTLLNA LSP ALAY+VGCDSSQQVWQTLVK+YSSSSRTNV                     
Subjt:  GSTPKPVEFLVSSSDSSSSAPPAANPAFSEWIAKDHVLMTLLNAILSPLALAYVVGCDSSQQVWQTLVKHYSSSSRTNV---------------------

Query:  --------DKLANVSVLVDNEDLLIYTLNGLLPEFNAFRTSMRTRSQSVSFEELHVLLVYEEAAIDKQTKRDEVFVQSSTLLANMATKDQNSNPNISCGR
                DKLANVSVLVDNEDLLIYTLNGL PEFNAF TSM TRSQSVSFEEL+VLLVYEEAAIDKQTK DEVFVQSSTLLANMATK QNSNPNI   R
Subjt:  --------DKLANVSVLVDNEDLLIYTLNGLLPEFNAFRTSMRTRSQSVSFEELHVLLVYEEAAIDKQTKRDEVFVQSSTLLANMATKDQNSNPNISCGR

Query:  GFNGGGKGKFPNPNNRSKMASLSTTGGRSRDSSGTAVPFGIQPNWSADE
        GFNGGGKGKFPNPNNRSK++SL TTGGRSR  SGTA+PF IQ N S+ +
Subjt:  GFNGGGKGKFPNPNNRSKMASLSTTGGRSRDSSGTAVPFGIQPNWSADE

TrEMBL top hitse value%identityAlignment
A0A2N9GWG5 Uncharacterized protein2.0e-5534.19Show/hide
Query:  GSTPKPVEFLVSSSDSSSSAPPAANPAFSEWIAKDHVLMTLLNAILSPLALAYVVGCDSSQQVWQTLVKHYSSSSRTNV---------------------
        G+ P P ++L   +D +       N  + +W A+D  L TL+NA LSP A+  V+G  ++Q VWQ L + Y+S SRT++                     
Subjt:  GSTPKPVEFLVSSSDSSSSAPPAANPAFSEWIAKDHVLMTLLNAILSPLALAYVVGCDSSQQVWQTLVKHYSSSSRTNV---------------------

Query:  --------DKLANVSVLVDNEDLLIYTLNGLLPEFNAFRTSMRTRSQSVSFEELHVLLVYEEAAID--KQTKRDEVFVQSSTLLANMATKDQNSN-PNIS
                DKL +V V+VD+EDLL   L GL  E++ F ++MRTR +++S EELHVLL  EE +    K    D+  +  +   +   T   N+  P +S
Subjt:  --------DKLANVSVLVDNEDLLIYTLNGLLPEFNAFRTSMRTRSQSVSFEELHVLLVYEEAAID--KQTKRDEVFVQSSTLLANMATKDQNSN-PNIS

Query:  CGRGFNGGGKGKFPNPNNR--------------------------SKMASLSTTGGRSRDSSGTAVPFGIQPNWSAD-----------------------
               GG+G    P  +                          +K+A++++T      SS    P+  Q +W +D                       
Subjt:  CGRGFNGGGKGKFPNPNNR--------------------------SKMASLSTTGGRSRDSSGTAVPFGIQPNWSAD-----------------------

Query:  EQITVGNGHSLPITHSGSGLLHTSSSSLVLKHLSYSPDISSNLISVYRLCLDNDCSITFNANQFLIQDNSSGQILFQDPSINGLYPIHSAILPSHDQILS
        +Q+TVGNG SLPITH+G+  L+ SS    L+ + + P +SSNL+SV+R C DN+ S  F+A++F I+D SSG++L+  PS +GLYPIH AILP+     S
Subjt:  EQITVGNGHSLPITHSGSGLLHTSSSSLVLKHLSYSPDISSNLISVYRLCLDNDCSITFNANQFLIQDNSSGQILFQDPSINGLYPIHSAILPSHDQILS

Query:  RHNVAHVGARTSSS-VWHDRLGHPSESVLASVLCSMNLSSYTTSKCVCIHCLHGKMHRLSFPQSVTVS
           + H  A +SSS +WH+RLGHP +SV+  VL +      + +  +CIHCL GKMH+L FP SV+++
Subjt:  RHNVAHVGARTSSS-VWHDRLGHPSESVLASVLCSMNLSSYTTSKCVCIHCLHGKMHRLSFPQSVTVS

A0A2N9HH98 Uncharacterized protein1.2e-5535.51Show/hide
Query:  GSTPKPVEFLVSSSDSSSSAPPAANPAFSEWIAKDHVLMTLLNAILSPLALAYVVGCDSSQQVWQTLVKHYSSSSRTNV---------------------
        G+ P P ++L   +D +       N  + +W A+D  L TL+NA LSP A+  V+G  ++Q VWQ L + Y+S SRT++                     
Subjt:  GSTPKPVEFLVSSSDSSSSAPPAANPAFSEWIAKDHVLMTLLNAILSPLALAYVVGCDSSQQVWQTLVKHYSSSSRTNV---------------------

Query:  --------DKLANVSVLVDNEDLLIYTLNGLLPEFNAFRTSMRTRSQSVSFEELHVLLVYEEAAID--KQTKRDEVFVQSSTLLANMATKDQNSN-PNIS
                DKL +V V+VD+EDLL   L GL  E++ F ++MRTR +++S EELHVLL  EE +    K    D+  +  +   +   T   N+  P +S
Subjt:  --------DKLANVSVLVDNEDLLIYTLNGLLPEFNAFRTSMRTRSQSVSFEELHVLLVYEEAAID--KQTKRDEVFVQSSTLLANMATKDQNSN-PNIS

Query:  CGRGFNGGGKGKFPNPNNR--------------------------SKMASLSTTGGRSRDSSGTAVPFGIQPNWSADEQITVGNGHSLPITHSGSGLLHT
               GG+G    P  +                          +K+A++++T      SS    P+  Q      +Q+TVGNG SLPITH+G+  L+ 
Subjt:  CGRGFNGGGKGKFPNPNNR--------------------------SKMASLSTTGGRSRDSSGTAVPFGIQPNWSADEQITVGNGHSLPITHSGSGLLHT

Query:  SSSSLVLKHLSYSPDISSNLISVYRLCLDNDCSITFNANQFLIQDNSSGQILFQDPSINGLYPIHSAILPSHDQILSRHNVAHVGARTSSS-VWHDRLGH
        SS    L+ + + P +SSNL+SV+R C DN+ S  F+A++F I+D SSG++L+  PS +GLYPIH AILP+     S   + H  A +SSS +WH+RLGH
Subjt:  SSSSLVLKHLSYSPDISSNLISVYRLCLDNDCSITFNANQFLIQDNSSGQILFQDPSINGLYPIHSAILPSHDQILSRHNVAHVGARTSSS-VWHDRLGH

Query:  PSESVLASVLCSMNLSSYTTSKCVCIHCLHGKMHRLSFPQSVTVS
        P +SV+  VL +      + +  +CIHCL GKMH+L FP SV+++
Subjt:  PSESVLASVLCSMNLSSYTTSKCVCIHCLHGKMHRLSFPQSVTVS

A0A2N9HIU2 Uncharacterized protein2.9e-5437.11Show/hide
Query:  GSTPKPVEFLVSSSDSSSSAPPAANPAFSEWIAKDHVLMTLLNAILSPLALAYVVGCDSSQQVWQTLVKHYSSSSRTNVDKLANVSVLVDNEDLLIYTLN
        G+ P P ++L   +D +       N  + +W A+D  L TL+NA LSP A+  V+G  ++Q VWQ L        R + DKL +V V+VD+EDLL   L 
Subjt:  GSTPKPVEFLVSSSDSSSSAPPAANPAFSEWIAKDHVLMTLLNAILSPLALAYVVGCDSSQQVWQTLVKHYSSSSRTNVDKLANVSVLVDNEDLLIYTLN

Query:  GLLPEFNAFRTSMRTRSQSVSFEELHVLLVYEEAAIDKQTKRDEVFVQSSTLLANMATKDQNSNPNISCGRGFNGGG-----KGKFPNPNNRSKMASLST
        GL  E++ F ++MRTR +++S EELHVLL  EE +  K+  +     Q    +A   ++     P I C    + G      +G+ P     +K+A++++
Subjt:  GLLPEFNAFRTSMRTRSQSVSFEELHVLLVYEEAAIDKQTKRDEVFVQSSTLLANMATKDQNSNPNISCGRGFNGGG-----KGKFPNPNNRSKMASLST

Query:  TGGRSRDSSGTAVPFGIQPNWSAD-----------------------EQITVGNGHSLPITHSGSGLLHTSSSSLVLKHLSYSPDISSNLISVYRLCLDN
        T      SS    P+  Q +W +D                       +Q+TVGNG SLPITH+G+  L+ SS    L+ + + P +SSNL+SV+R C DN
Subjt:  TGGRSRDSSGTAVPFGIQPNWSAD-----------------------EQITVGNGHSLPITHSGSGLLHTSSSSLVLKHLSYSPDISSNLISVYRLCLDN

Query:  DCSITFNANQFLIQDNSSGQILFQDPSINGLYPIHSAILPSHDQILSRHNVAHVGARTSSS-VWHDRLGHPSESVLASVLCSMNLSSYTTSKCVCIHCLH
        + S  F+A++F I+D SSG++L+  PS +GLYPIH AILP+     S   + H  A +SSS +WH+RLGHP +SV+  VL +      + +  +CIHCL 
Subjt:  DCSITFNANQFLIQDNSSGQILFQDPSINGLYPIHSAILPSHDQILSRHNVAHVGARTSSS-VWHDRLGHPSESVLASVLCSMNLSSYTTSKCVCIHCLH

Query:  GKMHRLSFPQSVTVS
        GKMH+L FP  V+++
Subjt:  GKMHRLSFPQSVTVS

A0A6J1DYF1 uncharacterized protein LOC1110257099.0e-8874.7Show/hide
Query:  GSTPKPVEFLVSSSDSSSSAPPAANPAFSEWIAKDHVLMTLLNAILSPLALAYVVGCDSSQQVWQTLVKHYSSSSRTNV---------------------
        GSTPKP +FLVSSSDS SS  P  NPAFS+WIAKDH LMTLLNA LSP ALAY+VGCDSSQQVWQTLVK+YSSSSRTNV                     
Subjt:  GSTPKPVEFLVSSSDSSSSAPPAANPAFSEWIAKDHVLMTLLNAILSPLALAYVVGCDSSQQVWQTLVKHYSSSSRTNV---------------------

Query:  --------DKLANVSVLVDNEDLLIYTLNGLLPEFNAFRTSMRTRSQSVSFEELHVLLVYEEAAIDKQTKRDEVFVQSSTLLANMATKDQNSNPNISCGR
                DKLANVSVLVDNEDLLIYTLNGL PEFNAF TSM TRSQSVSFEEL+VLLVYEEAAIDKQTK DEVFVQSSTLLANMATK QNSNPNI   R
Subjt:  --------DKLANVSVLVDNEDLLIYTLNGLLPEFNAFRTSMRTRSQSVSFEELHVLLVYEEAAIDKQTKRDEVFVQSSTLLANMATKDQNSNPNISCGR

Query:  GFNGGGKGKFPNPNNRSKMASLSTTGGRSRDSSGTAVPFGIQPNWSADE
        GFNGGGKGKFPNPNNRSK++SL TTGGRSR  SGTA+PF IQ N S+ +
Subjt:  GFNGGGKGKFPNPNNRSKMASLSTTGGRSRDSSGTAVPFGIQPNWSADE

A0A6J1E049 uncharacterized protein LOC1110251502.9e-5462.16Show/hide
Query:  MADSSQPPKDLSSSISCY-------------------------------------GSTPKPVEFLVSSSDSSSSAPPAANPAFSEWIAKDHVLMTLLNAI
        MADSSQPPKDLSS I                                        GSTPKP EFLVS  D SSS PPAANPAFSEWIAKDH LMTLLNA 
Subjt:  MADSSQPPKDLSSSISCY-------------------------------------GSTPKPVEFLVSSSDSSSSAPPAANPAFSEWIAKDHVLMTLLNAI

Query:  LSPLALAYVVGCDSSQQVWQTLVKHYSSSSRTNV-----------------------------DKLANVSVLVDNEDLLIYTLNGLLPEFNAFRTSMRTR
        LS  ALAYVVGCDSSQQVWQTLVKHYSSSSRTNV                             DKLANV VLVDNEDLLIYTLN L PEFN FRTSMRTR
Subjt:  LSPLALAYVVGCDSSQQVWQTLVKHYSSSSRTNV-----------------------------DKLANVSVLVDNEDLLIYTLNGLLPEFNAFRTSMRTR

Query:  SQSVSFEELHVLLVYEEAAIDK
        SQSVSFEELHVLLV EEAAIDK
Subjt:  SQSVSFEELHVLLVYEEAAIDK

SwissProt top hitse value%identityAlignment
Q94HW2 Retrovirus-related Pol polyprotein from transposon RE14.0e-1635.08Show/hide
Query:  WSADEQITVGNGHSLPITHSGSGLLHTSSSSLVLKHLSYSPDISSNLISVYRLCLDNDCSITFNANQFLIQDNSSGQILFQDPSINGLY--PIHSAILPS
        ++  + + V +G ++PI+H+GS  L T S  L L ++ Y P+I  NLISVYRLC  N  S+ F    F ++D ++G  L Q  + + LY  PI S+    
Subjt:  WSADEQITVGNGHSLPITHSGSGLLHTSSSSLVLKHLSYSPDISSNLISVYRLCLDNDCSITFNANQFLIQDNSSGQILFQDPSINGLY--PIHSAILPS

Query:  HDQILSRHNVAHVGARTSSSVWHDRLGHPSESVLASVLCSMNLSSYTTSK--CVCIHCLHGKMHRLSFPQSVTVSL--FGMLSSKVCATPI
          Q +S    A   ++ + S WH RLGHP+ S+L SV+ + +LS    S     C  CL  K +++ F QS   S      + S V ++PI
Subjt:  HDQILSRHNVAHVGARTSSSVWHDRLGHPSESVLASVLCSMNLSSYTTSK--CVCIHCLHGKMHRLSFPQSVTVSL--FGMLSSKVCATPI

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE22.0e-2025.37Show/hide
Query:  GSTPKPVEFLVSSSDSSSSAPPAANPAFSEWIAKDHVLMTLLNAILSPLALAYVVGCDSSQQVWQTLVKHYSSSSR---------TNVDKLANVSVLVDN
        GSTP P       +   + A P  NP ++ W  +D ++ + +   +S      V    ++ Q+W+TL K Y++ S          T  D+LA +   +D+
Subjt:  GSTPKPVEFLVSSSDSSSSAPPAANPAFSEWIAKDHVLMTLLNAILSPLALAYVVGCDSSQQVWQTLVKHYSSSSR---------TNVDKLANVSVLVDN

Query:  EDLLIYTLNGLLPEFNAFRTSMRTRSQSVSFEELHVLLVYEEAAIDKQTKRDEVFVQSSTLLANMAT-KDQNSNPNISCGRGFNGGGKGKFPNPNNRSKM
        ++ +   L  L  ++      +  +    S  E+H  L+  E+ +      + V      + AN+ T ++ N+N N +     N G    + N NNRS  
Subjt:  EDLLIYTLNGLLPEFNAFRTSMRTRSQSVSFEELHVLLVYEEAAIDKQTKRDEVFVQSSTLLANMAT-KDQNSNPNISCGRGFNGGGKGKFPNPNNRSKM

Query:  ASLSTTGGRS-------------------------------------RDSSGTAVPFGIQP-------------NWSAD---------------------
           S++G RS                                     + S+    P+  QP             NW  D                     
Subjt:  ASLSTTGGRS-------------------------------------RDSSGTAVPFGIQP-------------NWSAD---------------------

Query:  --EQITVGNGHSLPITHSGSGLLHTSSSSLVLKHLSYSPDISSNLISVYRLCLDNDCSITFNANQFLIQDNSSGQILFQDPSINGLY--PIHSAILPSHD
          + + + +G ++PITH+GS  L TSS SL L  + Y P+I  NLISVYRLC  N  S+ F    F ++D ++G  L Q  + + LY  PI S+      
Subjt:  --EQITVGNGHSLPITHSGSGLLHTSSSSLVLKHLSYSPDISSNLISVYRLCLDNDCSITFNANQFLIQDNSSGQILFQDPSINGLY--PIHSAILPSHD

Query:  QILSRHNVAHVGARTSSSVWHDRLGHPSESVLASVLCSMNLSSYTTSKCV--CIHCLHGKMHRLSFPQSVTVS
        Q +S    A   ++ + S WH RLGHPS ++L SV+ + +L     S  +  C  C   K H++ F  S   S
Subjt:  QILSRHNVAHVGARTSSSVWHDRLGHPSESVLASVLCSMNLSSYTTSKCV--CIHCLHGKMHRLSFPQSVTVS

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGATTCTTCGCAACCACCTAAAGATCTTTCATCTTCAATTTCTTGCTATGGATCGACACCAAAACCTGTTGAGTTCTTGGTTTCGTCTTCAGATAGTTCGTCATC
TGCTCCGCCTGCTGCGAATCCGGCTTTTAGCGAGTGGATCGCCAAAGATCATGTTCTCATGACTCTTCTGAATGCTATTCTGTCACCATTGGCTCTTGCGTATGTGGTTG
GATGTGATTCGTCTCAACAGGTTTGGCAAACCTTGGTGAAGCACTATTCATCCTCGTCCAGAACAAATGTGGACAAACTTGCAAATGTATCTGTTCTTGTTGACAATGAA
GATCTGCTCATCTACACTCTCAATGGTTTACTACCCGAATTCAATGCGTTTCGTACTTCGATGCGTACTCGCTCTCAATCGGTATCATTTGAAGAGCTTCATGTCCTGTT
AGTTTATGAGGAAGCAGCAATTGATAAACAGACCAAGCGCGATGAAGTCTTTGTTCAGTCTTCTACTCTTCTTGCGAACATGGCTACGAAAGATCAGAATTCTAATCCTA
ATATTTCGTGCGGTCGAGGTTTCAATGGTGGTGGTAAAGGGAAATTCCCTAACCCTAATAATCGATCCAAAATGGCCTCTCTGAGTACCACTGGTGGTAGAAGCCGTGAT
TCTTCAGGAACTGCTGTACCATTTGGAATTCAACCGAATTGGTCTGCTGATGAGCAAATTACTGTGGGCAATGGTCATTCTTTACCCATAACTCATTCAGGTTCTGGTCT
TTTACACACTTCTTCTTCCTCACTTGTTCTCAAACATCTTTCTTACTCACCTGATATTTCGTCCAATTTAATTTCTGTCTATCGACTTTGCCTTGATAACGATTGTTCCA
TAACCTTTAATGCTAATCAGTTTCTCATTCAAGACAACTCTTCGGGCCAGATTCTCTTTCAAGACCCCAGTATTAATGGGCTCTATCCCATTCACTCTGCTATACTTCCA
TCACATGATCAAATTCTATCTCGGCATAATGTTGCTCATGTTGGAGCTCGCACGTCCTCTTCAGTTTGGCACGATAGACTAGGTCATCCTAGTGAGTCTGTTCTTGCCTC
TGTTCTTTGTTCTATGAATCTATCATCATATACTACTTCTAAATGTGTTTGTATACACTGTCTTCATGGTAAAATGCATAGGCTATCTTTTCCTCAGTCAGTTACTGTTT
CATTGTTTGGTATGCTGAGTTCCAAGGTCTGTGCTACACCCATTGCACTTACTTCATCTGCTGTTGATACTAATCCTTGCTCTGATACCATGTTACAATCTTCCAAAATA
AGGAAGTGCTCTTCTCTTCCATTAATAAAAATGATCAAAATCCTCCATAGGATCAAAATCCAGTCAGAGGTCGATCAAGATCATCATCAAGCCAGAGGCCAATCAAAGCC
AGAGGCCAATCAAAGCCAGAGGCCAATCAAGATCATCATCAAGTCAGAAGCTGATAAGATCAACATCAAGCCAGAGGCCGATCAATATCATCATCAAGTCGCCAATACGC
TAATCAAGATCAACATGCTGCCAAGAGGCCGATCCAGATCAACACGCCGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGATTCTTCGCAACCACCTAAAGATCTTTCATCTTCAATTTCTTGCTATGGATCGACACCAAAACCTGTTGAGTTCTTGGTTTCGTCTTCAGATAGTTCGTCATC
TGCTCCGCCTGCTGCGAATCCGGCTTTTAGCGAGTGGATCGCCAAAGATCATGTTCTCATGACTCTTCTGAATGCTATTCTGTCACCATTGGCTCTTGCGTATGTGGTTG
GATGTGATTCGTCTCAACAGGTTTGGCAAACCTTGGTGAAGCACTATTCATCCTCGTCCAGAACAAATGTGGACAAACTTGCAAATGTATCTGTTCTTGTTGACAATGAA
GATCTGCTCATCTACACTCTCAATGGTTTACTACCCGAATTCAATGCGTTTCGTACTTCGATGCGTACTCGCTCTCAATCGGTATCATTTGAAGAGCTTCATGTCCTGTT
AGTTTATGAGGAAGCAGCAATTGATAAACAGACCAAGCGCGATGAAGTCTTTGTTCAGTCTTCTACTCTTCTTGCGAACATGGCTACGAAAGATCAGAATTCTAATCCTA
ATATTTCGTGCGGTCGAGGTTTCAATGGTGGTGGTAAAGGGAAATTCCCTAACCCTAATAATCGATCCAAAATGGCCTCTCTGAGTACCACTGGTGGTAGAAGCCGTGAT
TCTTCAGGAACTGCTGTACCATTTGGAATTCAACCGAATTGGTCTGCTGATGAGCAAATTACTGTGGGCAATGGTCATTCTTTACCCATAACTCATTCAGGTTCTGGTCT
TTTACACACTTCTTCTTCCTCACTTGTTCTCAAACATCTTTCTTACTCACCTGATATTTCGTCCAATTTAATTTCTGTCTATCGACTTTGCCTTGATAACGATTGTTCCA
TAACCTTTAATGCTAATCAGTTTCTCATTCAAGACAACTCTTCGGGCCAGATTCTCTTTCAAGACCCCAGTATTAATGGGCTCTATCCCATTCACTCTGCTATACTTCCA
TCACATGATCAAATTCTATCTCGGCATAATGTTGCTCATGTTGGAGCTCGCACGTCCTCTTCAGTTTGGCACGATAGACTAGGTCATCCTAGTGAGTCTGTTCTTGCCTC
TGTTCTTTGTTCTATGAATCTATCATCATATACTACTTCTAAATGTGTTTGTATACACTGTCTTCATGGTAAAATGCATAGGCTATCTTTTCCTCAGTCAGTTACTGTTT
CATTGTTTGGTATGCTGAGTTCCAAGGTCTGTGCTACACCCATTGCACTTACTTCATCTGCTGTTGATACTAATCCTTGCTCTGATACCATGTTACAATCTTCCAAAATA
AGGAAGTGCTCTTCTCTTCCATTAATAAAAATGATCAAAATCCTCCATAGGATCAAAATCCAGTCAGAGGTCGATCAAGATCATCATCAAGCCAGAGGCCAATCAAAGCC
AGAGGCCAATCAAAGCCAGAGGCCAATCAAGATCATCATCAAGTCAGAAGCTGATAAGATCAACATCAAGCCAGAGGCCGATCAATATCATCATCAAGTCGCCAATACGC
TAATCAAGATCAACATGCTGCCAAGAGGCCGATCCAGATCAACACGCCGCTGA
Protein sequenceShow/hide protein sequence
MADSSQPPKDLSSSISCYGSTPKPVEFLVSSSDSSSSAPPAANPAFSEWIAKDHVLMTLLNAILSPLALAYVVGCDSSQQVWQTLVKHYSSSSRTNVDKLANVSVLVDNE
DLLIYTLNGLLPEFNAFRTSMRTRSQSVSFEELHVLLVYEEAAIDKQTKRDEVFVQSSTLLANMATKDQNSNPNISCGRGFNGGGKGKFPNPNNRSKMASLSTTGGRSRD
SSGTAVPFGIQPNWSADEQITVGNGHSLPITHSGSGLLHTSSSSLVLKHLSYSPDISSNLISVYRLCLDNDCSITFNANQFLIQDNSSGQILFQDPSINGLYPIHSAILP
SHDQILSRHNVAHVGARTSSSVWHDRLGHPSESVLASVLCSMNLSSYTTSKCVCIHCLHGKMHRLSFPQSVTVSLFGMLSSKVCATPIALTSSAVDTNPCSDTMLQSSKI
RKCSSLPLIKMIKILHRIKIQSEVDQDHHQARGQSKPEANQSQRPIKIIIKSEADKINIKPEADQYHHQVANTLIKINMLPRGRSRSTRR